Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->ATHB12                        <---------YAB1                    ----------->GT1                      <------ZmHOX2a(1)                   <---------ANAC46                  --------->LBD16            --------->LBD16           <------ZmHOX2a(2)          <---------DAG2      <---------ANAC58           ==================HOX2a_HOX2a   <---------LBD16<---------ANAC58<---------HSFB2a(2)      <- ----->MYB46(3) <---------LBD16<-------GAMYB<---------LBD16           <---------GLK1(1)           --- >NtERF2  <-----------ARR10   <---------ANAC58  ----------->HVH21     --------->GLK1(1)<---------TOE1(3) --->MYB52(1) --------->MYB52(1)      <----------DOF2    <-------TEIL --------->ARR14(2) <------ZmHOX2a(1) -->DEAR3(1) ----------->HVH21<---------ANAC58--------->LBD16     --------->YAB1       <---------TOE2(3)   cgacttggttccgatctaaccggaggatgatttcgttggactttttcccggtgaagaggttcgtgaaatcagaattctcgatcgagcttaaggaatttag  19147400                                                                                                    -                                                                                                    -                                                                                                    -                                                   --------->HSFB2a(2)                             --                                                   <---------HSFB2a(2)                            ---                                                  <---------LBD16                            ------>ZmHOX2a(2)         <----------DOF2          ------->TEIL <---------GLK1(1)                           <---------         <---------DAG2 <---------GLK1(2) <-------GAMYB                                    <---------ARR11(3) ------TEIL           ----------->ARR10  <---------ANAC46<----------DOF2 --------->ICU4    --------->ARR11(3) ------>CCA1(2)       <---------YAB1     <---------MYB46(3)         ----------->GT1    --------------   atacatgtagactttttggtagagatgattctcttgaacgttgtcgttgaattctgggactttgtagaattggtaaacatgaaaccagtcgatgatcttc  19147500                                                 ------>ZmHOX2a(1)                                                <---------MYB59                                               ------>ZmHOX2a(2) ------>NtERF2                                <------ZmHOX2a(2)                <---------MYB52(2) -------->ANAC58          XXXXXXXXXXXXXXXXXXXX>MIR826                         --------->ANAC58 -------->ANAC46        --------->WOX13(1)   <---------ARR11(3)               --------->ANAC46 -------->ANAC58    --------->WOX13(1)       <---------ARR14(2)               --------->ANAC58 ------->SPL7   ----------->GT1              --------->ARR11(3)               --------->ANAC55(1)   - --->ZmHOX2a(1) --------->AtLEC2             --------->ARR14(2)        --------->WRKY12        <----- --ARR10   <---------WRKY18(1)              <------ZmHOX2a(1)         --------->DOF5.7(2)      ------ --------->TaNAC69(2) <---------ATHB12 --------->MYB52(1)         --------->MYB52(1)           ------   ctacgccataacttgaccatgtaaatcaatccagttttgaataacaggatcctaactaagaacagagcaaacgttgacacaagtaacaagagaaacgaat  19147600     --------->GLK1(2)     --------->ARR14(2)     <---------ARR14(2)              --------->TOE2(3)                     --------->AHL20(2)    <---------GLK1(2)               ----------->GT1                   <----------DOF2 --------->DOF2        <---------AHL20(2)                           --------->LBD16 ----ARR14(2)          --------->AHL20(1)                          --------->ANAC46          >>>>>>>> --->ARR14(2)          --------->AHL20(2)<-----------GT1 <---------HSFB2a(2)          --------->MYB52(1) ->TEIL          ----------->GT1    <---------ANAC55(2)  --------->HSFB2a(2)<---------AHL20(2)   cccaaagaatccccatggagagaaataaaataagaaaaacgtaaaacctctctctggttccaaaactctccgctatattatatagtagtaacgaagaaga  19147700                                      ------->TEIL                                      <---------TOE1(2)                                   --------->ANAC58                                   --------->ANAC58                                 --------->MYB52(1)                                   <---------ANAC46              <---------YAB1 --------->ANAC58                                --------->ICU4  --------->ZAT18            --------->ANAC58                                <---------YAB1  <---------ZAT14      ---------->DOF2<---------TOE2(2)                 ----------->GT1            -- >TBF1 <---------TOE1(2)   ---------->DOF2                      ---------->DOF2      <---------LBD16   agagtttactaggtttattagagaataaagaaagcaaacgcatgttcggagaattgtgagaaaaaacaaagagagagtgattattttgacggagattgag  19147800                                                                                                   <-                                                                    --------->TOE2(3)              <-                                                               <---------AHL20(2)                  <-                                                             <---------YAB1                      ----                                                          <---------YAB1                        -----                                                       <---------AHL20(2)                       -----                                                       --------->ICU4                           -----                                                     <---------CCA1(1)       <---------YAB1   <------                                                     <---------RVE1(1)    <---------AHL20(2)  <------                                                    --------->ARR11(3)    <---------ATHB51    <------                                             <----------ID1 <---------AHL20(2)      <---------TOE2(3)                        --------->MYB52(1) <------ZmHOX2a(1)<---------AHL20(1)  <----------DOF2<-----          <------ZmHOX2a(1)    ---------->DOF2      <---------ARR11(3) --------->AHL20(2)  --------->DAG2 -------->DOF2   *TSS------------>CBF  ---------->DOF2 <---------YAB1  <---------AHL20(2)---------->DOF2   agaaagtttggaggaatattaagaacaatcggagaaagcctaaaaggacgacgagatattattatttttttcttaaattattctttaagaaaaaaggcgt  19147900         <-----------HVH21     <---------TOE1(1)     <---------TOE2(1)   ------>NtERF2 --------ANAC46 --------O2                                                                                       --- --------bZIP60(2)     ---------->DOF2                                                            --- ----->MYB52(1)       --------->YAB1                                                              --- ---->ALFIN1         <---------ATHB12                                              <---------WOX13(1) ------>HVH21      --------->WOX13(1)                                            --------->ATHB12 <-- ------>TGA1     --------->At4g35610                                            <---------YAB1    <-- ---ANAC58       ------------>CBF  --------->AHL20(2)------->GAMYB            <----------DOF2     <-- ---ANAC58<---------ZAT18        --------->ICU4   <---------DOF5.7(2)      --------->ARR11(3)     <-- ---ANAC46--------->ZAT18   ----------->GT1      ----------->HVH21         <---------ARR11(3)   ----- ------HVH21     <---------At4g35610<---------YAB1--------->MYB52(1)----------->HVH21<---------At4g35610   gacggggacgaggtcactcagcaatcaaaggggtgatttttataaatctaggtaacggcgatttagttgtttgacaagttctttgattgctgatttggaa  19148000        ---------->DOF2    <----------DOF2                                            --------->ATHB12 ------>ARR11(3)                                              <-------TEIL ------>ARR14(2)                  <---------AHL20(1)      <---------AHL20(1)                <-------- ------>ARR14(3)          ----------->GT1  <---------YAB1 --------->AHL20(1)      <---------AHL20(2) -------ARR14(2)        <-------MYC3    <---------YAB1    --------->ARR11(3)    <---------RVE1(1) -------GLK1(2)         ------->MYC3    --------->ICU4    <---------ARR11(3)    <---------CCA1(1) -------ARR14(3)       --------->O2  <---------YAB1----------->GT1             <---------GLK1(2) -------ARR11(3)       <---------O2  <---------AHL20(2)--------->AHL20(2)      <---------ARR11(3) ------>ARR10   <---------ATHB12  --------->AHL20(1)----------->GT1            --------->ARR11(3)   gattttcttttaaagctaataatccacatggcaaaaaatattattattagaagaagataaaatattcattagatttatagagatttttttgatactttgg  19148100                             <---------------AGL15                             --------------->AGL15                            ----------------->AGL3                            <-----------------AGL3                          <-----------GT1                      <---------AHL20(2)                     <---------AHL20(1)               ---------->DOF2                      --------->AHL20(1)                  --------->AHL20(2)              --------->AHL20(2)                       <---------AHL20(1)                  <---------AHL20(2)              <---------AHL20(2)                 ----------->GT1              <---------AHL20(2)                 --------->ICU4                     --------->ANAC58   --------->AHL20(2)--------->AHL20(1)     ----------->GT1                         --------->ANAC58 --DOF2       --------->AHL20(2)            --------->YAB1                 --------->AHL20(2)     <--   ctgaaaaaaattctaaaaaattatatatttactaattttagataaatagtaattaataaagcatttacattcggaacttaattaccaaggaaaaatatta  19148200         <---------ARR11(3)         --------->ARR11(3)        XXXXXXXXXXXXXXXXXXXX>MIR776    <------ZmHOX2a(1)            --------->HSFB2a(2)   ----------->GT1        <---------YAB1  --------->MYB59   <---------YAB1          --------->YAB1 -------ZAT6      <-----------GT1<---------HSFB2a(2)   <---------CCA1(2)              <---------YAB1-   gagttaggataaatcttctattactattctaatttctataaaccaaaaattatacgtttatctacaaaaaaaaaaaaactgagagaatattatggtctta  19148300  Previous    Next  AGI:  At2g46620.1    Description:  AAA-type ATPase family protein. similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT3G28580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24289.1); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain AAA ATPase, core; (InterPro:IPR003959) Range:  from: 19145871    to: 19147817    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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