Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------ETT(1)                                                       --------->ANAC58    ------>MYB46(1)                        <----------DOF2                           --------->ANAC46    ------>MYB83                      <-----------GT1<----------DOF2                 --------->ANAC58    --------->AtLEC2           ------>ZmHOX2a(2)<<<<<<<<<TBF1    <---------ALFIN1<---------ALFIN1  --------->AtMYB61           XXXXXXXXXXXXXXXXXXXXX>MIR831 <----------DOF2       ----------->RAV1(1)   aagaccatccaaacttccgaccaagaagcttgatcccttcttactctttcttcttctttctctttcaacactctaaaaaaccccaacacgaccctactaa  19133500                                                                                                    -                                                                                                    <                                                                                                    <                                       ----------->RAV1(2)                                      -----                         --------->ANAC58       ---------->DOF2                               <------                         <---------At4g35610   ------>ZmHOX2a(1)                            <--------                         --------->ANAC46  <---------ARR14(2)        <-----------HVH21      <--------                  <---------ATHB12     <---------ZAT2           ------->GAMYB              ----------           <---------YAB1--------->At4g35610 ------>ZmHOX2a(2) --------->MYB46(3)         <----------           --------->AtLEC2           --------->LBD16    --------->ATHB12                <------MYB46(1)         <---------ICU4  --------->ANAC58  --------->ARR14(2)<-----------GT1        <---------ICU4 <-         --------->YAB1<---------ALFIN1<---------At4g35610   --------->MYB52(1)     --------->ATHB12-        <---------ATHB12------->TEIL<---------LBD16     --------->ICU4   ---------->DOF2 <------MYB83      --------->YAB1 --------->AtLEC2 ------>NtERF2     <---------YAB1 <<<<<<<<<WRKY18  --------->MYB59   acactctctaatcatgctaaatcatgcacctcactaatcccggctgatcctaaagttgatgattaacgacctgtcaaaagaaatagtcattaggtcaccg  19133600                       <------MYB46(1)                       <---------ANAC46                       <------MYB83                      --------->MYB59                      --------->MYB46(2)                      --------->MYB111(2)                      <---------AtMYB61                      <---------MYB46(3)                <---------At4g35610              <---------WRKY38(1) <------MYB46(1)<------NtERF2 <------MYB83 <---------WRKY12 -------->MYB111(1)   --------->MYB111(1) ---------AtMYB61   <---------MYB52(1) ---------MYB46(3)<---------MYB46(3) ---->LBD16 <-----------HVH21 ---LBD16--------->ZAT14                     ----------->GT1                                     ---- -WRKY38(1)--------->WOX13(1)           --------->YAB1                                           <--- -WRKY12 =================================HOX2a_HOX2a                                            ---- ->HVH21--------->ARR14(2)     --------->ARR14(2)                                                <--- -HVH21 <---------ARR11(3)     --------->GLK1(2)                                                 <--- -------P<------ZmHOX2a(2)     <---------ARR14(2) ---------->DOF2             --------->At4g35610---- -------->MYB59 --------->At4g35610------>ZmHOX2a(1)   <----------DOF2   ---------->DOF2        <----   ggttggtccagatcagtcagcggtttggtagagaatcctgcatcataatgtataaagcttttactgattcaaaatcaaagagcagacactaactaagagt  19133700             --------->YAB1          --------->YAB1       <----------DOF2      --------------->AGL15      <---------------AGL15     ----------------->AGL3     ----------------->AGL2                                        <----------DOF2     <-----------------AGL3                                     --------->ANAC58    ---------->ID1                                              --------->ANAC58 ----->ARR11(3)                          --------->ANAC46   <-----------HVH21      --------->YAB1 --------ARR10               <---------ANAC58       --------->ANAC58               <---------ICU4 ----->GLK1(2)               <---------ANAC58       --------->ANAC58              <---------YAB1 ------ARR14(2)          <-------GAMYB   --------->ANAC58  --------->ANAC58   <---------DAG2 ------ARR11(3)         <-----------RAV1(1)      --------->WRKY18(1)    --------->ANAC46 ----->ARR14(2)         --------->ALFIN1 --------->ANAC58  --------->ANAC46   --------->TOE2(3) -----ARR14(1)          --------->MYB52(2) <----------CDC5 --------->ANAC58<---------ALFIN1   atctttctccttttatagtaactcgtgtgttgccttcaatctcacgctggggtcaagaaacaagtcacgctttcccaacaccttataatcactaatgtct  19133800                                                      ------>ZmHOX2a(1)                              --------->TOE2(3)    <-----------GT1                         <---------DAG2       <---------AHL20(1)                                    <                         <----------DOF2      --------->AHL20(2)       --------->ANAC46             <                      ------->TEIL            <---------AHL20(2)       --------->ANAC58             -                   <---------YAB1         --------->AHL20(2)           --------->ANAC58             -                 --------->YAB1           <---------AHL20(2)---------->ID1   --------->YAB1         -                 <---------ICU4------>ZmHOX2a(1)  <-----------GT1<-----------HVH21   --------->At4g35610                <---------ATHB12         --------->AHL20(2)<-----------GT1  ----------->TBP         <   ctgttcccaactctccaaatcatgaaacttttcctcaactctatttattttatttcctatttttcgccttcagacgctataaaaaccagttgcattaagc  19133900               --------->ARR14(2)               <-----------ARR10              <---------CCA1(2)          --------->TOE2(3)                                     ------>ZmHOX2a(1)          --------->TOE1(3)                            <-----------HVH21                           -- ---------ARR11(1)                                  --------->ZAT2                                 -- ---------ARR11(3)                                  ----------->RAV1(2)        <----------DOF2     -- -------->ARR11(3)                --------->AtLEC2  <---------At4g35610------>NtERF2               -- -------->GLK1(2)           <----------DOF2         <---------ZAT2    <---------RAP2.6(2)--------->ZAT14 -------->ARR14(2)      ---------->ID1              --------->At4g35610--------->LBD16   <---------ZAT18 ---------ARR14(2)      <---------CCA1(2)       <-----------HVH21    <---------LBD16     --------->ZAT18   agtatctttcaacctcaaatctccttgtctctttccattcaagatgaccagttcagctgtcccgtccttgttccggcttagctttctcttgttcactctt  19134000       ------->TEIL      <------NtERF2                        ------->GAMYB       <---------YAB1   --------->At4g35610                  --------->ANAC58    --------->ICU4      <---------At4g35610                  --------->ANAC58    <---------YAB1     <---------DEAR3(1)         XXXXXXXXXXXXXXXXXXX>MIR3434* ------->ANAC58   --------->ARR14(2)             <---------TOE2(3) ------->ANAC58  --------->ATHB12         --------------->AGL15      --------->TOE2(3) ------->ANAC46  <------ZmHOX2a(1) <---------GLK1(2)     --------->At4g35610            --------->YAB1 ------->ANAC55(2)<---------ARR14(2)   <-----------GT1  --------->ANAC46       ------>ZmHOX2a(1)<----   caagtaatgaatattggcaggattggcgctgcaactagattctaccaattcaaggtatcagcaacgcaaaatgttaacttcctattcaaattagaatcaa  19134100                                                                                  <-----------HVH21                                                                            <---------MYB46(3)                                                                         <-----------RAV1(1)                                                                         <---------MYB46(3)                                                                     <---------ZAT14                      <---------ANAC58                               --------->ZAT14                      <---------ANAC58  <----------DOF2        <<<<<<<<<<<<<<<<<LFY -----YAB1     <---------At4g35610<----------DOF2        --------->GLK1(1)<-------GAMYB             <   tattgaacacagttttcatctcatgcatgcctatttctttttcttttctctgtattcagatttctaaacagtggtctgttgttgtgtcactgatttttct  19134200                                                                                      --------->At4g35610                                                                                      <---------At4g35610                                                                                  <---------ARR11(3)                                                                                  --------->ARR14(2)                                                                                  --------->ARR11(3)                                                                                  <---------ARR14(2)                                                                                 <---------GLK1(1)                                                                           <---------DEAR3(1)                                                                           <------NtERF2                                                                      ----------->HVH21             --------->YAB1           --------->MYB52(1)      <---------ARR11(3) --------->GLK1(1)       --------->ANAC46              --------->TOE1(2)      --------->ANAC58 <------NtERF2    <-------TEIL                    --------->MYB46(3)      --------->ANAC58--------->LBD16 ----------->GT1                    <---------MYB52(2) <---------WRKY38(1)<---------LBD16 ---------------AtSPL8<-----------RAV1(2)           ------->GAMYB   ----------->RAV1(2)        ------   aacaggtacaaacaataagactcaccaggctatgccaaacaaacgagattgtaacagtcaacaagaaattccctggcccggcgatatctgctcaagaaga  19134300             ---------->DOF2                                                              --------->AHL20(2)           <---------YAB1                                             <---------ARR14(2)  <---------YAB1        <---------YAB1                                                --------->ARR14(2)  <---------AHL20(2)   <---------GLK1(2)                 --------->YAB1               ------->TEIL      --------->AHL20(2) --->At4g35610          <---------ICU4           --------->ATHB12 <-------TEIL  <-------TEIL     <---   tgacagaattgtcattaaagtcatcaacatgactccctataataccacaattcattggtatgccgatgtacatatacacatatacataaaatataaatgc  19134400  Previous    Next  AGI:  At2g46567.1    Description:  unknown protein Range:  from: 19133713    to: 19133823    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g46570.1    Description:  LAC6 (laccase 6); copper ion binding / oxidoreductase. Identical to Laccase-6 precursor (LAC6) [Arabidopsis Thaliana] (GB:Q9ZPY2;GB:Q8RY28); similar to LAC5 (laccase 5), copper ion binding / oxidoreductase [Arabidopsis thaliana] (TAIR:AT2G40370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14402.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75876.1); contains InterPro domain Multicopper oxidase, type 3; (InterPro:IPR011707); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Multicopper oxidase, type 2; (InterPro:IPR011706); contains InterPro domain Multicopper oxidase, type 1; ( Range:  from: 19133944    to: 19136141    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g46572.1    Description:  other RNA Range:  from: 19133944    to: 19136177    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version