Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->ZAT2                                                                        <---------ZAT2                                                                        <---------At4g35610                                                                --------->MYB52(1)                                                --------->CCA1(2)       --------->At4g35610                                               --------->ARR11(3)     <---------ZAT18           <----     <---------ARR11(3)                        <---------ARR11(3)  ------->GAMYB             <------- ------->ANAC58                            <------ZmHOX2a(1)    ----------->RAV1(1)      <-----------HVH21 ------->ANAC46 <---------ANAC58   --------->LBD16        --------->LBD16                <----------DOF2 ------->ANAC58 <---------ANAC58  --------->ANAC46       --------->HSFB2a(2)           <------NtERF2 >YAB1   ------->TEIL        <---------ATHB12  <---------ARR14(2) --------->MYB46(3) <---------DEAR3(1)   caaggaagatgtatcgaggcttacctttcaaatcacgcgcgaagaggaagatatagttcccagagccaacagcgagctcgcctacagacggcgttacagg  19132500                                                                              --------->LBD16                                                                              --------->At4g35610                                                                              <------NtERF2                                                                              <---------LBD16                                                                              <---------At4g35610                                                                          --------->ANAC46                                                                      <---------HSFB2a(1)                                                                      --------->HSFC1(2)                                              <---------ANAC46        <---------HSFC1(2)          <---------ZAT14               <---------ARR14(2)            --------->HSFB2a(1)          --------->ZAT18               --------->ARR14(2)           <-----------ARR10          --------->ZAT14              <---------GLK1(2)        <---------LBD16      --------->MYB52(1)            <---------HSFB2a(2)        <---------ANAC58       <------ZmHOX2a(1)     <---------ZAT14          --------->GLK1(1)            <---------ANAC58   ------>NtERF2     --------->ZAT14          <---------GLK1(1)----------->GT1 <---------ANAC46 --------->LBD16   --------->At4g35610      <------NtERF2   --------->MYB52(1) <---------ANAC58<------NtERF2  --------->ANAC58         --------->LBD16 ----------->HVH21   --------->MYB52(2)<------NtERF2<------  --------->ANAC58        --------->LBD16--------->At4g35610 <---------MYB52(1)<---------ANAC46------ --ZmHOX2a(1)            <---------LBD16--------->GLK1(2)  <---------DEAR3(2)--------->DEAR3(1)<----- ----RAV1(2) --------->At5g28300    --------->HSFB2a(2)    <---------ANAC58 <---------LBD16  <-------   agaccagcaaactgcagtaactggttcgccggaaacctctagaatctgacggaaaaatggtccgttcgtggaatcttcgccgcggagaggagaaggtaga  19132600                                                                                                    =                                                                                                    =                                                                                                    <                                 --------->ANAC58                                                   =                                 --------->ANAC58                                            --------                             --------->ANAC58                                                <-------                             --------->ANAC58                      --------->YAB1            --------    ----------->TGA1        --------->SPL7                        <---------ATHB12           <-------  <---------At4g35610      <---------MYB52(1)                   --------->WOX13(1)          <--------  --------->At4g35610     --------->LBD16                   --------->ANAC58             <---------DEAR3(1)  --------->CCA1(2)      <---------ANAC46                   --------->ANAC58        ================= -TEIL <----------ID1    <---------ANAC55(2)             <------NtERF2              ------>ZmHOX2a(2) --->At4g35610   <---------MYB46(3)   --------->ICU4    <---------HSFB2a(2) --------->ARR14(2)      = ----At4g35610  --------->ALFIN1 --------->ANAC46       --------->HSFB2a(2) <---------ARR14(2) ------ -P ----------->HVH21<---------HSFC1(2)                <---------LBD16     --------->ATHB12<------NtERF2   tgagagatgacgacgagagtggatgctccgtaagcaagccatgagtaattagcgaagtcgggaagccaatcaatagaagattgggatcgagtcggagctg  19132700      --------->GLK1(1)      <---------GLK1(1)                                                     --------->O2      <------ZmHOX2a(2)                                                ----------->HVH21     --------->ARR11(3)                                              --------->O2     <---------ARR11(3)                                              --------->TGA1a   --------->HSFB2a(1)                                               <---------O2  ------>NtERF2   <---------HSFB2a(1) <---------ANAC46                              --------->bZIP60(1)  <---------KAN4(2)    --------->ETT(1)                              <---------TGA1a =============HOX2a_HOX2a                                            <---------bZIP60(2) ====================HOX2a_HOX2a                                     <---------ANAC58 ------ZmHOX2a(1)     <---------LBD16           ------>ZmHOX2a(2)    --------->bZIP60(2) ============HOX2a_HOX2a <------NtERF2         <------ZmHOX2a(2)     <---------bZIP60(1) ->At4g35610      --------->At4g35610         --------->ARR14(2)     <---------ANAC46 --At4g35610  ------>ZmHOX2a(2)               <---------ARR14(2)     <---------ANAC55(2)   --------->ATHB12 ->ZAT2      <------ZmHOX2a(2)             ------>ZmHOX2a(2)         ================================ --ZAT2------>ZmHOX2a(2)--------->LBD16   <------ZmHOX2a(2)          <---------ANAC58  --------->ICU4 -ARR14(2)  --------->ARR14(2)           --------->ARR14(2)     ------>ZmHOX2a(2)  --------->LBD16 ======HOX2a_HOX2a<---------At4g35610    <---------ARR14(2)    <------ZmHOX2a(2)  --------->ANAC46 ===================HOX2a_HOX2a        ------>ZmHOX2a(2)      --------->ARR11(3) <---------LBD16 --->ALFIN1 <---------ARR14(2)     <---------ATHB12----------->HVH21 --------->ANAC55(2)<---------ICU4   gaggaacgatctccgatctgagttgccggagaggcaaatgatcgatccgatctgtgaccagtgagatcgcgacgtgactcgtctccggcataatcactgg  19132800                                                                               --------->SPL7                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                                                                               --------->PCF2                                                                             ----------->HVH21                                                                             <---------SPL7                                                                           --------->At4g35610                                                                           ----------->RAV1(2)                                                                        <------ZmHOX2a(2)                                                                       <---------ARR11(3)                                                                  <---------TOE2(1)                                                                  <---------TOE1(1)              <---------CCA1(2)                              --------->ZAT6<---------LBD16    ------->GAMYB                                            --------------->AGL15  <---------LBD16                       <---------YAB1      ----------------->AGL1         --------->ANAC46 <-----------GT1 --------->TOE2(3)   <-----------GT1       -------->P  --------->ARR11(3)  --------->ANAC58 --------->MYB52(1)               <---------AHL20(2)    <---------MYB52(2)--------->MYB52(1)       <- ===========MYC_MYB     --------->AtMYB61          --------->ANAC46   <------ZmHOX2a(1)    --------->ANAC58   ttttaacggaaaactcaaatcttagaccacaactatttttttccgattgtgctacacaacttaccagtacgaggatcaccggaccctcgttccaagccag  19132900                  --------->ARR11(3)                 <---------CCA1(2)               ------>ZmHOX2a(1)                                                                  <--             ------>ZmHOX2a(2)                                                      <---------AHL20(1)            <------ZmHOX2a(2)                                                       --------->AHL20(1)           --------->ARR14(2)           <------------CBF                            --------->AHL20(2)           <---------ARR11(3)      --------->ARR14(2)                               <---------AHL20(2)           <---------ARR14(2)      <---------ARR11(3)                              --------->YAB1----      --------->ZAT2               <-----------ARR10                            <---------ICU4   <---      <---------ZAT2               <---------ARR11(1)<------------CBF          --------->ICU4    <---      --------->At4g35610         <---------CCA1(2)<---------YAB1         ----------->GT1        ----      <---------At4g35610  --------->MYB59         ------>ZmHOX2a(1)   <---------YAB1 <---------ICU4 --------HSFB2a(1)<---------ARR11(3)   --------->ATHB12            <---------AHL20(2)<---------YAB1   aaggtttgagctggatcctatatctcatttaggcccatatctcattgggcctccttattgtatgtgtatttttatgatgtaaaaattataattccctaat  19133000                                                                         --------->ANAC46                                                                         --------->ANAC58                                                                         --------->ANAC58                                                                        ------>ZmHOX2a(2)                                                                        <---------LBD16                                                                       --------->CCA1(2)                                                                       <------ZmHOX2a(2)                                                                       --------->ARR14(1)                                                                      --------->ARR14(2)                                                                      <---------ARR11(3)                                                                      --------->ARR14(3)                                                                      <---------ARR14(3)                                                                      --------->ARR11(3)                                                                      --------->AGP1                                                                      <---------ARR14(2)                                                                     --------->GLK1(1)                                                                  --------->ANAC55(2)                                                                  --------->O2                                                                  <---------O2                                                              <-----------HVH21                                                           <------------CBF                                                         <---------AHL20(1)                                                         --------->AHL20(1)             <---------YAB1            <---------REM1(1) --------->AHL20(2)      <------------CBF              <---------ICU4       <---------AHL20(2)                  -------- -------AHL20(2)                   --------->ICU4  --------->TOE2(3)----------->ARR10        <------- ----->AHL20(1)                 <---------YAB1    ----------->GT1 <---------ANAC55(2)      <---------ANAC46 ------AHL20(2)        ----------->GT1<---------YAB1    <---------AHL20(2)            <-----------RAV1(1) ------AHL20(1)      <------------CBF<------------CBF   --------->AHL20(2)--------->LBD16 <---------At4g35610 ----->AHL20(2) --------->CCA1(2)  <---------YAB1 <---------ANAC55(2)<---------GLK1(1)--------->ALFIN1   ttaatgtgtattgtgaagatagaaattgtgaattttgattattgtagccaaaacgtaaataaattgtcacgagatccgcaaataagaagtgttgctgcta  19133100                                              <----------DOF2        <-----------RAV1(1)                          <---------TOE2(3)  <---------ANAC58      <---------ANAC46                          <---------------AtSPL8                  <---------MYB52(1)        ---------                --------->LBD16    --------->TGA1a               <---------ZAT14            ---------               --------->ANAC58    ======================================MYC_MYB            ---------               --------->ANAC46    <---------TGA1a          <---------YAB1                  ---------          ----------->ARR10 <------ZmHOX2a(1)<---------ANAC58   <-----------RAV1(1)         ---------     --------->ALFIN1 --------->YAB1        <---------------------WRI1                      <--------     <---------ZAT6  --------->AHL20(2)<-----------RAV1(1)--------->YAB1    <---------AHL20(2) ->At4g35610   --------->ANAC58    ======================bZIP_DOF<-------GAMYB  ----------->GT1  ---- --At4g35610  <---------LBD16  <---------ALFIN1          <---------YAB1 ----------->GT1     ---------   agaagaagtgttgagacccgcaaataataaggaacacacttgtgttggctttgctaactatgatgactgttgtgttgtttaatggaaaaaaaacacgtaa  19133200                                                                                --------->AHL20(2)                 <---------AHL20(2)                                       <------ZmHOX2a(1)                 --------->AHL20(2)                  <---------YAB1      <----------ID1 >ANAC58   <---------ANAC55(2)          --------->TOE2(3)               <---------TOE2(3) >ANAC55(1)--------->ANAC58            --------->ANAC55(2)        <---------------AGL15 >ANAC55(2)--------->ANAC55(2)         --------->ANAC46           --------------->AGL15 >ANAC58   --------->ANAC46            <---------ANAC55(2)       ----------------->AGL1 -->GT1   <---------TOE2(3)            <---------ANAC46          <-----------------AGL3 -ANAC55(2)--------->ANAC55(1)         ----------->GT1           <-----------------AG ----->ICU4--------->ANAC58           <---------TOE2(3)          <-----------------AGL1      <------- >ANAC46 <-----------GT1--------->AHL20(2)  --------->ICU4<---------ZAT18----------->GT1     --------   atatcagaaatttacgtaattaaaaatcaaataagaaatttacgtaaatatcagtatcagtggtcttacaatataaggaaaaaaaaattcagaaattaaa  19133300                                                                 ------->TEIL                                                              --------->ANAC46                                                              --------->ANAC58                                                              --------->ANAC58   --------->ANAC58                                                           <---------ZAT18       --------->ANAC58                           --------->AHL20(2)              <---------ZAT14  <---------bZIP60(1)                          --------->AHL20(2)               --------->ZAT18  --------->bZIP60(1)                          <---------AHL20(2)              --------->ALFIN1--------->YAB1                       --------->AHL20(2)               <---------ANAC58  <---------ICU4                      <---------AHL20(2)                <---------ANAC58 <---------YAB1 --AHL20(2)           --------->AHL20(2)          <---------ATHB12 <----------DOF2       ---------->DOF2 ->AHL20(2)       --------->AHL20(2)     <----------DOF2<---------ANAC46 --------->ICU4 <---------ATHB12   caaaatttagaagaaaaaaaaaaaataaataaataagagttctctttggcaaatgaaggcgtgcacgaacttttgatgatgacacgaccaataaagaatt  19133400  Previous    Next  AGI:  At2g46560.1    Description:  transducin family protein / WD-40 repeat family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO14396.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 19122443    to: 19132928    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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