Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <----------DOF2          ------>ZmHOX2a(1)              ------->TEIL                               <---------ARR11(3)  --------->YAB1            --------->WOX13(1)            <----------DOF2  ---------->DOF2 ---->ANAC58             --------->ARR14(2)              <---------DAG2  --------->ANAC58 ---->ANAC58             <---------ARR14(2)     --------->ZAT6           --------->ANAC58 -----RAV1(2)            --------->GLK1(2)    <-----------GT1     <---------TOE2(3) --------->GLK1(2)   gcaaaaatagtcctacaagatgaagagaatccatcagcaaatgtatattaacacaattgccttttgctaatgttcaagaaagacataatcttttgctact  19118400                                    --------->TOE1(3)                                  <---------YAB1                                    --------->TOE2(3)                        ---------->DOF2                                  <---------TOE2(3)               <----------DOF2   ----------->TGA1                           --------------->AGL15     --------->AHL20(2)    ------->GAMYB          --------->MYB52(1)      <---------TOE1(3)------>ZmHOX2a(1)     --------->ANAC58        --------->ARR11(3)----------------->AGL3  --------->TOE2(3)      --------->ANAC58 --------->GLK1(2)   tatacatggagataatggaagacatggttccaaattaagcttaatttcaactccttaaaatacactctctttgacaacccaaagaaatgacgattccgaa  19118500                                                                                --------->LBD16                                                                               <---------HSFC1(1)                                                                               <---------HSFB2a(2)                                                                           <---------GLK1(1)                                                                           --------->GLK1(1)        -            <-----------RAV1(2)        <---------YAB1                    <------ZmHOX2a(1)          -           <------ZmHOX2a(2)         <-----------GT1               ---------->DOF2     ----------->GT1     --------->CCA1(2)     <---------GLK1(2)                     <-------TEIL  --------->HSFB2a(2)---   tagagagatttggatcaggcatttctctatattctcaaattacaatcgagcaaactagctctatagattcaaagaggaattccagaaactagataaatcc  19118600         <---------------AGL15         <----------DOF2         ------>ZmHOX2a(1)         =============================HOX2a_HOX2a                             ------>NtERF2         ==================================HOX2a_HOX2a                    <---------ALFIN1     --------->ARR14(2)                          <---------YAB1          ------>MYB46(1)           --     <---------ARR14(2)                    <------ZmHOX2a(1)             ------>MYB83 --------->ANAC58    --------->GLK1(1)               ==============HOX2a_HOX2a    <-------TEIL--------->DEAR3(1)    --    <---------GLK1(1)               <---------MYB46(3)       <---------TOE2(3)--------->ABI4(1) ----- -------->ANAC58               <------ZmHOX2a(2) <---------TOE2(3)     --------->AtMYB61      ------- -------->ANAC58               ===================HOX2a_HOX2a<---------------AtSPL8   --------->ANAC58 ------->DOF2     ---------->DOF2   ------>ZmHOX2a(2)  <---------TOE2(3) -------->P ---------->DOF2==   caaagcaaatccttttctaagaaagagaatgcgatcgatcggtgaggaattaagattgagattagggttcataccaacaccgccgattaagcaagaagca  19118700                       <---------HSFB2a(1)                       --------->HSFB2a(1)                      ------->TEIL              --------->ANAC58              --------->ANAC46            ------>ZmHOX2a(1)          ----------->RAV1(2)        --------->ARR14(2)        <---------ARR14(2)                                <---------DAG2 --------->MYB46(3)--------->ANAC58                     <---------TOE1(2)       --------->TOE1(1) <---------ALFIN1  --------->ANAC58               <---------ARR14(2)           <---------LBD16 --------->RAV1(1) <---------MYB52(2)             --------->ARR14(2)           ------>ZmHOX2a(1)    - ------->RAP2.6(2)------>NtERF2          <---------WRKY18(1)         <-----------GT1        --------- ---->RAP2.6(2)------>NtERF2------>ZmHOX2a(1)   <----------DOF2    <---------AHL20(2)      --------->AtMYB61 -->At4g35610 --------->ANAC58          ----------->HVH21 <----------DOF2      --------->LBD16     <- =====================RAV  --------->TOE2(3)  <---------MYB52(1)   --------->AHL20(2)  <----------ID1   gccacaactggttcctgcgccacgaacatcctcaatttctccatgaccggcattttcgcactttccgattttaatctcttcctcggattacgaccaaagc  19118800                                                                      --------->ARR11(3)                                                                      <---------ARR11(3)                                                                  ---------->DOF2      <---------ANAC46                                                                 <---------AHL20(2)  <-----------HVH21                                                                 --------->AHL20(2)<---------MYB46(3)                                                           --------->ANAC58        <---------DEAR3(2)                                 --------->LBD16           --------->ANAC58     <---------MYB52(1)    <<<<<<<<<WRKY18              ------>ZmHOX2a(1)    ----------->HVH21         <-----------HVH21 ----->ZmHOX2a(1)              ----------->RAV1(2)  ----------->RAV1(2)      <---------LBD16 ->DOF2                 --------->MYB52(2)          <---------At4g35610   --------->At4g35610     <-- --------ALFIN1    <---------WOX13(1)    *TSS       --------->At4g35610<------ZmHOX2a(2)   <--------P   tcctcgtcaatgtctgattcgattgatagttgctcctgagtaaaccattttctcacctgaaacgaaattaaagatcatctccggtcgggtcgggttactg  19118900                                                      --------->AHL20(2)                                        <---------RAP2.6(3)                                        --------->LBD16                              <-----------GT1        <---------AHL20(1)                           <---------ICU4    <---------AHL20(2)   --------->ARR11(3)            -----                        --------->YAB1 --------->ANAC55(2)        <---------ARR11(3)           ------                  ---------->ID1      ---------->ID1 --------->AHL20(1)                      <-------                  ------>NtERF2  <---------DAG2     --------->AHL20(2)                       --------          ------------>CBF --------->YAB1--------->ICU4   <-----------GT1  <----------DOF2 <---------HSFB2a(2)         --------->ANAC58 <---------YAB1--------->At5g28300  ----------->GT1               --------->HSFB2a(2)         --------->ANAC58--------->AHL20(2)  --------->AHL20(2)  <---------CCA1(2)    <---------At4g35610 -------PCF2   --------->RAP2.6(3)<----------DOF2 --------->AHL20(2) <----------DOF2  --------->At4g35610   ggcccaaatgttcgcaattcggcccattataatcacctttgccgtaattaaaaaatatatatactgtatatctttctctttctcattctgcttccagcag  19119000                                                                         <---------ZAT14                                                                         --------->ZAT14                                                                       --------->ZAT14  <---------ICU4                                           <---------ARR11(3) --------->AHL20(2)        --------->ANAC58            ---------->DOF2 <---------ZAT14             <- <---------AHL20(2)        --------->ANAC46        ---------->DOF2   --------->ANAC46        <------- ---->At5g28300            --------->ANAC58 =======================HOX2a_HOX2a               <------- ----->GT1        <---------AHL20(2)        <------ZmHOX2a(1)   --------->ARR14(2)           -------- --At4g35610     --------->AHL20(2)      <---------HSFB2a(2)<------ZmHOX2a(2)         --------->CCA1(2) ->At4g35610    <---------AHL20(2)    --------->ARR11(3)   --------->ARR11(3) ----------->GT1--------   taaaaaattactaagtattttaaattttcaagaaatcgaagctctaggaacatgaaagaaagatcatatacactgtacagtagttaatatatgcagatat  19119100         ---------->DOF2             <---------ARR11(3)    ------->TEIL                     --------->ARR11(3) --------ANAC55(2)       --------------->AGL15                            ----------->GT1 --ARR11(3)              <---------------AGL15                     <------ZmHOX2a(2) --ARR14(2)  <---------GLK1(2)---------->DOF2                     <---------ARR11(3)     <-----------GT1 ->ARR11(3)  <---------ARR11(3)    ----------->GT1 <---------YAB1 --------->ARR11(3)  --------->YAB1 ->ARR14(2)  --------->ARR11(3)<---------TOE2(3)<---------YAB1---------->DOF2   --------->ANAC46   tacatgaacatgaaagatacttacttacacattaaagaagataatttcatatgatttttgaaggaaaagatcaaactagtaaacacaatattaacaaaat  19119200                                   ---------->DOF2                        --------->MYB52(1)                      ------>ZmHOX2a(1)                     --------->TOE1(3)<---------At4g35610                                        ----                     --------->TOE2(3)--------->At4g35610   <-----------GT1                 ---------          <-----------GT1    --------->GLK1(1)        <---------ATHB12                     --------->YAB1   tcttacaacaatttacattctctccttaacgaaatccaaaagctgattcgaagccaatcttttaactcatttcaacatcatcaagctgttcaatgagaaa  19119300  Previous    Next  AGI:  At2g46540.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK93335.1) Range:  from: 19117544    to: 19118841    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g46550.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G01240.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G01240.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G01240.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO14395.1) Range:  from: 19119061    to: 19121245    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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