Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    ------->MYC3                  <-------MYC2                  ------->MYC2                 --------->O2                 <---------O2                 --------->ANAC55(2)                 <---------ANAC55(2)                 --------->ANAC46                     --------->ANAC58                 <---------TGA1a                     <---------TOE1(2)             <-----------GT1                        <---------ALFIN1        --------->AHL20(2)               --------->AHL20(2)        --------->AHL20(1)             --------->ANAC58  <----------DOF2                            -        <---------AHL20(2)<---------AHL20(2)  <---------ARR11(3)                                   <-       --------->AHL20(2)--------->AHL20(2)   --------->ARR11(3)     <---------HSFB2a(2)     --------       <---------AHL20(2)<---------AHL20(2)  --------->RVE1(1)       --------->HSFB2a(2)    ---------    --------->YAB1<-------MYC3----------->GT1--------->CCA1(1)---------->DOF2    --------->TOE1(2) --   --------->ICU4--------->TGA1a       --------->ANAC58--------------->ANT --------->YAB1--------->ATHB12   <---------YAB1===================================================bZIP_DOF   <---------TOE2(3)   -- --------->YAB1  ----------->GT1       ----------->GT1--------->ANAC58  <<<<<<<ZML2 --------->MYB52(2)   gagttataattaaattaacacgtgaaaataaatagaaaaacaagaaaatatctcgcacgctttccaaagccctagaacaataacgttcgatggattggaa  19111300                                               --------->ANAC46                                              <---------HSFB2a(2)                                              --------->HSFB2a(2)                                          <-------MYC3                                          ------->MYC2              ------->GAMYB                                          ------->MYC3             --------->ANAC58                                         ===================================MYC_MYB                                         --------->bZIP60(2)       --------->ANAC58                                         --------->ANAC58         --------->RAP2.6(3)     --------->ZAT2               ----------->RAV1(2)            <-----------GT1     <---------At4g35610          <---------ANAC58     <---------STY1(2)     --------->At4g35610          <---------ANAC58    --------->ANAC58     <---------ZAT2          ------->MYC3==============================bZIP_DOF -------->RVE1(1)            <-------MYC3--------->ANAC58        --------->MYB52(1) --------ARR11(3)         <---------ALFIN1<-------MYC2--------->ANAC46    <-----------HVH21 --->GT1                 ==========================MYC_MYB     <---------MYB52(2)  --------->MYB52(1) -->GT1    <-------TEIL  -------->P      --------->TGA1a    ---------->DOF2    <-----------ARR10 ---- ------->GLK1(2)    --------->ANAC58   <---------ALFIN1--------->STY1(2)  --------->TOE2(3)      ---- ------->ARR11(3)   --------->ANAC58--------->ANAC46  --------->ANAC58  <------NtERF2            ----   aaatctctgctggtacattcacgagccaacacgtttgcctgccacgttccagacacaagctagaaagtaacggcatcgtcaaatctaacgagactcatca  19111400                                               <---------YAB1                                               <---------TOE2(3)                                             --------->YAB1                                            <---------YAB1                                         --------------->AGL15                                         <---------------AGL15                                     --------->ANAC58                                     --------->ANAC46                       <----------DOF2  <---------DAG2      <---------AHL20(2)             --------->ANAC58      --------->AHL20(2)           <---------ALFIN1         <---------YAB1       --------->AHL20(2) ----->ANAC58       <---------ARR11(3)  <-----------------AGL3  <-----------GT1  <---------AHL20(2) ----->ANAC58     XXXXXXXXXXXXXXXXXXXX>MIR837-5P    --------->ANAC58             --------->AHL20(1) ----->ANAC46 --------->TOE2(3)  <-----------GT1    --------->ANAC58            --------->AHL20(2)  <   aggaacaatttataaacatcaatttctttttggtttcacacgccttattatggtaagaaactatttttgcctattgaatgaaaaaaattgataagacata  19111500                                                                                                   <-                                                                                                 <---                                                                             <---------ALFIN1  ------                                                                         ------->GAMYB         ------                                                                      <-----------GT1          <-----                --------->ZAT14                                       --------->MYB52(1)       ------            ------>MYB83                                             <-----------GT1           <-----            ------>MYB46(1)                                         <---------AHL20(2)         <-----            --------->MYB52(1)                                     --------->YAB1              ------          <---------MYB59    <---------ANAC55(2)               <---------AHL20(2)             <------          <---------MYB46(2) --------->ANAC55(2)               --------->AHL20(2) <-------TEIL<------  <------ZmHOX2a(1)         <-------TEIL                     <----------DOF2<---------ETT(2)  <------ ---------TOE2(3)   <---------ZAT6                      <---------MYB52(1)  <---------ZAT18   -------   tgaaggatgagacctaactatagtcttaagtacataacatttactactactcaaaaccgttgtctttaattttaacggtccacattcgttctcacaataa  19111600 ----------GT1 ------WOX13(1)                                                           <---------O2 --->ATHB12                                                               --------->ANAC55(2) --->ATHB51                                                               <---------ANAC55(2) ---ATHB1                                                                 --------->ANAC58 -->ATHB1                                                                 --------->ANAC58 ----ICU4                                                                 --------->ANAC46 -------ATHB5                                                        --------->ANAC58 --->YAB1               ---------->DOF2                              --------->ANAC58 ---YAB1      <---------AHL20(2)----------->GT1                      --------->ANAC46 ---ATHB51    --------->AHL20(2)<----------ID1                     --------->MYB52(1) ---ATHB12<---------MYB46(3)   ----------->GT1                <----------ID1 -->ICU4<---------MYB52(1)   ---------->DOF2               --------->MYB52(1)                    <---   ttgaccatacgtttgtttaaatacttcaaaggaaaggaaaaacagcaagacgtttgtgaggtaatggacaaacgacacgtagtttgaaagatgagaagga  19111700                                      <---------ANAC58                                      <---------ANAC55(2)                                      --------->ANAC55(2)                                        <---                                      <---------ANAC46                              ---------->DOF2                                      <---------ANAC58                    ----------->GT1        ----                                   --------->ARR14(2)                    --------->LBD16      -------    --------->DAG2           <------ZmHOX2a(1)         --------->DAG2    --------->ANAC46     -------   ---------->DOF2  <------ZmHOX2a(1)*TSS--------->MYB52(1)<----------DOF2--------->LBD16     <------ -------ID1      <------ZmHOX2a(1) <---------ARR14(2) ---------->DOF2   <---------LBD16 ----------->GT1   agacaaaaaggcatagagaggaggaagagaaggagcggtttcgtaactgaaactgaaaaagctttaagagaaaacccggaaaaaaaaaaagagaaatatt  19111800                                                                                       ---------->ID1                                                                              --------->O2                                                                              <---------ANAC58                                                                              <---------O2                                                                              --------->TGA1a                                                                              <---------TGA1a                                                                              <---------ANAC46                                                                              =======================                                                                              =======================                                                                              <---------ANAC58           <----------DOF2                                                   <---------MYB52(1)  <---------ICU4                                                            <-----------HVH21 <---------ATHB12                                           <---------ICU4 ------->GAMYB    <-------- ------AHL20(2)                                            <---------YAB1  =============MYC_MYB ----->AHL20(2)              <----------DOF2    <---------TOE2(3)         ==============MYC_MYB -->AHL20(1)          --------->DAG2      ------->TEIL<---------ANAC46    --------->MYB46(3)--------- -->AHL20(2)       ---------->DOF2    <---------TOE2(3)    --------->ICU4 <------------AtMYB77   ---- ---AHL20(1)    --------->YAB1      --------->ICU4  <---------ANAC46    --------->MYB52(1)--------->DOF5.7(2)   ttaatcaattcttctttatcacaaagagtgcctttgtattaatgaattttgatgttgtgtaatgaatacagacataaccgtcgtgtctcgtcgttaaaga  19111900                          <----------DOF2                         <---------DAG2                      <-----------GT1                                     <---------ICU4                    <---------ANAC58                                      -------->HAHB4 ==bZIP_DOF         <---------ANAC58                                      --------->YAB1 ==bZIP_DOF --------->At4g35610                                          --------->ICU4    <---------ICU4 -DOF5.7(2) <---------At4g35610               --------->YAB1             <---------ATHB51  --------->ATHB12 ->DOF2 <-----------GT1-------->P          <----------DOF2         ----------->GT1        <---------YAB1 ----->CCA1(2)  <----------DOF2    <-----------GT1          <----------DOF2    <----------DOF2   aacgagagtttttcagctctttacttaccttttcttcttacccttctttcatgactcttcttctttgatgggttaataatgctttgagcttgatgatttc  19112000                   <XXXXXXXXXXXXXXXXXXXMIR156A-F                   <XXXXXXXXXXXXXXXXXXXMIR156G                              --------->At4g35610                <---------ZAT6                                              <---------At4g35610            <---------MYB52(1)                                   <---------ANAC58          ------>ZmHOX2a(1)                  <---------AHL20(2)  <---------ANAC46        <---------ANAC58         ---------->DOF2--------------------->WRI1  <---------ZAT2    <------        <---------ANAC46      --------->HSFB2a(2)                <---------ANAC58             -------        <---------ANAC58      <---------HSFB2a(2)             <---------DEAR3(1)            <--------   gattttagtttcctgttagtgtttgttttcttctgtaaagcttggattttttttggtttcttcgatggcgaatgtggaagctgatttcagaacatcaggt  19112100                                                                               --------->YAB1                                                                               <---------ICU4                                                                              <---------ATHB12                                                                              --------->ICU4 ---At4g35610                                                               --------->YAB1 -->At4g35610                           <----------DOF2 --------->DAG2  --------->ZAT6 ---RAV1(2)                          <-----------GT1   ---------->DOF2<-----------GT1    <---------ATHB12   gagttcaaattttgacttcaattttctcaagttttgaattttctttttctcttgggaaaaagtcaacatttttaactctaatcatgagccaaacaagctt  19112200  Previous    Next  AGI:  At2g46530.1    Description:  ARF11 (AUXIN RESPONSE FACTOR 11); transcription factor. Identical to Auxin response factor 11 (ARF11) [Arabidopsis Thaliana] (GB:Q9ZPY6;GB:Q0WMA6); similar to ARF18 (AUXIN RESPONSE FACTOR 18), transcription factor [Arabidopsis thaliana] (TAIR:AT3G61830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14392.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69513.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525); contains InterPro domain Auxin response fact Range:  from: 19111737    to: 19115403    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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