Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              ------>MYB46(1)                                                                                            ------>MYB83                                                                                          <---------MYB111(1)                                                                                          --------->MYB46(3)                                                                                          --------->AtMYB61                                                                                          <---------MYB111(2)                                                                                          <---------MYB46(2)                                                                                          <---------MYB59                                                                                        -------->P                                                                                        ------>MYB46(1)                                                                                        ------>MYB83                                     --------->TOE1(3)                             --------->ARR14(2)           ------->GAMYB             <---------MYB59                               <---------ARR14(2)          --------->MYB46(3)         --------->TOE2(3)                            ------>MYB83          <---------MYB55(2)       ------>MYB46(1)                                ------>MYB46(1)   --------->ZAT18          <---------ICU4               <----------DOF2        --------->AtMYB61 ------>DOF2--------->MYB52(1)     -------->P       <-------TEIL       --------->LBD16 ------>ZmHOX2a(1) >ZAT18  -------->P <-----------GT1------>MYB83--------->YAB1<----------DOF2   --------->ANAC46   aaaacagcactaaccaccgatttatcttcatcatcccaacctaaatcactcatattcatctttctttatctcccagattacaccaaatcctaccaaaccc  19100000                                                   <---------WOX13(1)                                                 -------->ATHB1                                                 <---------ICU4                                                 --------->ATHB12                                                 <--------ATHB1                                                 <------------ATHB5                                                <---------YAB1        <-----------GT1                         ------>MYB46(1)        <---------ATHB12 <---------ANAC58                         ------>MYB83           --------->ICU4   <---------ANAC46              <-----                       --------->AtMYB61        <---------ATHB51 <---------ANAC58              <-----                       <---------MYB59  --------->ANAC46       <---------YAB1                  ------                     >>>>>>>>>MYB2    --------->ANAC46    --------->MYB52(1)                   ------   aaaaccacttaaacggagaagaaaaccaaacctttcttctacacaactcaatgattgactcaacgatgcttgaaaccatataaactcgagtctctccagc  19100100                                                                      <------ZmHOX2a(1)                                                                     ----------->GT1                         <------ZmHOX2a(1)                       ------>MYB46(1)                  --------->GLK1(2)   <------NtERF2              -------->P       <---------HSFB2a(2)      --------->DAG2                   ----------->RAV1(1)    --------->GLK1(2)  <---------TOE2(3)  <----------DOF2        ------>MYB83 ----At4g35610   --------->ARR14(2) --------->ETT(1)            --------->MYB55(1)                --- ----ZAT2        <---------GLK1(2)<-----------HVH21             --------->ANAC46                  --- --->ZAT2        <---------ARR14(2) <---------DEAR3(1)         <---------MYB55(2)             ------- --->At4g35610--------->YAB1  ---------->DOF2                  --------->MYB46(3)          <---------YAB1   ttcaagattccagtaatcagattctaaggaagaaaaggtcggagctttgaacaatttgaagaatacccaccaggaaaaaatgcaaacccagtgatgaatc  19100200                   --------->LBD16                  <---------DEAR3(1)                  --------->DEAR3(1)                 <---------LBD16                 --------->ATERF1(1)                 <------NtERF2                <---------RRTF1(1)           <---------HSFB2a(1)           <---------ANAC58                  --------->HSFB2a(1)           <---------ANAC58   --------->ARR11(3)          --------->HSFC1(2)  <-----------ARR10          <---------HSFC1(2)  <---------ARR11(3)      --------->DAG2 ------>ANAC58  ------>NtERF2--------->RVE1(1)       ---------->DOF2 ------>ANAC58  <---------RAP2.3(1)  --------->DEAR3(1)   <----------DOF2 >TEIL   --------->GLK1(2)   --------->CCA1(1) --------->GLK1(2)<---------ICU4   acgctcaagagaagcttgcgccggtgaagaaatatctcgccgaagaaagattccaaaaagctttgatttttacagagaaattgaacaattgaatgagagt  19100300                                       <-------TEIL                                     --------->ARR11(3)                          <---------ANAC58                                     <---------ARR14(2)                          <---------ANAC58                               >>>>>>>>>TBF1       <xxxxxxxxxxxxxxxxsmallRNA(i)  <---------ANAC46                            >>>>>>>>>TBF1<---------ZAT6                         --------->ZAT2                <---------TOE1(3)    --------->ARR14(2)              <----------ID1      <-----------       ---------->DOF2   >>>>>>>>>TBF1--------->CCA1(2)             <------ZmHOX2a(1)  *TSS         <   tgcaactagaaaagtctgaaggttgaagaagaagaagaagatacagttagagagggagagagagagagaaggagacaagacttgctggggtaattgaagt  19100400                                                                                              <------                                   <---------ANAC55(2)                                       <-------                                   <---------ANAC46                               <---------ICU4                                   <---------ANAC58                               --------->ATHB51                         ------>MYB46(1)          <---------AHL20(2)              --------->YAB1                         -------->P<---------ANAC58  <----------DOF2              -------->HAHB4                         ------>MYB83          --------->MYB52(2)                 <--------HAHB4                        ------>MYB46(1)      <---------MYB52(1)                   <--------ATHB1               ----------->TBP    <-----------------------TaNAC69(2)             <---------ATHB51           <----------DOF2 --------->YAB1  --------->ANAC46                      --------->ICU4        --------->ARR11(3)--------->MYB46(3)--------->TOE2(3)                    --------->AHL20(2)    ---------->DOF2     ------>MYB83       --------->ANAC58                      <---------YAB1   <-- -CBF   <---------ARR11(3)<---------ATHB12 --------->ANAC58                   >>>>>>>>>GT-1  -------- ---------AtLEC2     --------->ANAC46     ------->TEIL                     ----------->GT1<---------YAB1   ttgtatgaaagctctttttaaaaacccaaccatggttacttatgcacgttaattactttggttattcaacttaaccatggttaataattactctgattat  19100500                                  <---------WOX13(1)                                 >>>>>>>>>ARR2               <---------ARR11(3)                                --------->ATHB12             --------->GLK1(2)                               <---------YAB1           ----------->GT1                     <---------ZAT18                <---------YAB1   --------->RVE1(1) ---ICU4             --------->ZAT14              ---------->DOF2   <---------ARR11(3) --YAB1              <---------ZAT14          --------->LBD16--------->ARR11(3) ---------GT1        --------->ZAT18  <-----------GT1  --------->CCA1(2) <----------DOF2            < ->ICU4   ------>ZmHOX2a(1)  <----------DOF2----------------->AGL3  --------->ARR11(3)           <---   taactctgtttcctgattttaagttcacttactttgattgtttctctccgaataaagatagaaaatctaaaatctcttttcaaatctattttgcaaatgg  19100600                                                           ---------->DOF2                                                       <---------ANAC55(2)                   <---------ANAC58                    <---------ANAC58                   <---------ANAC58                    <---------ANAC46             <---------ARR14(2)                        <---------ANAC58             --------->ARR14(2)                  <---------AHL20(2)                                --            <---------CCA1(2)             <---------ARR14(2)                                       <- -----------ARR10 --------->STY1(2)       --------->ARR14(2)                             <---------ZAT6 ------GLK1(2)    <---------STY1(2)---------->ID1--------->AHL20(2)           ----------->GT1  ------   attatctcacccctaaatctggctagtctttgaatttgtctccaaatccgattaatttcgtaaaagtaatacatacttgatggtgattttagtgaaacaa  19100700                                                ------->MYC4                                                <-------MYC4                                                <-------MYC3                                                ------->MYC3                                                ------->MYC2   <---------ANAC46                                                <-------MYC2   <---------O2                                               <---------ANAC55(2)                                               --------->ANAC55(2)                                               --------->O2    --------->O2                                               <---------O2    --------->ANAC55(2)                                               --------->TGA1a <---------ANAC55(2)                                               <---------TGA1a <---------TGA1a                                             <------------OsbHLH66                                          <---------ZAT18      --------->TGA1a                                          --------->ZAT18     ------>MYB83                                          --------->ZAT14     ------>MYB46(1)                                          <---------ZAT14   <---------MYB59                                          <---------REM1(2) --------->TOE2(2)     --------->YAB1           ----------->GT1              <---------ZAT18     --------->TOE1(2)  --------->YAB1 ------->ARR11(3)                       --------->ZAT14   ------->TEIL     <---------------AGL15 --------ARR11(3)                    <---------ANAC46 ------->TEIL         --------------->AGL15 --->MYB52(1)                   <---------ZAT6------------>OsbHLH66      <-------TEIL     ------->TEIL   cgatatttgcacttggtaaattttagagaaaatagtgttttgtgtacacacgtgtgtatgtacctacgtgagagattcaaattatagtaatgtacttaag  19100800                                                             <---------AHL20(2)                                     --------->ANAC55(2)     --------->ATHB12                                     <---------ANAC55(2)     <---------ICU4                                    --------------->AtSPL8   --------->ATHB51                                    <---------------AtSPL8   --------->AHL20(2)                               <---------AHL20(1)           --------->ICU4                               <---------AHL20(2)        <---------AHL20(2)                               --------->AHL20(2)        --------->AHL20(1)                --------->AHL20(2)                     --------->AHL20(2)                  --------->AHL20(2)               --------->AHL20(2)                     <---------AHL20(1)                 --------->AHL20(2)                --------->YAB1                     --------->AHL20(1)       <---------------AtSPL8          <-----------GT1      <------ZmHOX2a(2)        --------->AHL20(1)       <---------AHL20(2) <---------AHL20(2)--------     <---------ARR11(3) <---------AHL20(2)    --------------->AtSPL8   <---------AHL20(2)<---------ATHB12   aagtatagatcacatggtcgaaatattttaaaatttattatgtactaaatagtactaaattaattatttgtttttatttttttctctaccaataaaaata  19100900  Previous    Next  AGI:  At2g46510.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G01260.2); similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT1G01260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14389.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 19098025    to: 19100387    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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