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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
GLK1(2)
--------->
ARR14(2)
<----------
DOF2
<---------
ARR14(2)
------>
MYB83
--------->
GLK1(2)
------>
MYB46(1)
--------->
ARR11(1)
----------->
RAV1(1)
--------->
DREB2C(2)
----------->
ARR10
<----------
ID1
<---------
AHL20(2)
<------
ZmHOX2a(2)
<-------
TEIL
--------->
ANAC58
<-------
TEIL
------->
GAMYB
<-----------
ARR10
--------->
ANAC58
--->
ANAC58
--------->
DEAR3(2)
<---------
At4g35610
---------->
DOF2
--->
ANAC58
--------->
MYB46(3)
<---------
ARR11(3)
---------->
DOF2
---------->
DOF2
------>
ZmHOX2a(2)
aaaatgcataaataaacgaccgactttgagatcaaaatctaagcagattcgacaaaacatgaaagaccaaaaaaaagagaaagcaacaagatggatcgag
19057000
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
AGP1
<---------
ARR14(3)
--------->
ARR14(3)
<---------
GLK1(2)
------>
NtERF2
--------->
ARR11(3)
--------->
ZAT2
<------
NtERF2
<---------
ARR11(3)
<---------
At4g35610
------>
NtERF2
<---------
ARR14(2)
--------->
ARR11(3)
<---------
ETT(2)
--------->
ARR14(2)
<---------
ARR11(3)
--------->
ETT(2)
----------->
ARR10
----------->
HVH21
----------->
RAV1(2)
--------->
CCA1(2)
<---------
At4g35610
<-----------
ARR10
<---------
HSFB2a(2)
--------->
At4g35610
<---------
GLK1(2)
--------->
DEAR3(1)
--------->
LBD16
<<<<<<<<<
TBF1
--------->
At4g35610
---------->
DOF2
<-----------
HVH21
--------->
HSFB2a(2)
<<<<<<<<<
TBF1
<---------
ZAT2
agagaaagagtctctaac
ctgtcgccaacgagtttatacatccgagaaatgagatcttcttcttcttctgacatcttcacagcttcccattcgatactac
19057100
--------->
CCA1(2)
<---------
ARR11(3)
<---------
ARR11(3)
--------->
ARR11(3)
--------->
ARR11(3)
<---------
GLK1(1)
<--
<---------
MYB52(2)
---------->
DOF2
--------->
GLK1(1)
<---
--------->
ANAC46
<------
ZmHOX2a(2)
---------->
DOF2
<---------
LBD16
<---
tcacct
ctgcgaaacaaacatacaaaatcagactcaaaccgatcaaaaagatatagagagaaacaaagagaaatcagac
cttcggaacaagaagccttgg
19057200
--------->
ANAC58
--------->
GLK1(2)
---------->
DOF2
--------->
ANAC46
--------->
ANAC55(1)
------>
NtERF2
<---------
HSFC1(2)
--------->
ANAC58
--------
DOF2
<-----------
GT1
--------->
ANAC58
--------->
ANAC46
------
ANAC58
<------
NtERF2
<-----------
GT1
--------->
ANAC58
--------->
ANAC55(2)
------
ANAC58
<---------
DEAR3(1)
<---------
LBD16
--------->
HSFC1(2)
<---------
ANAC55(2)
--
ctttgctctgtctccgtcgtcgtttatccattttttccgccttgtctgaacgaaacat
cgaactaatctgaagacacgaaacacacagagaaagagagag
19057300
--------->
TGA1a
<---------
O2
<---------
LBD16
==================================
bZIP_DOF
---------->
DOF2
--------->
O2
<------
MYB83
<---------
TGA1a
<---------
ANAC58
------>
ZmHOX2a(1)
<------
MYB46(1)
<---------
ICU4
<---------
DAG2
<---------
HSFB2a(2)
--------->
ATHB12
--------->
YAB1
<---------
ANAC58
--------->
ICU4
----------->
GT1
<---------
MYB46(3)
--------->
HSFB2a(2)
--------->
GLK1(1)
<------
ZmHOX2a(1)
<-----------
RAV1(1)
--------
-------->
DOF2
<---------
HSFB2a(2)
<---------
GLK1(1)
--------->
ICU4
<----------
DOF2
--------->
HSFB2a(2)
agaaagagaataaatctcgagaaacaagaagaaatgatttcctcacgaggggaaggattaatagtagctttttttttgttgggttctcggaaaagaaaag
19057400
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
<---------
ICU4
--------->
ATHB51
--------->
ICU4
<---------
YAB1
<---------
ICU4
<--------
HAHB4
----------->
GT1
<---------
LBD16
--------->
YAB1
<----------
ID1
<-----------
GT1
--------->
ICU4
--------->
DAG2
<---------
AHL20(2)
--------->
AHL20(2)
<
--------->
ANAC58
--------->
AHL20(2)
--------->
YAB1
-----
--------->
ANAC58
<---------
YAB1
------>
ZmHOX2a(1)
<---------
AHL20(2)
*
TSS
---------->
DOF2
<---------
ICU4
<---------
HSFB2a(2)
<----
<-----------------
AGL1
--------->
ICU4
--------->
HSFB2a(2)
<-----
-->
DOF2
--------->
ALFIN1
---------->
DOF2
<---------
YAB1
<---------
WOX13(1)
<---------
AHL20(2)
agtgagagagagag
gggctcgaaaaggaaaagaaaatcaaactgattattatataactgcgcatgtctgattaatcctagaataattatttatttaatac
19057500
<---------
AHL20(2)
<---------
YAB1
--------->
ATHB51
--------->
AHL20(1)
<---------
ZAT14
<---------
MYB52(1)
<---------
AHL20(2)
------->
TEIL
<---------
ZAT6
<---------
YAB1
--------->
AHL20(2)
--------->
GLK1(2)
--------->
YAB1
--------->
ATHB12
--------->
ARR14(2)
---------
YAB1
--------->
AHL20(2)
<---------
TOE2(3)
--------->
At4g35610
--------->
ZAT14
---->
ANAC55(2)
<---------
AHL20(2)
<---------
AHL20(1)
<---------
ARR14(2)
<---------
-----
ANAC55(2)
--------->
AHL20(2)
--------->
AHL20(2)
---------->
DOF2
--------->
ZAT14
<----
----
ICU4
------>
ZmHOX2a(1)
<---------
WOX13(1)
<---------
At4g35610
<---------
ZAT14
<--------
ttatcatcatcctccattatttaaatattgactgattaagaaataatataattcgattgagctaaagaaaacgaatctgtaaactgtagtgtttcactgt
19057600
-----
<------
<--------
--------->
TOE1(3)
<--------
<---------
MYB52(1)
--------->
TOE2(3)
<--------
------->
GAMYB
--------->
YAB1
<---------
LBD16
--------->
MYB46(3)
--------->
AtMYB61
<---------
ANAC58
--------->
MYB52(1)
<-------
TEIL
<---------
ANAC58
<---------
ANAC46
--------->
CCA1(2)
--------->
WRKY12
<-------
GAMYB
<----------
DOF2
<---------
ARR14(2)
<<<<<<<<<<<<<<<<<
--------->
ALFIN1
<----------
DOF2
----------->
RAV1(1)
------>
ZmHOX2a(1)
--
GT1
<-----------
RAV1(1)
--------->
ANAC58
--------->
AHL20(2)
<<<<<<<
-----
ANAC46
<---------
ANAC58
--------->
ANAC58
<---------
ICU4
<----------
DOF2
-
At5g28300
<---------
ANAC58
---------->
DOF2
--------->
ARR14(2)
<---------
AHL20(2)
<-------
gtgtgtgtgtgtgttgcttccaacggcctttagttcatagagaaagaagaacgacagatacaaccataactacttattttaaatcctttgacttgcggtt
19057700
<---------
ICU4
<----------
DOF2
--------->
ICU4
<---------
ANAC58
------>
GT1
<---------
ANAC58
-
GAMYB
<---------
ANAC46
-
ANAC58
<---------
ANAC58
-
ANAC46
<<<<<<<<<<
AtWER
------>
ZmHOX2a(1)
-
ANAC58
------>
ZmHOX2a(1)
<---------
ANAC58
<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<
AtWER
<<<
AtWER
>>>>>>>>>
TAC1
<---------
HSFC1(2)
----------->
HVH21
--
MYB46(3)
<-------
GAMYB
--------->
HSFC1(2)
<----------
DOF2
<------
gtaaaaattcctcgtttacagacagttggagaaatagtagcttctcctctggctttgactttcgaaatgaccagtatgtcccttatatgtgttcttgttt
19057800
<-----------
HVH21
--------->
MYB52(2)
<---------
AHL20(2)
<---------
MYB46(3)
--------->
TOE2(3)
---------->
DOF2
<-----------
GT1
--------->
ATHB12
<-----------
GT1
<-------
TEIL
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
YAB1
<-----------
RAV1(1)
------------------
ANAC81
<-----------
GT1
--------->
AHL20(2)
--------->
YAB1
<-------
TEIL
ctagtttatttgctattctacattaaatatacattctgtcaaagctacttatttaaaaatataactattcaacaataacaaaaaaattcatttgttgcaa
19057900
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AGI:
At2g46410.1
Description:
CPC (CAPRICE); DNA binding / transcription factor. Identical to Transcription factor CAPRICE (CPC) [Arabidopsis Thaliana] (GB:O22059); similar to TRY (TRIPTYCHON), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G53200.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77791.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778)
Range:
from: 19056245
to: 19057414
Orientation: Reverse
Links:
TAIR
MIPS
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publications
when using AthaMap.
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