Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------YAB1       ----------->HVH21   <---------At4g35610                                                                   --------->LBD16   --------->ZAT2                            ----------->RAV1(1)                         ------>ZmHOX2a(1)   <---------ZAT2                       <-------GAMYB           --------------------->WRI1  ----------->RAV1(1)---------->DOF2   <-----------RAV1(1)  <----------DOF2         <----------DOF2 ->ARR14(2)    --------->TOE2(3)<---------ANAC58      --------->TOE2(3)         <---------MYB52(1) -CCA1(2)     --------->YAB1    <---------ANAC58      --------->TOE1(3)       --------->ANAC46   tctccagcagtgaccatcatcaatagagccattttcttgttctgttgcaacaaaaaccttaactttctctgtgttcttctccgatactttcctgaaaatc  19051500                          --------->O2                          <---------O2                                    --------->At4g35610                          ================================bZIP_DOF        <---------At4g35610                          <---------TGA1a                            <----------DOF2    <----------DOF2                          --------->TGA1a                         ------>MYB83          <---------DAG2                <------ZmHOX2a(1)                    <----------ID1<---------ATHB12  --------------->AGL15         --------->MYB52(1)                    ---------->DOF2    ------>MYB46(1) <-----------GT1   accaaaaaaaaaaacagaggaatcagacacatgagcacagtttggaactgaaagagagacaaaaaaccaatcttttagctcaatttacctctttttgaag  19051600                                                                                                    -                                                       <---------MYB46(3)                          --                                                    <---------ANAC58                               --                                               <---------ANAC58                                    <-                                               <---------ANAC58                                    <-                                           --------->HSFB2a(1)                                    <--                       =========================HOX2a_HOX2a                                       ===                       ------>ZmHOX2a(2)   <---------HSFB2a(1)                              <--------           <----------DOF2               <------ZmHOX2a(1)    --------->At4g35610         --------->ARR14(2)        --------->GLK1(2)              <---------TOE2(3)      <---------At4g35610         <---------ARR14(2)        <-----------ARR10              <---------TOE1(3)<-------GAMYB                ----------->GT1<       <---------GLK1(2)            <----------DOF2 <---------ANAC58                <---------HSFB2a(2)   acgtttttagaatcttttccatcgatctcaaggcttcgcttaaggatgttcttgtcttggttgaagctcaacatgaaaatggcattctggtaaatacgga  19051700            <---------TOE2(3)         <------ZmHOX2a(2)        --------->ARR11(3) -------->GLK1(1) ------->ARR11(3) ------->ARR14(2)                                                           <----------DOF2 --------ARR11(3)                                                        --------->ARR11(3) --------ARR14(2)                                                        <---------ARR11(3) ----ZmHOX2a(1)                                                        --------->ANAC58 ===============HOX2a_HOX2a                                            --------->ANAC58 -LBD16--------->GLK1(1)                                   --------->WOX13(1) ---------GLK1(1) <-----------RAV1(1)          <---------TOE2(3) <---------MYB52(1)             -----   ggatatcagagatcaaggttttgttggaatcgacagaagaagtgtgtttgagattgttcatcaatcggttagcaagctctttccctagttccaattcgtt  19051800                                                               <---------ARR11(3)                                                               <---------GLK1(2)                                                               --------->ARR11(3)                                                   --------->GLK1(2)                                                   --------->ARR11(3)              <------MYB83                         <----------DOF2           <-----------ARR10               <------MYB46(1)                        <---------ICU4             <---------ARR11(3)             <---------AtMYB61                       <---------YAB1             <---------GLK1(2)       <---------ANAC58                  <---------ICU4                <---------TOE2(3)         <---------ANAC58         *TSS ---->WRKY38(1)   --------->YAB1     --------->ZAT14  <----------DOF2<----------DOF2  <---------MYB46(3)   gatcacaagtttctcttccatcatcatctttgcattcacttcagaaaattaagaatcttttcttagattttcttttgagtgagattggtgggagatgtga  19051900                                                                                              <------                                                                                           <---------ICU4                                                                                        <---------AHL20(2)                                                                                       <---------AHL20(2)            --------->GLK1(2)                                                          --------->AHL20(2)            --------->ARR11(3)                                                    --------->ANAC55(2)            <---------ARR14(2)                      --------->YAB1                <---------ANAC55(2)            --------->ARR14(2)   <---------YAB1    <---------YAB1           ------------>CBF <------- <---------ANAC58        <---------AHL20(2)   --------->GLK1(2)   ------>ZmHOX2a(1)--------->ICU4 <---------ANAC46      <-----------TBP       <---------GLK1(2)   <---------ANAC58--------->YAB1 <---------ANAC58     ------->TEIL    --------->ATHB12           <---------ANAC58<---------ICU4 <----   gtttcgtctgtgagtatctagatgtatttatagacatgaatgatggagattctatgatggtactcgtccttgtgcttagacaataagtattaatttttat  19052000                                                        ------>ZmHOX2a(2)                                                       <------ZmHOX2a(2)                                                      --------->ARR14(2)                                                      <---------ARR11(3)                                                      --------->ARR11(3)                                                      --------->GLK1(2)         --------->ATHB12                            <------ZmHOX2a(1)         --------->ATHB51                           <---------HSFC1(2)      <---------AHL20(2)                            --------->HSFC1(2)     --------->AHL20(2)                     ---------->DOF2     --------->ICU4                   <---------ANAC46<---------ARR14(2)              <---------YAB1 ---AHL20(2)                          <---------ANAC58--------->ARR14(3)    --------->DAG2          < --YAB1 <---------YAB1                <---------ANAC58<---------ARR14(3)   ---------->DOF2<---------ZAT6 -----YAB1                           <-----------------------TaNAC69(2)    --------->MYB52(1)  <-----   ttttgtatttattattggtttcaatcttcgaccagaagttgtgtggaaaagagaaggatcttggagagaaattgacataaaggagactattagtgtttca  19052100                                                                     <---------AHL20(2)                                                                    --------->AHL20(1)                                                                    <---------AHL20(1)                                                                    --------->AHL20(2)                                                          <---------ICU4                                                         <---------AHL20(2)                             ----------->GT1             --------->AHL20(2)                        --------->AHL20(2)               <---------AHL20(1)       <---------AHL20(2)<---------AHL20(2)              --------->AHL20(1)                   ------- ----------DOF2     --------->AHL20(1)                --------->AHL20(2)                      <------ ------GT1          <---------ARR11(3)            ---------->ID1    <---------AHL20(2)        <------   ctctttttttatattgctagaatatataaaatagtataaaactgctaaatttgtcttaaaatattacaaataaaattggaatgttttagtctaggggtta  19052200                                                            <---------CCA1(2)                                                        --------->ICU4                     --------->AHL20(1)                                                      --------->YAB1                  --------->AHL20(2)                                                     <---------YAB1     <-----------GT1    <---------AHL20(1)                                                   --------->YAB1     <---------YAB1 <---------ICU4 -->ARR14(2)                                 --------->ANAC46        <---------AHL20(2) --------->AHL20(2) --P <---------YAB1                          --------->ANAC58      <---------YAB1   --------->ICU4 ---ARR14(2)   --------->AHL20(2)            --------->ANAC58  --------->TOE2(3)  --------->YAB1   ctcgtttctgataaaaaaaaaatgtagttgctaattccatacctattaagcaactataattcttatcttattattttcggtctataatttttatatatta  19052300                                       ------->GAMYB           --------->YAB1             <------------MYB.PH3(2)     <---------ARR14(2)          <---------YAB1              <---------MYB52(2)       --------------->AGL15          <------         <---------ARR11(3)           <---------MYB46(2)       <---------------AGL15         <-------         --------->ARR11(3)          --------->At4g35610      <-----------------AGL3      <---------MYB52(1)        -------->HAHB4               <---------At4g35610      ----------------->AGL3     <-------GAMYB        <---------ICU4             <---------WRKY12--------->TOE2(3)                    <------MYB83        --------->YAB1            --------->DOF5.7(2)         <-----------------AGL2    <------MYB46(1)       <---------ATHB12          <-----------HVH21 --------->YAB1<---------CCA1(2)      <---------DEAR3(2)       --------->ICU4            --------->TOE2(3)<---------ATHB12--------->ARR14(2)    <---------MYB46(3)   gacagactaatgatcatatcaagttatctataaatcgtcaactaactccccaatcttaatagaacccatatatggtgagtctcactaagtcggttaagct  19052400  Previous    Next  AGI:  At2g46400.1    Description:  WRKY46 (WRKY DNA-binding protein 46); transcription factor. Identical to Probable WRKY transcription factor 46 (WRKY46) [Arabidopsis Thaliana] (GB:Q9SKD9); similar to WRKY53 (WRKY DNA-binding protein 53), DNA binding / protein binding / transcription activator/ transcription factor [Arabidopsis thaliana] (TAIR:AT4G23810.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39738.1); similar to putative WRKY transcription factor 30 [Vitis aestivalis] (GB:AAR92477.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 19050487    to: 19051899    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version