Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------ANAC46                                                               <------MYB83                                                              --------->MYB46(2) <---------MYB46(3)                                                              --------->MYB52(2)<---------AtMYB61                                                              --------->MYB59   <---------DEAR3(1)                                                              --------->MYB111(1)----------->GT1                                                              --------->MYB55(2)--------->MYB111(1)                                                          <---------ZAT6        <---------MYB46(3)                                                     --------->YAB1             --------->MYB55(2)                                                     <--------ATHB1             --------->MYB111(2)                                                    <---------YAB1           <---------MYB46(3)                                                    <---------ATHB51    --------->ZAT18    <----------DOF2       <---------ANAC46        --------->YAB1  <---------MYB46(3) ------MYB83              <---------ANAC55(2)    --------->ZAT6<------MYB46(1)  --------->MYB46(2) ------MYB46(1)           --------->ANAC55(2)   <---------TOE2(3)--------->ALFIN1<------MYB83 -------ANAC58            <---------ANAC55(1)  --------->YAB1 --------->MYB111(2)<------MYB46(1) -------ANAC58   --------->ARR14(2)         --------->TOE1(3) <---------AtMYB61<--------P      ------ -------ANAC46   <---------ARR14(2)         --------->TOE2(3)<---------MYB55(1)<---------MYB55(1)   gctggtctttagtatgccaaatcccattatgtgttttccctaataacattaacaataatagtgttaggtggtagtaccctggttggtgaaatgctaatgg  19022500                                                     <---------MYB46(3)                                                  <------MYB46(1)                                                  <------MYB83                                              --------->At4g35610                                              <---------ZAT2                                         --------->ANAC58                                         --------->ANAC46                                         <--                            <---------YAB1    --------->ZAT2                                      ---                          <---------ICU4 --------->ANAC58                                      <-----                         --------->ICU4------>ZmHOX2a(2)                                    ---------                 --------->YAB1<---------YAB1 <---------At4g35610                           ------>ZmHOX2a(1)      <--------ZAP1   --------->ZAT6 --------->ARR11(3)      <---------YAB1             <---------ALFIN1 ----->GT1    ---------->DOF2<-----------GT1 ------>NtERF2<---------YAB1             --------->ARR11(3)   tgaaactgggtcaatataaagataacacttattactactgatctcgccagcttggtggttctcattcttgtcttcacaaacatataagaccctcctcaca  19022600                                                              <------MYB83                          --------->YAB1                      <------MYB46(1)                         <---------YAB1                      --------->MYB59                       --------->AHL20(2)               --------->AHL20(2)                       --------->YAB1--------->ICU4     <---------AHL20(1)       --------->ANAC46                      <---------ATHB12                  <---------AHL20(2)      --------->RAP2.6(3)                      <---------ATHB51--------->ATHB12 --------->AHL20(2)      --------->MYB52(1) -----MYC3         --------------->AGL15           <---------ARR11(3)    --------->TOE1(3) ---->MYC3         <---------------AGL15           --------->AHL20(1)    --------->TOE2(3) ----ALFIN1   <----------DOF2   --------->YAB1     <---------AHL20(1) --------->ANAC58           ---- -->HVH21 <---------GLK1(2)<---------AHL20(2)      --------->AHL20(2) --------->ANAC58<------NtERF2--   cgttgatgaactgattcttttccaattataaaaatcgtaatctttggtcacaaaatattaaatttggtcttcaagccttaaaaacggcagagattacatc  19022700             --------->DEAR3(1)  <---------ANAC55(2)  ----------->GT1                                    <-----------GT1  --------->ANAC58                                 <-----------HVH21  --------->ANAC58                                --------->ALFIN1 ----->WOX13(1)      <---------YAB1            --------->DAG2                ----------->GT1 ------->WRKY18(1) <----------DOF2           ---------->DOF2         ------>NtERF2                  -   agtcaagtaaaaacagcgacgcttttattgatcaaactcattctagcaaaaggtgttacaggcccatatgaggcccataatgtgaaaacaaggcttagtc  19022800               ----------->GT1                                                   --------->ANAC58             <---------ZAT14                                           --------->ATHB12             --------->ZAT14                                          <---------YAB1            --------->ALFIN1                                       <---------MYB46(3)  <---------MYB52(2)       <------NtERF2                                              <--------P     --------->ANAC58   -     <-----------RAV1(2)                  <---------ZAT6          <---------WOX13(1)   --------->MYB46(3)  --------->ANAC46                  ---------->DOF2              <-------GAMYB  ------->TEIL     ---- --------->RAP2.6(3)            --------->ANAC58                <---------MYB46(3)    *TSS       ---- -------->MYB52(1)              --------->ANAC58             <----------DOF2 <---------YAB1 <--------   aaaaacggcagggagtgtggtcaaaagttttgaaacggcaaagagtgttagtatgtgttttgtctttggttgatgatttatgaacggcaacgaatcacct  19022900                                                                            --------->ANAC58                                                                            --------->ANAC46                                                                            --------->ANAC58                                                                           --------->SPL7                                                                        --------->AtMYB61                                                                       --------->MYB46(3)                                                                       <---------ATHB12                                                                      -------->P                                                                      ------>MYB46(1)      ----------                                                                      ------>MYB83 --------->TOE1(2)                                                                      =============================MYC_MYB                                      --------->ANAC58               --------->MYB55(1)  <---------ANAC46    <---------GLK1(2)                 --------->ANAC58              --------->MYB46(3)   <---------O2    --------->ARR11(3)                --------->AtLEC2              <---------MYB111(1)  --------->O2    <---------ARR11(3)     --------->ARR14(2)      --------->ANAC58 --------->DEAR3(1)   --------->TGA1a  ----------->ARR10        <---------GLK1(2)      <---------GLK1(1) <---------MYB55(2)   <---------TGA1a -------->LBD16    <----------DOF2    --------->ANAC46              <---------MYB46(2)----------->HVH21 -->MYB83      <----------DOF2    ------>ZmHOX2a(1)--------->ANAC58 --------->AtMYB61--------->SPL7 -->MYB46(1)<------------------------ANAC81      ==================================================bZIP_DOF ---GT1 <-----------GT1    <---------ARR14(2)    ---------->DOF2    <---------MYB111(2)  ----------->GT1   tccgaagatttttcttcctttcttttttggattctcctccatgcaaaattggaaagccctaagacgaacaccaaccatacgccatcgtgcgacgtgaaaa  19023000                    <------ZmHOX2a(1)               ----------->HVH21             --------->At4g35610          <---------WOX13(1)                                         <---------MYB46(3)      ------>ZmHOX2a(1)        --------->ATHB12                                         ------>ZmHOX2a(1)          ---------    <-----------ARR10                           ------>ZmHOX2a(2)================================HOX2a_HOX2a    --------->GLK1(2)                           ========================HOX2a_HOX2a        ------>ZmHOX2a(2)    --------->ARR14(2)            ---------->DOF2                =================================HOX2a_HOX2a    <---------ARR14(2) --------->ATHB12     <---------YAB1     ----------------->AGL1     <------ZmHOX2a(2)   <---------GLK1(2)===================================HOX2a_HOX2a  <---------AtMYB61    --------->ARR14(2) ->GT1 <---------YAB1 <---------YAB1  --------->ARR11(3)     <-----------GT1             <---------ARR14(2)   ttggagaatctgattggctgaaggattattgaaattgaaagttattgtgatcgagttttgttttttcctgatggtggaagaagcacaattggatcctaaa  19023100                                                              <----------DOF2                                                            ------>NtERF2                                                           --------->DEAR3(1)                                                           --------->RRTF1(3)                                                           --------->RAP2.3(2)                                                          --------->ORA47(2)                                                          --------->ATERF1(1)                                                          --------->DEAR4(2)                                                          --------->RAP2.3(1)                                                          <------NtERF2                                                         <---------ORA47(2)                                                         ------>NtERF2                                                         <---------ATERF1(1)                                                         <---------RAP2.3(1)                                                         <---------DEAR4(2)                                                         <---------RRTF1(1)                                                        --------->DEAR3(1)                                                        <---------RAP2.3(2)                                                       <------NtERF2                                                       <---------ABI4(2)                                                       --------->ATERF1(1)                                                       --------->RAP2.3(1)                                                      <---------ATERF1(1)                                                      <---------DEAR4(2)                                                      <---------RAP2.3(1)                                                     <---------DEAR3(1)                                                    <------NtERF2                        ------>ZmHOX2a(1)                                                    --------->ATERF1(1)              <---------ARR14(2)                                                   <---------SPL7                    --------->ARR14(2)                           >>>>>>>>>SARD1          --------->LBD16                  --------->WOX13(1)                           >>>>>>>>>CBP60g        <---------ANAC46         <-----------HVH21                   --------->GLK1(2)     <----------DOF2<---------DEAR3(1)<---------MYB46(3) >TOE2(3)      --------->YAB1     ---------->DOF2<---------LBD16         <---------DEAR3(1)   tcgaaatcgattccgaatgagaatttgaaatttggagaaagggctttgtctgccggaggcgccgcttttatatcggcggtcatagtcaatcctctcgatg  19023200                                                                                         --------->ICU4                                                                                      <---------YAB1                                                                             <---------------AGL15                                                                             <----------DOF2<--------                                       <----------DOF2                  <---------At4g35610 ---------                  --------->YAB1      <---------ANAC58      <---------ARR11(3)      ----------->GT1          ---------->DOF2      <----------DOF2              --------->ARR14(2)      --------->YAB1       <-------TEIL            <---------DAG2               <---------ARR14(2)  <---------AHL20(2)   <---------TOE1(3)        <---------ALFIN1                --------->GLK1(2)--------------->AGL15   <---------TOE2(3)   <-----------GT1<---------ANAC58      --------->ARR11(3)  <---------YAB1   ttgttaaggttcgaaagtaaacatatttccacactttttggctttggaaacttgtctgcgaaaatctgattttgagcttctttttattgtaataagcaga  19023300                            --------->LBD16                           <---------ANAC58                           <---------ANAC55(1)                           <---------ANAC46                           <---------ANAC58                           --------->ANAC55(2)                           <---------ANAC55(2)                          <-----------------------TaNAC69(2)              --------->At5g28300                        <---------ARR14(2)           <---------MYB46(3) --------->ANAC58                        --------->ARR14(2)         <---------ANAC58     --------->ANAC58                     <------ZmHOX2a(1)             <---------ANAC58     --------->ANAC46                  <-----------RAV1(2)              <-------GAMYB       <---------LBD16       --------->ANAC58--------->GLK1(1)    <---------ANAC58      --------->GLK1(1)       --------->ANAC58<---------GLK1(1)    <---------ANAC46   --------->ANAC58 -At4g35610      <------NtERF2              <---------ANAC58   --------->ANAC58      --------->MYB52(1) >At4g35610      --------->At4g35610  <-------TEIL<---------MYB46(3)   --------->LBD16    <---------GLK1(2)   cgagattacaagcacaggctgcaggagttccgtatcaaggctcgtgtcgtcttggttgtttcgacacgaattccacggtatatttgctaactgattctta  19023400  Previous    Next  AGI:  At2g46320.1    Description:  mitochondrial substrate carrier family protein. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT4G27940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39719.1); contains InterPro domain Adenine nucleotide translocator 1; (InterPro:IPR002113); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 19022886    to: 19025303    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version