Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <---------MYB52(1)                               --------->LBD16                               <-----------HVH21                              <---------ANAC55(2)                              <---------ANAC58                              <---------ANAC55(1)       --------->At4g35610    <---------ANAC58       --------->HSFC1(2)     --------->ANAC55(2)       <---------At4g35610<---------HSFB2a(1)       <---------HSFB2a(1)--------->HSFC1(2)       <---------HSFC1(2) --------->HSFB2a(1)       --------->HSFB2a(1)<---------HSFC1(2)    <------ZmHOX2a(1)    --------->HSFB2a(1)   <------MYB46(1)       <---------HSFB2a(1)                           <-----------GT1   <------MYB83     <---------HSFB2a(2)                           <---------ANAC58 <--------P         --------->HSFB2a(2)                           <---------ANAC46 --------MYB46(3)   <---------LBD16     ------>ZmHOX2a(1)         <---------ANAC58--------->AHL20(2) ------>ALFIN1 <-------MYC3--------->ARR14(2)            <---------ARR14(2)   <---------AHL20(2) --->ZAT6      ------->MYC3<---------ARR14(2)            --------->ARR14(2)   --------->AHL20(2)   -- ->MYB52(1)   --------->ANAC46<---------ANAC46           <---------GLK1(2)--------------->AGL15   <--   gtggtaggaagcttacacgtttctcggaagttccgtgaggtccttcttgtttggattcagaacctcttccttgtaactatataaataaaaacaaaactaa  18992800                                                                                   --------->ANAC58              <------ZmHOX2a(1)                                                    --------->ANAC58<-          ---------->DOF2                                               <---------ICU4        <------    <----------DOF2                                    ---------->DOF2  --------->YAB1  <---------At4g35610 ------->GLK1(2)                        --------->DOF5.7(2) <----------DOF2        --------->ANAC46<- -------GLK1(2) <------ZmHOX2a(2)   ------->TEIL    <----------DOF2    <---------ATHB12 --------->At4g35610   gaatctctttaaaaaaggatcaaatttgaaggaagacgaatcgtttactcactgcttcaaagctttgtggctaatcatcttcttcacgacagcaaacttt  18992900                                                                                 --------->ARR14(2)            <----------DOF2                                                 <---------At4g35610     <      <----------DOF2            ----------->GT1                            --------->At4g35610   <-- --------TOE2(3)             ---------->DOF2                                --------->ZAT2      ----- ----DOF2  <---------DAG2 --------->ANAC58                                  <---------ZAT2      <---- --------TOE1(3)          --------->ANAC58        <<<<<<<ZML2   ---------->DOF2  <---------ARR14(2) -   tgaggtttctttgcctttcccatcttcgaagcaaagagtaacaaaaaccctagaacgacgcagagagaaagactgggaagctgaatatgcgaggtctgaa  18993000      --------->At4g35610                                                                 <---------AHL20(2)      <---------At4g35610                                                                --------->AHL20(2)   --------->ATERF1(1)                                                                   <---------AHL20(2)   <------NtERF2                                                                     --------->AHL20(1)  <---------ATERF1(1)                                                             --------->YAB1 <---------DEAR3(1)             *TSS                                             <---------ATHB51 ---------LBD16                <---------GLK1(1)           <-----------GT1   ------------>CBF -------DEAR3(1)             <---------ANAC58        ------------>CBF --------->YAB1 --------->AHL20(2) ---->ARR14(2)               <---------ANAC58      ------->GAMYB     <---------YAB1  <---------AHL20(2) -----ARR14(2)              --------->MYB59     --------->MYB52(1)   --------->ICU4  <---------AHL20(1) -------->At4g35610  <-----------------AGL1   <---------MYB52(2) <---------MYB59 <---------ATHB12 <--   tcggcggaggctgagaagtggttttcgaattgggtatcagagacggagactaacgctcaatatacagcctaattataagcccaataataaaataaatggg  18993100                                                   <---------TOE1(3)                                                   <---------TOE2(3)                                                 ---------->DOF2                                         ------->MYC2                                         <-------MYC2                                         <-------MYC3                                         ------->MYC3                                        <---------TGA1a                                        <---------ANAC55(1)                                        <---------O2                           <---------ARR14(2)                                        --------->O2                           --------->ARR14(2)                                        --------->TGA1a                        <---------GLK1(2)                                        --------->ANAC55(2)                  --------->LBD16                                        <---------ANAC58               --------->HSFC1(2)               ===================================bZIP_DOF             <---------HSFB2a(1)    --------->AHL20(2)                  <---------ANAC58               <---------HSFC1(2)    <---------AHL20(2)                  <---------ANAC55(2)        ----------->GT1    ---------->DOF2   <---------AHL20(2)                   <---------ANAC46    --------->MYB52(1) <---------ARR11(3) -------MYB59  ---------->DOF2          ====================bZIP_DOF   --------->HSFB2a(1)          <   cctaatttatatggcccataagcgaagcgagtttcttaaatcacgtgttagtaaaggttaagaaacgaagagaaaattccagatttttcaaagtgatgcg  18993200                          <----------DOF2                       <---------ARR11(3)                                  <----------DOF2                       --------->AHL20(1)                               --------->ARR11(3)               --------->At4g35610                                --------->ANAC58            --------->At4g35610       ------->TEIL                --------->ANAC58      *TSS  <---------At4g35610    ----------->HVH21           <---------ATHB12     ------>ZmHOX2a(2) --------->ARR11(3)                    --------->WOX13(1)   <---------ARR11(3)  <---------AHL20(1)                --------->HSFB2a(2)         --------->ZAT18   --------->ARR11(3) --------->CCA1(1)                  <---------HSFB2a(2)         <---------ZAT18 ---------KAN4(2)     --------->RVE1(1)              <----------DOF2    <---------ARR11(3)          -   agaatgatctggagagcagaagaaatatcttttccctctgaacgttgttgttcgtctttctataaatcaagaaatgtctttggattgttcactacccata  18993300                                                         <---------WOX13(1)                      ----             --------->At4g35610                       --------->ATHB12                --------->ARR14(2)             ----------->RAV1(2)                      <---------YAB1                   <---------ARR14(2)             <---------At4g35610                <----------DOF2                       ===============           --------->YAB1                       <---------DAG2                        <------ZmHOX2a(1)          <---------ATHB12                --------->ARR14(2)                          ===============        --------->WOX13(1)                <---------ARR14(2)                        <---------TOE2(2)   --------->At4g35610   ----------->GT1 --------->GLK1(1)                          <---------TOE1(2) --------->DAG2        ---------->DOF2   <---------GLK1(1)                  <---------ARR11(3)   <--- --------->DOF2     --------->YAB1   >>>>>>>>>TBF1    <---------AHL20(2)    --------->ARR11(3) <-----   gaaaaagctgcaatcatctgaatcagaaagtaattcgaagaagaaatctgctttttttaattggtggagagagtgagagagcttcgcaggaactgagtca  18993400            ------>ZmHOX2a(2)           <------ZmHOX2a(2)          --------->ARR14(2)          <---------ARR14(2)       <---------ANAC55(2)       --------->ANAC46             <---------MYB52(1)       --------->ANAC55(2)         <-----------HVH21      <---------LBD16         <---------ZAT2     <-----------GT1   <---------ANAC58                                  --------->ARR14(2)     --------->MYB52(1)<---------ANAC58                                  --------->GLK1(2) ----->At4g35610       <---------ANAC46                                  <---------ARR14(2) ==================HOX2a_HOX2a--------->At4g35610                        --------->ARR11(3) =================HOX2a_HOX2a <---------At4g35610                       <---------GLK1(2) ------At4g35610       <---------ANAC55(1)                        <----------DOF2  --------->ATHB12 ----WRKY38(1)      <---------MYB52(1)    <-----------GT1<---------TOE2(3)        <-------TEIL     <-   tcggaatttacggatcgtttctgtttcgtgtaagctccgtcattttcccttcttagtttaatgaatagctttgagaatcttgagttcattgctcttagtt  18993500                                                    <---------AHL20(2)                                         <---------TOE2(3)                            <---------ARR11(3)      --------->ICU4                            <---------ARR14(2)      <---------ATHB51 ------>MYB46(1)                            --------->ARR14(2) --------->ANAC58      ------>MYB83             --------->ATHB12       <---------MYB46(3)    <---------YAB1           <---------WOX13(1)      <---------YAB1   --------->AHL20(2)   <-----------GT1    --------- --------->YAB1             --------->ARR11(3) ----------->GT1     <---------MYB59         <---------ATHB12 --------TOE2(3)            <---------GLK1(2)  --------->ANAC58  ------->TEIL             <---------TOE2(3)   taatgaagatgcgattgatttagtttggcagattttggtgattgtggtaacgaaataattctgaatgaaccaaattcacattgtatttttctaatgatat  18993600                                                                            <-------TEIL                                                                            =========================                                                                            ------>ZmHOX2a(2)                                                                           <------ZmHOX2a(2)                          <---------------AGL15       --------->YAB1      ------->TEIL                          --------------->AGL15     <---------TOE2(3)     --------->ARR14(2)                          --------->HSFB2a(2)  --------->ATHB12           <---------ARR14(2)                <---------ZAT14             ------>ZmHOX2a(2)        <---------AtLEC2             --------->At4g35610          <---------ARR11(3)        <---------REM1(2)            <-----------RAV1(1)           --------->ARR11(3)      --------->ZAT14         --------->ARR14(2)           <---------ANAC55(2)         <---------ZAT18 <---------ARR14(2)      <-----------------AG <---------YAB1 <---------ANAC58   --------->YAB1 --------->ARR14(2)    <-----------GT1--------->ANAC55(2)    <---------ANAC58--------->WOX13(1) >YAB1   <---------ARR14(2)      ----------->GT1   ---------->DOF2<---------ZAT14        <-----------HVH21   atggatttgggtatttgctgcagttttactggaattggttaagtgatcttgattaaagatgatgcctgtgtacatggatccatcacaaccatgtcaaatg  18993700  Previous    Next  AGI:  At2g46230.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G26530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39702.1); contains InterPro domain Nucleotide binding protein, PINc (InterPro:IPR006596); contains InterPro domain Protein of unknown function DUF652 (InterPro:IPR006984) Range:  from: 18991272    to: 18993032    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g46240.1    Description:  BAG6 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 6); calmodulin binding / protein binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G28770.1); similar to hypothetical protein OsI_006504 [Oryza sativa (indica cultivar-group)] (GB:EAY85271.1); similar to hypothetical protein OsJ_005962 [Oryza sativa (japonica cultivar-group)] (GB:EAZ22479.1); contains InterPro domain IQ calmodulin-binding region (InterPro:IPR000048); contains InterPro domain Apoptosis regulator Bcl-2 protein, BAG; (InterPro:IPR003103) Range:  from: 18993206    to: 18997020    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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