Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          --------->LBD16                   --------->At4g35610                       <---------ANAC58                   <---------ZAT2                       <---------ANAC58                   --------->ZAT2                 --------->ZAT6                           <---------At4g35610               <-----------GT1                   <---------YAB1          <-----------GT1            <---------REM1(1)               <---------AHL20(2)      <---------YAB1            -------          <---------ANAC46                  --------->AHL20(2)      <---------AHL20(2)       <-------   ttgaactgttttaggtgtaactctaccgtgataaaaaactacatatttattttgattttctgctgagtttataattttctaatcgctaagcctaagaatc  18986100                                                           --------->LBD16                                                          <---------ANAC58                                                          <---------ANAC58                                                         <---------LBD16                               <---------ANAC58        <---------SPL7                               <---------ANAC58       <---------ANAC58                           <---------ANAC58           <---------ANAC58                  --------->ANAC46                           <---------ANAC46           ------>ZmHOX2a(2)       --------------->AtSPL8   <---------YAB1          <---------ANAC58          <------ZmHOX2a(2)       ---------->DOF2========= -->GLK1(2)               <-------TEIL              --------->ARR14(2)   ----------->HVH21  --------- --GLK1(2)       <-----------HVH21                  <---------ARR14(2)<-------TEIL    <---------ALFIN1   tatttttgataaacaaatttgtcagacatgcgtgcttgttctacgtttaagacggatcgtgcgggtctaatatacatgacaaagtactccaccgaaaaac  18986200                                     ---------->DOF2                            <---------O2                            --------->TGA1a                            ====================bZIP_DOF                            <---------TGA1a                            --------->ANAC46             ------>MYB46(1)--------->ANAC58                      <---------YAB1             ------>MYB83   --------->ANAC58                <---------YAB1   ===================================bZIP_DOF           <-------TEIL     --------->MYB46(3)   <----------DOF2          --------->O2        <---------HSFB2a(2)     ----------->RAV1(1) =====================================bZIP_DOF  --------->HSFB2a(2)    <----------ID1      <--------- ->DOF2    <---------MYB59<---------DOF5.7(2)  <---------LBD16 <---------YAB1   ---------->DOF2   <--   ccgagcttttgaaccaaattgtttgagttcacgtcaatgtaaagttttatctggaagggttcatgcttattatacaacaaatgaaagaacattttgccaa  18986300                                                                                           <---------YAB1                                                                                         <---------ICU4                                                                                         --------->AHL20(2)                                                                                         <---------AHL20(2)                                                                                         --------->ATHB51                                                                                        <---------YAB1                                                                                        --------->ICU4                                                                                      --------->YAB1                                                                                      <--------HAHB4 ------->TEIL                                       <---------MYB52(1)               <---------YAB1 --GT1      <---------TOE2(3)                  <-----------GT1     --------->CCA1(2) <---------ATHB12 -------ATHB12<------ZmHOX2a(1)           <----------DOF2    --------->ANAC46      ------>ZmHOX2a(1)   atgaatttggagtttaggaagaaaacaaaaaactagttgggcctctttgaaaccgtttcatacacacagatataagtgaggcttcctataattatttttg  18986400                                                   --------->TOE2(3)                                                   --------------->AGL15                                                   --------->YAB1                                                   <---------------AGL15                                                   --------->TOE1(3)                                                  ----------------->AG                                                  <-----------------AGL2              <---------YAB1                      <-----------------AGL3                           --            --------->YAB1                        ----------------->AGL2                           --            <---------ICU4           --------->ANAC55(2)                                          ---            -------->HAHB4           <---------ANAC46                                           <----           --------->ICU4            <---------ANAC58                                        --------          <---------AHL20(2)         <---------ANAC55(2)                                    ---------         --------->YAB1              <---------ANAC58                --------->AHL20(2)   <---------ICU4        <---------YAB1              <-------TEIL  ==========================================MADS_MADS       --------->AHL20(1)       <---------TOE2(3) ----------------->AGL1    --------------->AGL15 <--       --------->AHL20(2)       <---------------AtSPL8               <---------AHL20(2)  --------->ICU4       <---------AHL20(2)     ---------->DOF2     ----------------->AGL3    <---------------AGL15 <--      --------->YAB1   <----------DOF2  ---------->DOF2        <-----------HVH21       --------->YAB1 --------->YAB1--------->ATHB12 <---------------AtSPL3      ------->TEIL  ------------>CBF--------->YAB1   taatcaaattataataatgaatgggctttacttaaaggtacgtgaagccctaaccataaatggaccgtcatataatttcaattttgggataatcatcaga  18986500                                                                                                    -                                                                                              ------>ZmHOX2a(1)                                                   <---------MYB52(1)                         ------- ------->TOE2(3)                               --------->GLK1(2)                      <---------ARR11(3) ------->TOE1(3)                              <---------GLK1(2)                       --------->ARR11(3) ------>HSFC1(2)                            *TSS --------->YAB1                ------>ZmHOX2a(1)    - -----GLK1(2)            <------------CBF  --------->LBD16--------->AtLEC2    --------->TOE1(3)     < ->YAB1         <---------ANAC46           <---------HSFB2a(2)    ----------->GT1  <------ZmHOX2a(1)- >At4g35610<------------CBF                --------->HSFB2a(2)------>NtERF2   --------->TOE2(3)   <-- -------HSFB2a(1)<-------GAMYB <---------At4g35610 --------->DOF5.7(2)     <-----------GT1  --------- -------HSFC1(2)<---------MYB46(3)        <---------TOE1(1)  --------->LBD16<---------YAB1<----------   accttcaacgagtcattgtcgttgaagaattgaagatgacaagtccgagaatcgttatccatgcggacttgaaaaattatccttaggagatttttcctga  18986600          --------->DEAR3(1)         <------NtERF2        <-----------HVH21       --------->O2       <---------O2                                    <---------ARR14(2)       --------->TGA1a                                 --------->ARR14(2)       <---------TGA1a                                <---------GLK1(1)    ------>ZmHOX2a(1)                                 --------->GLK1(1) -------->ARR14(2)                                --------->ANAC58 ---->HVH21                                       --------->ANAC58 ----->MYB83                                      --------->ANAC46 ---------ARR14(2)                              ------>ZmHOX2a(1)                        <---------ARR11(3) ----->MYB46(1)<----------DOF2             --------->KAN4(2)                             --------->ARR11(3) -------MYB59 <------NtERF2               <---------KAN4(1)                             <---------CCA1(2) -->RAV1(2)  ------>NtERF2                --------->KAN4(1)                      ------>ZmHOX2a(1) -GT1  ===================bZIP_DOF        <----------TaMYB80            <---------YAB1--------->AHL20(2)   cctatcctcgcgtcgcgccttcttgtcttctctctcaatccagcatattcctacgcaaatcccttatcgttttcatgtttgtcctggtttaaatcttcaa  18986700                                                        <---------ALFIN1                                                        --------->ANAC46 --------->HSFC1(2)                                                       --------->MYB46(3)<---------HSFC1(2)                                                    --------->CCA1(2)    --------->HSFB2a(1)                                                    --------->GLK1(1)   <---------ARR11(3)                                                <------NtERF2           --------->ARR11(3)                                               --------->LBD16    <------NtERF2                                              --------->DEAR3(1)<---------DEAR3(1)                                             <---------LBD16<-----------HVH21                                          --------->SPL7--------->MYB55(1)           <----------DOF2               <---------MYB52(1)--------->DEAR3(1)           <---------ARR14(2)       --------->LBD16                  <---------SPL7 <---------MYB55(2)<---------HSFB2a(1)     <---------LBD16                   --------->MYB52(2)------>MYB46(1)<-----------ARR10           <   -------->P                    <---------ANAC58  <---------ARR14(2)   --------->ARR14(2)     <-----   ------>MYB46(1)               <---------ANAC46  --------->ARR14(2)   --------->GLK1(2)      ------   ------>MYB83                  <---------ANAC58 <----------TaMYB80    <---------ARR14(2)    >>>>>>>  ------>ZmHOX2a(1) ------>ZmHOX2a(1)  <---------MYB46(3)------>MYB83  <---------GLK1(2)--------->ARR14(2)   tctcctacccggtcttttcatcctccgatggcattccttgttcgttcgccggagatacccaccgtctcggcgagaatcttctccgatgcgaattcgagtg  18986800                                                           ----------->RAV1(2)                                                           <---------AtLEC2                                                           <---------ANAC58                                               ------>NtERF2                                              <---------bZIP60(1)                                              --------->ANAC58                                              --------->ANAC46                                              --------->ANAC58                                              --------->bZIP60(1)                                           ----------->HVH21                                          <---------WOX13(1)    <---------ZAT6          <---------ZAT14                                         <-------GAMYB --------->CCA1(2)<---------ARR14(2) ---------YAB1                   <---------ARR14(2)   <---------ARR14(2)--------->GLK1(2) ----ZAT6             <------ZmHOX2a(1) <---------MYB46(3) <---------ANAC58 --------->LBD16 ----->GT1         <------ZmHOX2a(1)<---------ANAC46  --------->ARR14(2)--------->ARR14(2)        <-- >>TAC1--------->ANAC55(2)       --------->ARR14(2) ----------->ARR10<---------TOE2(3)<--------------   ttattagtcatgtgtttatgaggaggaaggctacggtttcggcgattgacgccagagatttgcctggtgttaagaatccgaaatcgagattgtactggca  18986900             ---------->DOF2                                                                 --------           ----------->HVH21                                                                 --------       <---------LBD16                                                        <---------ANAC46      -     <---------ARR14(2)                                 >>>>>>>>>TBF1         <---------ANAC55(2) <--    <---------At4g35610                              >>>>>>>>>TBF1            --------->ANAC55(2)<---    --------->ZAT2                                >>>>>>>>>TBF1       ----------->GT1        --------    --------->At4g35610                    <------ZmHOX2a(1)          <---------ZAT6      -----------    <---------ZAT2                      <------ZmHOX2a(1)         --------->At4g35610    <-----------HVH21 ---------ARR10                 --------->At4g35610------------------------>ANAC81 --------->ARR14(2) -AtSPL8 --------->LBD16    <---------GLK1(2)  >>>>>>>>>TBF1   --------->CCA1(2)   <---------ARR14(2)   attctcagctccggtgaaagaagactacaagattagcagagaggaggaagaagaagaagaagaagataagcagagttactacgtgaatatgggtcacgcc  18987000  Previous    Next  AGI:  At2g46210.1    Description:  delta-8 sphingolipid desaturase, putative. similar to delta-8 sphingolipid desaturase (SLD1) [Arabidopsis thaliana] (TAIR:AT3G61580.1); similar to unknown [Populus trichocarpa] (GB:ABK95618.1); similar to delta-8 sphingolipid desaturase [Brassica napus] (GB:CAA11857.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39694.1); contains InterPro domain Fatty acid desaturase, type 1; (InterPro:IPR005804); contains InterPro domain Fatty acid desaturase, type 1, N-terminal; (InterPro:IPR010257); contains InterPro domain Cytochrome b5; (InterPro:IPR001199); contains InterPro domain Fatty acid/sphingolipid desaturase; (InterPro:IPR012171 Range:  from: 18984417    to: 18986074    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g46220.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G79510.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G16320.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G79510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39696.1); contains domain NTF2-like (SSF54427) Range:  from: 18986544    to: 18987843    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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