Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->LBD16                               --------->RAP2.3(3)                               --------->DEAR3(1)                               --------->ATERF1(2)                               --------->RAP2.6(2)                               <---------ATERF1(2)                              <---------LBD16                              <------NtERF2                              --------->RAP2.3(1)                              --------->ATERF1(1)                             <---------RAP2.3(1)                             ------>NtERF2                             <---------ATERF1(1)                            <---------DEAR3(1)                            --------->ANAC46                          <---------ATERF1(1)                        ------>ZmHOX2a(2)                        --------->DEAR3(2)                       --------->CCA1(2)                       <------ZmHOX2a(2)                      <---------ARR11(3)                      --------->ARR14(2)                                         <------------CBF                      --------->AGP1---------->DOF2                             -------->HAHB4                      <---------ARR14(2)                                        --------->ATHB51                     --------->GLK1(1)                                          <--------ATHB1                     <---------GLK1(1)--------->ANAC58                          <---------ICU4                    ----------->ARR10 --------->ANAC58                          --------->ATHB12             <----------DOF2--------->DEAR3(1)                                 <---------AHL20(2)        <------ZmHOX2a(1)----------->HVH21                                     --------->ICU4 -------        ======================HOX2a_HOX2a                                      <---------ATHB51   --------->ANAC46------>NtERF2------>NtERF2      --------->ZAT18             --------->AHL20(2) <--  <---------LBD16 --------->LBD16<------NtERF2     <---------ZAT18    <---------ANAC58    --------->AHL20(2) ->GT1  =======================HOX2a_HOX2a  *TSS <---------ZAT18      <---------ANAC58  <----------DOF2   tttctacggaggagactttgccgagatccgacgccggcaaaagcaaaacagagcgcgcgaggttgagaagatgcttatgaaataattgggctttaaattt  18984000                                                   ------>NtERF2                                                   --------->LBD16                                                  --------->ANAC58                                                  --------->ANAC58                <------ZmHOX2a(1)                 --------->ANAC46        ----------------->AGL1                   --------->MYB46(3)       ---------->ID1                          --------->ARR14(2)                               <----       <-----------------AG                    <---------ARR14(2)      --------->YAB1           <----   <----------DOF2                            <---------CCA1(2)--------->ATHB12                ------ -->AHL20(2)   ----------->GT1    --------->AHL20(2)          <-------TEIL                --------->ICU4 ---------GT1  <----------ID1     <---------AHL20(2)     ---------->DOF2          <------ZmHOX2a(1)   atacactttggcccattaggaaaaatataagcccatttaaaaggttttgtatccgccactaaagttcattgaatcacaaaaataggatgctaatttttaa  18984100          --------->ZAT6                                           <---------TOE2(3)         >>>>>>>>>>AtWER<----------DOF2                            <---------TOE1(3)        --------->MYB52(1)                                        ---------->DOF2      <---------MYB52(2)<---------DAG2                         <----------DOF2    --------->ARR14(2) -----TOE1(3)   <---------DAG2              <---------AHL20(2) --------->TOE2(3)  <---------ARR14(2) -----TOE2(3)   <----------DOF2------>ZmHOX2a(1)               --------->TOE1(3) <------ZmHOX2a(1) ---->DOF2--------------->AtSPL3  <----------DOF2   <---------MYB52(1)         <---------TOE2(3)   agtttagaactaacagtacttttccactttttcctgcttttgtgattttattctgttattgacaactttaaagttgctcttgaggatactctagtttttc  18984200                               --------->MYB46(3)                              --------->ANAC46                              --------->ANAC58               --------->ARR11(3)     <---------ICU4           ---------->DOF2    --------->ANAC58      <---------------AGL15  ------>MYB83      --------------->AGL15  ------>MYB46(1)     --------->MYB46(3)     <---------ALFIN1                                            <---------ZAT14   --------->WOX13(1)      <---------MYB55(2)                                           --------->ZAT14  <---------WRKY38(1)      --------->MYB46(3)                                     <-----------HVH21  <---------WRKY12    <---------WOX13(1) --------->YAB1  <-----------GT1   <-----------HVH21      ---   tgagtcaaccactaaaagaaattgatagacccacccaaactaatgacaaattgacatattaacatgtaagacaaccttgtcaaatgtcactggagttttc  18984300                              ----------->GT1                             --------->DAG2                           ---------->DOF2             <---------------AGL15                         <---------ANAC58             --------------->AGL15                   <---------YAB1  --------->AHL20(2)            ----------------->AGL3  --------->YAB1   <---------AHL20(2)                --------->AHL20(2)            <-----------------AGL2  --------->AHL20(2)     <---------ANAC58         --------->YAB1<--   <---------ATHB12   ----------->GT1   >>>>>>>>>>>>>>>>>LFY  <-----------GT1   <---------HSFB2a(2) --->ZmHOX2a(1)       <---------ZAT6<---------AHL20(2) <------------CBF         --------->HSFB2a(2)   ctctaatcaacaattccatttatagagttaaaaggtaattaaaaccagtggattttttattgcttaaccatttaaaacggttctaaaaataaaacacaag  18984400                    ----------------->AG       <-------TEIL ----------------->AGL1      --------->ARR14(1)                                                   ----------->ARR10      --------->CCA1(2)                                       <------ZmHOX2a(1)             ---------     <---------ARR14(2)                                     <---------TOE2(3)        --------->YAB1<-     --------->ARR11(1)                                 --------->YAB1    <------NtERF2  --------->GLK1(2)     <---------GLK1(2)                            --------->ANAC58      <---------ANAC58 --------->ARR14(2)     --------->ARR14(2)       --------->ZAT14     --------->ANAC46      <---------ANAC58 <---------ARR14(2) ---------HVH21  *TSS      ----------->GT1        --------->ANAC58      <---------ANAC46<---------GLK1(2)   tgtcaaagattcgaacatcgattccaaaacagtaaacaaacaaaaaacacacacacaaatataaggaagagaaggcgtagaatcgattcagaatctgtga  18984500                                                            <---------GLK1(1)    --------->GLK1(2)                                    <---------ZAT18    --------->ARR14(2)                           <---------ANAC58    <---------ARR14(2)                           <---------ANAC58    ------->TEIL                         --------------->AGL15 <---------ANAC55(2)                     <---------------AGL15 --------->ANAC55(2)                    <-----------------AGL1 <---------YAB1                         <-----------------AGL3  <---------ANAC58 -->GT1                                 <-----------------AGL2  <---------ANAC58   <------ZmHOX2a(1) ----------GT1                      <---------DAG2    <---------ANAC46 <----------DOF2         <-----   attacgaatccatagagagaaaggttttgcatttgcaacctttctcaaattgggttctgtgcatttccttgcactttggataataggaactaaatctctt  18984600                                            --------->ANAC58                                            --------->ANAC46                                     --------->ANAC55(2)                                     <---------ANAC55(2)                                     --------->ANAC58                                     ----------->GT1                                     --------->ANAC58                   <------ZmHOX2a(2)<-------TEIL   <---------ARR14(2)                  <-----------ARR10--------->ARR14(1)               <---------ANAC46    --------->CCA1(2)               <---------ANAC58   --------->ARR14(2)                ------->GAMYB  <---------TOE2(3)               <---------ANAC58   --------->ARR11(1)               <---------MYB52(2)              <---------LBD16     <---------ARR14(2)  ----------->GT1   <---------LBD16--------->GLK1(1)        <---------YAB1           --------->CCA1(2) --------->ARR14(2)  ----------->RAV1(2)       <---     <-------TEIL<------NtERF2  ----------->ARR10 <------ZmHOX2a(1)--------->MYB46(3)  <---------GLK1(1) -----DOF2    <---------------------WRI1    --------->ANAC58  --------->ANAC46 <----------DOF2   <---   tctctggttcatcaatggcggatcaaacgaagaagagatacgttacaagcgaggatttgaaaaaacacaacaaacctggagatttatggatttcgattca  18984700                                                                                    --------->DEAR3(1)                                                                                    --------->At1g77200                                                                                   --------->DEAR3(2)                                                                                --------->TGA2(2)                                                                                ----------->HVH21                                                                               <-----------TGA1                                                                               <-----------HVH21                                                                              =======================                                                                              <---------ANAC55(2)                                                                              --------->ANAC58                                                                              <---------bZIP60(1)                                                                              --------->TGA1a                                                                              <---------TGA1a                                                                              --------->ANAC58                                                                              --------->ANAC46                                                                              <---------O2                                                                              --------->O2                                                                              --------->bZIP60(1)                                                                              --------->TGA2(1)                                                                              --------->bZIP60(2)                        ----------->GT1                                <------NtERF2----------->HVH21                  <---------YAB1                                      --------->LBD16                 ----------------->AG                                 <---------ATERF1(1)               <---------ARR14(2)                                     --------->ORA47(1)             <---------HSFC1(2)                  --------->ZAT2       ------>NtERF2--------->MYB46(3)             --------->HSFC1(2)                  <---------ZAT2      <---------ATERF1(2)         --------->ANAC46                   <------NtERF2            --------->DEAR3(1)  --------->DAG2 ----------------->AGL1   <---------DEAR3(1)         --------->ATERF1(2)    <-------TEIL ---------->DOF2<-----------------AGL1  --------->LBD16             --------->ATERF1(1) ------>NtERF2 ------TOE2(3) --------->ARR14(2)      --------->LBD16  --------->GLK1(2)     <---------TGA2(1)   <-- ------TOE1(3)--------->DOF5.7(2)     <---------LBD16  <---------GLK1(2)     <-----------STF1     <--   aggtaaagtttacgacgtttccgattgggttaaatctcatcccggaggcgaagcagcgattctcaatctcgccggccaagacgtcaccgacgcgttcatc  18984800                                                                             --------->TGA1a                                                                             <---------TGA1a                                                                       <-----------HVH21                                                                     ------->MYC4                                                                     ------->PIF5    ------->MYC3                                                                     <-------MYC4    <-------MYC3                                                                     <-------PIF5   --------->ANAC58                                                                     ------->MYC2   <---------TGA1a           --------->ARR14(2)                                        <-------MYC2   <---------ANAC55(2)           <---------ARR14(2)                                        <-------MYC3   --------->ANAC55(2)         --------->LBD16                                       --------->AtMYB61    --------->ANAC46        --------->ANAC46                              ------->MYC3  <---------ANAC55(2)        <---------ANAC55(2)                           <-------MYC3  <---------O2    --------->ANAC58        --------->ANAC55(2)                          <---------O2   --------->O2    --------->TGA1a        --------->HSFB2a(2)                          --------->ANAC55(2)     <---------O2        <---------HSFB2a(2)                          --------->O2   --------->ANAC55(2)        --------->LBD16         ==============================================bZIP_DOF       <---------LBD16          ---------->DOF2      <---------ANAC55(2)     --------->O2      <-----     ------>MYB83               ===============================bZIP_DOF----------------------->TaNAC69(2)     ------>MYB46(1)    <---------ALFIN1             <---------TGA1a--------->TGA1a --------->O2     -------->P        <------NtERF2                 <---------ANAC46------->MYC3----------->HVH21 =============MYC_MYB ------>NtERF2                  --------->TGA1a<---------TGA1a --------->bZIP60(1) -------ANAC58    --------->ANAC58                   =========================bZIP_bZIP    --------->MYB52(1) -------ANAC58    --------->ANAC58               <-----------HVH21<---------ALFIN1  <---------O2   gcttaccatcccggaaccgcatggcaccacttagaaaagcttcacaatggctatcacgtgagagaccaccacgtgtcagacgtctcacgtgactaccgtc  18984900  Previous    Next  AGI:  At2g46200.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO39689.1) Range:  from: 18981735    to: 18983944    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g46210.1    Description:  delta-8 sphingolipid desaturase, putative. similar to delta-8 sphingolipid desaturase (SLD1) [Arabidopsis thaliana] (TAIR:AT3G61580.1); similar to unknown [Populus trichocarpa] (GB:ABK95618.1); similar to delta-8 sphingolipid desaturase [Brassica napus] (GB:CAA11857.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39694.1); contains InterPro domain Fatty acid desaturase, type 1; (InterPro:IPR005804); contains InterPro domain Fatty acid desaturase, type 1, N-terminal; (InterPro:IPR010257); contains InterPro domain Cytochrome b5; (InterPro:IPR001199); contains InterPro domain Fatty acid/sphingolipid desaturase; (InterPro:IPR012171 Range:  from: 18984417    to: 18986074    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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