Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->ALFIN1                                                          --------->ZAT2                                                          <---------ZAT2                         <---               --------->AHL20(2)                       <-----------RAV1(2)                <---------           ------->TEIL                    <---------------AGL15                           <---------DAG2       --------------->AtSPL8             ----------------->AGL3                    <---------YAB1       <---------------AtSPL8             <-----------------AGL3                    <-----------GT1 -------->AtMYB61              ------->TEIL--------------->AGL15     --------->GLK1(2)    <---------- >TOE2(3)  <-------TEIL       <-----------GT1           <---------HSFB2a(2) --------->ANAC46   ------   aaccaaaacaatgtacataaattgatgaaattgaaccctatttatctaaaaatagtttccaggtgggaacgattctatacgacgttatacttcctttttc  18968100                                --------->ANAC58                                --------->ANAC58                          <---------ANAC46                          <---------bZIP60(2)                         <---------TOE2(3)                       ----------->TGA1                       ----------->HVH21                     --------->At4g35610                                                            -                 --------->ARR14(2)                                                                 -         <---------HSFB2a(2)    --------->ANAC46                                                    -         --------->HSFC1(1)   <---------DOF5.7(2)                                                ----     <----------DOF2 ------>ZmHOX2a(1)                               <---------YAB1              <---  <-----------GT1<---------ARR14(2)                          <------NtERF2        --------->RAP2.6(3) <-----------GT1 --------->GLK1(2)  ---------->DOF2         ----------->GT1      <---------ARR14(2) < -------DOF2---------->DOF2  --------->WRKY38(1)         --------->At4g35610     --------->ARR14(2) - -DOF2   --------->HSFB2a(2) --------->WRKY12            --------->ZAT2       <------NtERF2  ------>NtERF2 --------------ANAC81----------->RAV1(2)                 <---------At4g35610<---------ANAC46<-------- ---->ID1<---------HSFC1(1) --------->DOF5.7(2)          <---------ZAT2 <---------WOX13(1) --------->MYB46(3)   tttttatctttctcgaaagaatcctctgacgttgacgcaaaagtcaaatttgtgtaatgagctggcaaattctaattggcgcaaatcggcatccccaccg  18968200            <---------DAG2    --------->HSFC1(2)                                                             <---------WOX13(1)    --------->ZAT2                                                               -------->ATHB1    <---------HSFC1(2)                                                           <--------ATHB1    <---------ZAT2                                                               --------->ATHB12    --------->HSFB2a(1)                                                          --------->YAB1    --------->At4g35610                                                          <------------ATHB5    <---------At4g35610                                                          <---------ICU4   ------->TEIL                                                                  --------->ATHB51 -------->ANAC58                                                                <---------ATHB12 -------->ANAC58                                                                <---------YAB1 -------->ANAC55(2)                                    <-----------GT1          <---------ATHB51 ----->ARR14(2)                   <---------MYB52(1)<---------AHL20(2)          --------->ICU4      - ------ARR14(2)                  <-------GAMYB     <---------AHL20(2)       --------->ZAT14     <---- ---------ANAC55(2)             ----------->GT1    <---------AHL20(1)       <---------ZAT14 <-------- -------->ANAC46    <---------ALFIN1               --------->AHL20(2)     --------->ANAC46  --------- -ALFIN1    <----------DOF2 ----------->HVH21      --------->AHL20(1)<-----------GT1      <----------   atacgcagcttctacttttcttccacctatatgaccgttaaattcagactcaatttaataccattcccatttttccactgcaataattgaccccagttgt  18968300                                              <---------AHL20(2)                                              --------->AHL20(2)          <---------WOX13(1)                                             --------->AHL20(1)          <---------ANAC58   <---------MYB46(3)<---------AHL20(2)      <---------AHL20(1)          <---------ANAC58 -------->MYB52(2)  --------->AHL20(2)       <---------AHL20(2)         --------->ATHB12 -----ZAT6        --------->TOE2(3)<----------DOF2              ---------->DOF2 ------->MYC3 -ZAT2         --------->AHL20(2)  <---------DAG2              <---------AHL20(2)              <----- >ZAT2 --------->MYB59          <-----------GT1           ----------------->AGL3<-------MYC3  ------- -RAV1(2)<------ZmHOX2a(1)   <----------DOF2 --------->AHL20(2)--------->AHL20(2)             -------   gttagtggttaggacaattacattaatttttcttttactttttaaaatttattttgggttttcatttaaagaattgattgcacatgaaacacaggcagga  18968400                                       <---------AHL20(2)                                       --------->AHL20(2)                                     ----------->TBP            --------->WOX13(1)                               <------MYB83                    --------->AHL20(2)   <---------AHL20(2)          <------MYB46(1)                 <---------AHL20(2)                   -  --------->AHL20(2)      <---------TOE2(3)                   --------->ICU4*TSS                    < -ZmHOX2a(1)         --------->ZAT6<-----------TBP         --------->AHL20(2) ----------->GT1       < -->ANAC58    <----------DOF2  ----------->GT1           ----------->GT1---------->DOF2            <- -->ANAC58 <---------ALFIN1   --------->MYB59 <---------ANAC55(2)    --------->At4g35610--------->MYB46(3)   catataaaattcaacactttccatcactaagtttggtttatataaatcacataaaccagaagtaattaatcagataaagaccgaaaaaaaaccaccatgg  18968500                              ----------->HVH21                              --------->DEAR3(1)                              <---------ETT(2)                             --------->ATERF1(1)                            <---------ATERF1(1)                            ------>NtERF2                            --------->LBD16                       <---------ZAT2                       --------->ZAT2                       --------->At4g35610              <---------RAP2.6(2)             --------->SPL7<---------DEAR3(1)                    ----------->RAV1(1)             ------->TEIL <---------LBD16                  ------>NtERF2         <---------------AtSPL3------>NtERF2           ------->TEIL        <------------------SPL14                       <---------ARR14(2) --------->GLK1(2)     <---------At4g35610  <-----------HVH21--------->DEAR3(1) -------->ARR14(2)  <---------MYB52(1)      <---------MYB52(1)------>NtERF2         --------->ZAT14 ---------GLK1(2)  <---------At4g35610     --------->LBD16 <---------ATERF1(1)  --------->ANAC46 ---------ARR14(2) --------->At4g35610   <---------LBD16  --------->ANAC46      <---------ALFIN1 --------At4g35610 <------NtERF2  --------->AtMYB61    --------->ARR14(2)     --------->ANAC46   cagattctgaacatgtacggccgctagctccggcgaccatacttccggtgagcgatgaatccgcctccaacatcaagaacacacaccgtagtagaaacag  18968600                           <---------ARR11(3)                      <---------At5g28300                          --------->REM1(1)              <----------DOF2                         <---                        ----------->RAV1(1)          --------->WRKY38(1)  <---------ZAT14    --------                <-----------TGA1                ------>ZmHOX2a(2)  <---------LBD16          <--------                <-----------HVH21              <------ZmHOX2a(2)  <-----------GT1           <------ZmHOX2a(2)               --------->ANAC46          --------->MYB46(3)      <---------REM1(2)---------->DOF2----   aatcaaatgctcaatctgcgtcactgcaacatctctaattctaaccacgatcgtgttgactttagttttcacggtgttcagagtcaaagacccgatcata  18968700                                                                                                <----                                                                                            ------->TEIL                                                                                            <--------                                                                                            ---------                                                                                         <---------ANAC58                                                                                         --------->ANAC55(2)                                                                                         <---------ANAC58                    --------->MYB46(3)                                                   <---------ANAC55(2)                   --------->At4g35610                                                   <---------ANAC46                   <---------At4g35610                                                  <---------TOE2(3)                  --------->MYB52(1)     ------>NtERF2                                 <---------DOF5.7(2)                  <---------DOF5.7(2) --------->LBD16                                 --------->WRKY12                 <---------WRKY38(1) --------->O2                                     ----------->HVH21    ------->TEIL <---------WRKY12    <---------ANAC46                                --------->DOF5.7(2)   --------->MYB52(1)------->GAMYB   <---------O2                                   <-------GAMYB---- ------AHL20(2)  <---------WRKY45 ----------->HVH21                     --------->ARR11(3)  --------- ->YAB1         --------->WRKY18(1) <---------LBD16         <---------MYB52(1)     <---------MYB46(3) -ATHB12<---------ANAC46      <-------TEIL     <---------ATHB12 <----------ID1     ------>ZmHOX2a(2) ----->AHL20(2)<-----------HVH21 <-----------HVH21        <-----------RAV1(1)     <---------YAB1<----   aaaatgaacggcgtaatggtcaacggcctagattcagtcacggggactaatcaagtccaactgttggggacaaacatctcgatgatcgttgacgtatcgg  18968800                                                                       <------MYB46(1)                                                                       <---------ANAC46                                                                      <---------DEAR3(1)                                                                      <---------MYB46(3)                                                                      --------->MYB55(2)                  <---------ANAC46                                    --------->MYB111(2)                 <------NtERF2                                       <---------ANAC46         --------->ARR14(2)                                        --------->MYB55(2)   --------->GLK1(2)                          --------->GLK1(1)    <---------MYB46(3)   --------->ARR14(2)  --------------->AtSPL8<---------ARR14(2)    <------MYB83   <---------ARR14(2)  --------------->AtSPL3--------->ARR14(2)    --------->MYB52(2)      --------->LBD16 ----ZAP1<---------ARR14(2)               <---------ANAC46         <------MYB46(1)         <---------LBD16 -ARR14(2)     <---------ANAC46        --------->ANAC46           <---------AtMYB61       <---------LBD16 >MYB52(1)     <---------DEAR3(1)      ----------->HVH21          <---------DEAR3(1)      <---------ANAC46 ----->WRKY18(1)------>NtERF2     --------->ANAC46             <---------HSFB2a(1)       <---------LBD16 >ARR14(2)  --------->ANAC46    ----------->RAV1(1)            --------->HSFB2a(1)      --------->MYB52(1) -------HVH21  --------->DEAR3(1) <---------ALFIN1      ---------->DOF2<------MYB83     -------->P   tcaagaatccgaatacggcgtcgtttaagtactccaacaccacgacggatatatactacaaaggaacgttggtgggtgaagcgcatgggctaccggggaa  18968900                                  <-------GAMYB                     <---------ANAC46                                 <---------MYB46(3)                ------>ZmHOX2a(2)                                <---------ANAC46                   <---------LBD16              <----                              --------->MYB52(1)        <---------RVE1(1)                    <-------                              ------------>AtMYB77     --------->ARR14(2)       <---------HSFB2a(2)                          ------->TEIL                 <---------ARR14(2)       --------->HSFB2a(2) <                     <------ZmHOX2a(1)              ------>ZmHOX2a(2)--------->LBD16        <------MYB83                  <---------HSFB2a(2)            --------->ATHB12 <------ZmHOX2a(2)         <------MYB46(1)                  --------->HSFB2a(2)       <---------YAB1<---------YAB1--------->ALFIN1   --------->MYB59         <---------At4g35610 ----------->HVH21<---------ANAC58   --------->ARR14(2)        --------->MYB111(1)         --------->At4g35610 ----------->TGA1 <---------ANAC58   <---------ARR14(2)   --------->ICU4<   ggcgagaccgcatcggacttcgaggatgaacgtgacggttgatattatgcttgatcggatattatcggatccgggtttgggtcgagaaataagtaggtcg  18969000  Previous    Next  AGI:  At2g46150.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G54200.1); similar to plant cell wall protein SlTFR88 [Lycopersicon esculentum] (GB:ABF39005.1); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) Range:  from: 18968476    to: 18969449    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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