Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <---------TOE1(3)                                                                       ---------->DOF2                                                                    --------->TOE2(3)                                                                    <----------DOF2                                    <---------------AtSPL8       <---------AHL20(1)                                    --------------->AtSPL8       <---------ARR11(3)              <---                         --------->ICU4                          --------->AHL20(1)        --------->TOE2(3)                        <---------TOE2(3)                        --------->ARR11(3)       -----------                      <---------AHL20(2)                 <---------MYB46(3)    <---------TOE2(3) ----                     --------->AHL20(2)     --------->ANAC46    --------->CCA1(1)    --------->YAB1            <-----------GT1         <---------------AtSPL3      --------->RVE1(1)   <---------YAB1 ---GT1 --------->AHL20(2)      ---------->DOF2          ----------->GT1<---------TOE2(3)<---------TOE2(3)   cttcttgggattatttaccaaaaattaatgtttagaaagtagtactactcaacatgtagttgttaaatatctttaaagtttaagttttgataatgttaaa  18965800                                             --------->AHL20(2)                    --------->YAB1           <---------AHL20(2)                   --------->ICU4         <---------AHL20(2)          <---------ICU4                 <---------AHL20(1)          -------->HAHB4                 --------->AHL20(2)          <--------ATHB1                 <---------AHL20(2)          --------->ATHB12            --------->YAB1              ----------->GT1          --------->ATHB51            <---------ICU4             ----------->GT1         <---------ATHB51             <--------ATHB1           ---------->DOF2         --------->AHL20(2)           <--------HAHB4       <---------ANAC46         <---------AHL20(2)           -------->HAHB4 --------->ARR11(3)         <---------YAB1              <---------ATHB12<---------ARR14(2)         --------->ICU4              <---------YAB1  --------->ARR14(2)                         -----    <---------AHL20(2)               --------->AHL20(2)    <---------ANAC58             ---------->DOF2   --------->AHL20(2)  ----------->GT1--------->ATHB51     <---------ANAC58           <---------AHL20(2) ------ARR11(3)    <---------YAB1    --------->ICU4 <------ZmHOX2a(1)                --------->AHL20(2) >GT1  --------->YAB1  --------->YAB1<---------ATHB51<---------ARR11(3)              <---------AHL20(2) ----->ARR11(3)  --------->YAB1    --------->YAB1 <---------TOE2(3)       --------->ARR11(3) --------   atctattaaaaataattggtcataatagtaaaacaactaataattaattttttaggatattgcttaaaagttaaaacatattgctaatttaaaagtcata  18965900                                                                              --------->ANAC58                                                                              --------->ANAC58                                                                              --------->ANAC46         <---------AHL20(2)                               --------->ANAC58   <---------TOE1(2)         <---------YAB1                                   --------->ANAC58   ------->TEIL        --------->AHL20(1)                             --------->SPL7     --------->ANAC58        --------->AHL20(2)                           <---------SPL7       --------->ANAC58 ---->AHL20(2)              --------->YAB1         <---------LBD16----------->GT1 ->YAB1 <---------AHL20(1) <---------YAB1    <----------DOF2 ---------->DOF2 <---------TOE2(2)   atatacaaaatataattgtagtatattctataataaacatgtttcatctttttttcggacgagcaaagaagtaagaacgcacgttatgaccatgatgctc  18966000                                         <---------AHL20(1)                                     --------->YAB1                                     <---------ICU4                                     -------->ATHB1                                    --------->ICU4                                    <---------YAB1                                    --------->AHL20(1)                                    --------->AHL20(2)                                    <---------AHL20(2)          ---------->DOF2                      <---------------AGL15        <---------DAG2                             -------                      --------------->AGL15        <----------DOF2                          <--------         ------>ZmHOX2a(2)   ----------->GT1<---------YAB1   --------->ANAC58               ---------        <------ZmHOX2a(2) --------->ATHB12  <---------AHL20(2) ------->GAMYB               --------->LBD16       <---------ARR11(3) <---------ICU4 --------->AHL20(1)  --------->ANAC58              ------>NtERF2       --------->ARR11(3) -------->HAHB4--------->AHL20(2)  ------->GAMYB                 <---------ETT(1)       <-----------ARR10 <---------YAB1 --------->YAB1     <---------MYB111(1)           <---------LBD16       <---------ARR14(2)--------->ICU4<---------YAB1      --------->MYB46(3)        --------->ANAC58       --------->ARR14(2)<---------ATHB12--------->AHL20(2)<---------MYB55(2)        --------->ANAC58      <------ZmHOX2a(1) <---------TOE2(3)<---------AHL20(2)<---------MYB111(2)     <-----------GT1 <-  ---------->DOF2<----------DOF2 --------->ICU4<-----------GT1--------->MYB46(3) <-----------HVH21 <-   taaaaaaaggatcttattccttttctaatgatggaaaaattattatattattccttttccaacaaccaaagaaaaatcaaaaatgtcacgctccggcaat  18966100                                                                                                 ----                                                                                                 <---                                                                                          ===========                                                 ------>NtERF2                           --------->CCA1(2)                                                 ----------->RAV1(1)                     <---------At4g35610                     <---------------AtSPL3    <---------At4g35610                       ============              ------>ZmHOX2a(1)           ----------->HVH21                              <------ZmHOX2a(2)             --------->TOE2(3)           --------->DEAR3(2)                             --------->ARR11(3)         --------->YAB1                  --------->MYB46(3)                             <---------ARR11(3)       <-----------GT1           <---------AHL20(1)                                     <---------AGP1      <-----------GT1<---------------AtSPL8    --------->At4g35610                      --------->ARR14(2)      --------->YAB1 --------------->AtSPL3   <---------ATERF1(1)                       <---------ARR14(2) -->WOX13(1) --------->TOE1(3)   --------->ARR11(3)                                     --------->AGP1 -MYB52(1) <---------YAB1        --------->AHL20(1)                                    <---------GLK1(1) --->CBF<---------YAB1     <---------MYB59--------->DREB2C(2)                          --------->GLK1(1) --------TOE1(3)     --------------->AtSPL8<-----------HVH21                <----------ID1------>ZmHOX2a(2) --------TOE2(3) ---------->DOF2--------->AHL20(2) *TSS         ---------->DOF2 ---------->DOF2------   taaggtatttatcatccttaaaagaggtaccaaaatatatagaaccgacagcgccataaactttagaaaagagagagagagacaaagagagatctgatcc  18966200                                                      --------->ALFIN1                                                      <---------DEAR3(1)                                                      <---------AtMYB61                                                   --------->DAG2                                                 ---------->DOF2                                         <---------LBD16                                         <---------At4g35610                                         --------->At4g35610 -->ZmHOX2a(1)                         <-----------RAV1(2) -------DOF2                          --------->At4g35610 ===HOX2a_HOX2a                       <---------At4g35610 ===HOX2a_HOX2a                     <---------bZIP60(1)<---------MYB46(3) >ZmHOX2a(2)               ---------->DOF2 <---------MYB46(3)           <---------DEAR3(1)     ------   tttgaagaaacaacaccaaaaaaaaaaaaaaaagaatggcatcagcggatgaaaaggtggtggaagagaaggcttcggtgatttcaagcttgttggacaa  18966300                                                                                    ----------->HVH21                                                                                   ------->MYC3                                                                                   <-------MYC3                                                                                   <-------MYC2                                             --------->ANAC58                      ------->MYC2                                             --------->ANAC58                     --------->bZIP60(2)                                           <------NtERF2                          <---------O2                               --------->KAN4(2)                                  --------->ANAC58                              --------->KAN4(1)                                   --------->TGA1a                              <---------KAN4(1)                                   --------->ANAC46                              <----------TaMYB80                                  --------->O2                              --------->HSFB2a(1)                                 <---------ANAC55(2)                             <---------KAN4(2)     ------->GAMYB                  <---------TGA1a                             ---------->TaMYB80   <------------AtMYB77            --------->ANAC58                             <---------ARR14(2)   ==========================================MYC_MYB                          <---------ANAC46--------->LBD16                         --------->ANAC55(2)                         <---------------------WRI1=========================================MYC_MYB                     --------->At4g35610<---------LBD16                      ----------->HVH21                     --------->ZAT2    ------>NtERF2                        <-----------HVH21                     <---------At4g35610<------NtERF2--------->ALFIN1      <---------ANAC58                     <---------ZAT2   --------->DEAR3(1)                   <---------ANAC58                    --------->GLK1(2) <---------DEAR3(1)--------->SPL7     <---------ANAC46    <-----               --------->LBD16<---------HSFB2a(1)===========================================MYC_MYB              <---------ANAC46--------->HSFC1(2) -------->P<---------------------WRI1        --------             <---------LBD16 --------->ARR14(2) --------->MYB52(1)    ======================bZIP_DOF ---->DOF2<----------DOF2<------NtERF2--------->ANAC46--------->WRKY12---------->DOF2     <---------ANAC46   agccaaaggtttctttgcggagaagctggcgaatattccgacgccggaagcaaccgtggacgacgttgatttcaaaggcgtgacacgtgatggagtagat  18966400                                                        ------>ZmHOX2a(2)                                                        ==================HOX2a_HOX2a                                                       --------->GLK1(1)                          ------>ZmHOX2a(1)            <---------GLK1(1)                          ====================================HOX2a_HOX2a                          =====================================HOX2a_HOX2a                         --------->TOE2(3)             <------ZmHOX2a(2)                        <---------ICU4                 ===================HOX2a_HOX2a                <---------MYB52(1)                    <---------AGP1               <-----------HVH21                      <---------ARR14(2)         --------->ARR14(3)                           --------->ARR11(3)         --------->ARR11(3)                           --------->ARR14(2)         <---------ARR11(3)                           <---------ARR11(3)  --------->ANAC58    --------->ARR14(2)              --------->AGP1  --------->ANAC46    <---------ARR14(2)             <---------CCA1(2)                              <  --------->ANAC58    --------->GLK1(2)      <---------ARR14(2)                               <------ ----GLK1(2)  --------->ANAC46               --------->ARR14(2)    ------>ZmHOX2a(1)   <---------At4g35610 --->ARR10<---------GLK1(1)                 <---------CCA1(2)     --------->TOE2(3)<---------ARR11(3)   tatcacgccaaggtctccgtcaagaatccttactctcaatccatccctatctgccagatctcttacatcctcaagagtgccacaaggtcatcttctcttt  18966500                                                                                      ------>ZmHOX2a(2)                                                                                     <------ZmHOX2a(2)                                                                                    <---------ARR11(3)                                                                                    <-----------ARR10                                                                                    --------->ARR11(3)                                                                                    <---------ARR14(2)                                                                                    <---------AGP1                                                                                    --------->AGP1                                                                                    --------->ARR14(2)                                                                                    <---------ARR11(1)                                                                                   <---------ARR14(1)                                                                                   <---------CCA1(2)                                                                                  --------->LBD16                                                                                 <---------ANAC55(2)                                                                                 <---------HSFB2a(2)                                               --------->AHL20(2)                --------->HSFB2a(2)                                               <---------AHL20(2)          --------->LBD16                                            <----------DOF2               --------->ANAC55(2)                                            <---------DAG2             --------->ARR14(2)                                        --------->ZAT14                <---------ARR14(2)                    ------>ZmHOX2a(2)   <---------ZAT14          --------->YAB1  --------->ANAC55(2)                  <-----------ARR10     --------->ZAT18         <---------YAB1  <---------LBD16 -----------GT1   --------->AGP1        <---------ZAT18    <---------CCA1(2) <---------ARR14(2) ----DOF2 <---------At5g28300<---------ALFIN1  <---------YAB1 --------->YAB1 --------->ARR14(2)   tttttcttcttgtaccgtctgatctactctaacaccgtattgtgcactttttattacacacatatcatgatagtatccgtattccggatctagcctaaga  18966600                                                                                       ------>ZmHOX2a(2)                                                                                      <------ZmHOX2a(2)                                                                                     --------->ARR11(3)                                                                                     --------->ARR14(2)                                                                                     <---------ARR14(2)                                                                                <---------ARR14(2)                                                     <---------AHL20(1)         --------->ARR14(2)                                                     --------->AHL20(1)        <---------CCA1(2)                                             <---------YAB1                <---------ANAC55(1)                                          <---------ARR14(2)               <---------ANAC46                                          --------->GLK1(2)          ---------->ID1  <---------ARR11(3)          ----------->HVH21 --------->At4g35610     --------->AHL20(2)  <---------MYB52(1)        <--    <---------GLK1(2) <---------YAB1      --------->ARR14(2)   <---------RVE1(1)------->TEIL   ------   taaatagaatttgtgacacatattttgatcatctaaattttgagaatatgaaaaatatatatgtgatatttttcgttaagtgtatccgatctttgtacta  18966700  Previous    Next  AGI:  At2g46140.1    Description:  late embryogenesis abundant protein, putative / LEA protein, putative. Identical to Desiccation-related protein At2g46140 [Arabidopsis Thaliana] (GB:O82355;GB:Q8LC67); similar to LEA14 (LATE EMBRYOGENESIS ABUNDANT 14) [Arabidopsis thaliana] (TAIR:AT1G01470.1); similar to desiccation protein [Brassica napus] (GB:AAC67571.1); contains InterPro domain Late embryogenesis abundant protein 2; (InterPro:IPR004864); contains InterPro domain Water Stress and Hypersensitive response (InterPro:IPR013990) Range:  from: 18966151    to: 18967620    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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