Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->ANAC46                                   --------->ANAC58                                   --------->ANAC58                                   --------->ANAC55(2)                                  --------->SPL7                            <---------ARR11(3)                                  <---------LBD16                           <---------ARR14(2)                                 --------->SPL1(1)                          --------->ARR11(3)    <--                                <---------SPL7                     --------->AtMYB61       --------->YAB1       <---------YAB1           --------->ZAT14                    ------->GAMYB          <---------YAB1     --------->YAB1             <---------ZAT14                   --------->MYB46(3)     --------->ARR11(3)     <---------ICU4          <------------------SPL14            -------->P --------->ARR14(2)    ---    <---------ATHB12         --------->At4g35610                --------->WOX13(1)       <---------ARR11(3)    --------->ICU4        <---------ATHB12                     --------->MYB46(3)       --------->YAB1 ----->RAV1(1)       <------NtERF2--------->SPL1(2)--------->GLK1(2) ---------->DOF2   --------->ICU4   cattcaatgatgagaaccatggaggcaaatcaactgtacggaatcaaacagagaatcagatagcatcaaccaaaagaagatagtccaaaatgatcataat  18951800                                                                --------->ZAT2                                                                <---------At4g35610                                                                <---------ZAT2                --------->CCA1(2)                               --------->At4g35610      <---------At4g35610                                    <---------At4g35610      --------->At4g35610                               --------->WOX13(1)     --------->MYB52(1)                                <---------ICU4          ------->TEIL  --------->ANAC46                                    <---------YAB1          <---------CCA1(2)  --------->ANAC58                                  <---------ICU4            <---------GLK1(2)  --------->ANAC58                                  --------->YAB1     --------->DAG2 -------HSFB2a(2)                                  <---------ATHB12   ---------->DOF2 ------>HSFB2a(2)  <-----------GT1    --------->At4g35610    --------->At4g35610   ccagaagcaactgatcagatataacaaatccaattccatttgctgaatttcaaatcatcattcagcagctgaaaaagcttgaatctcagattaaaacaga  18951900                   <---------TOE1(2)                                                   <---------At4g35610                 <---------SPL7                                                     --------->LBD16                <---------ANAC46                                                    --------->At4g35610             <---------CCA1(2)                                                      <------NtERF2         <---------ANAC55(1)                                                -------->ATHB1         <---------ANAC58                                                   <---------ICU4         <---------ANAC58                                                   --------->ATHB51         <---------ANAC55(2)                ----------->RAV1(2)            --------->ICU4         <---------ANAC46            <-----------RAV1(2)                ------------>ATHB5      ----------->HVH21           --------->ARR14(2)              --------->DAG2    <---------At4g35610    <---------REM1(1)             <---------ARR14(2)        --------->At5g28300    --------->ANAC46    <---------bZIP60(1)       <---------LBD16              ----------->GT1 <---------YAB1    --------->bZIP60(1)  ----------->HVH21  --------->At4g35610  ---------->DOF2  <---------LBD16   cctctgatgtaacgtgtatcgtagggtctgacttcggattcagggtacctgaagctcgagaccgtgaaaaagtttccattattgtccgcagcatcttgaa  18952000                                                                          <------MYB83                                                                          <------MYB46(1)                                                                  ----------------->AGL1                     <-------MYC3                                ------>NtERF2                     ------->MYC3                          <---------ARR11(3)                 <---------ZAT18                           --------->ARR11(3)                 --------->ZAT18             ---------->DOF2--------->RVE1(1)              ---------->DOF2          <---------ARR11(3)  <-----------ARR10                     <---            ---------->DOF2            --------->ARR11(3)  --------->GLK1(2)                    -----         <------ZmHOX2a(2)    --------->ANAC46            <---------GLK1(2)       <----------DOF2<---   gacaattacagatcgaaagagcacatgaaaacacgacgagagttcttaaaagcagaaacaaaatctctgccattgtaggtgaaactttctctgagaatta  18952100                                                                              <---------WOX13(1)                                                                             <------------CBF                                                                           --------->ICU4                                                                           <---------YAB1                                                                        *TSS--------->ATHB12                                                                     ---------->ID1                                                               --------->HSFC1(2)           <---------YAB1                                      <---------HSFB2a(1) ------TOE1(3)                                                 --------->HSFB2a(1)           <------- ---->MYB52(1)    <---------ZAT6 >>>>>>>>>TBF1  <---------ICU4 <---------HSFC1(2)            <------- ------TOE2(3)<---------YAB1  >>>>>>>>>TBF1     --------->YAB1<---------KAN4(2)<---------MYB46(3)   agggttttagactcttattagtgtgagtagaagaagaagaagagagagcatcatcactcgagagaattttcgtcgtcttgattgttgaatactgactttt  18952200                                              ------->GAMYB                                             --------->ANAC58                                             --------->ANAC58                                           --------->MYB52(1)                                           ----------->RAV1(1)                                         <------NtERF2                                         ------>NtERF2                                         --------->LBD16                                        --------->RRTF1(3)                                        --------->ANAC58                                        --------->RAP2.3(3)                                        --------->RAP2.6(2)                                        --------->ANAC46                                        --------->RAP2.3(2)                                        --------->DEAR3(1)                                        --------->RRTF1(2)                                        --------->ANAC58                                       <------NtERF2                                       --------->RRTF1(1)                                      ------>NtERF2                      --------->MYB52(1)                                      <---------ATERF1(1)     --------->ANAC55(2)                                   ===================MYC_MYB <---------ANAC58         --------->ATHB12                                   --------->ANAC58           <---------ANAC55(2)      -------->HAHB4                                   --------->TGA1a            <---------ANAC58        --------->ICU4                                   <---------TGA1a            <---------ANAC46        <---------ATHB12                                   --------->ANAC58         <-----------GT1     <-------GAMYB                     <---------MYB52(1)--------->RAP2.3(1) --------->ARR14(2)  ----------->GT1 <----- <-----------GT1    <-----------TGA1 --------->ANAC46      <---------ARR14(2)  <---------MYB46(3) --DAG2----------->GT1             --------->ANAC46   <---------REM1(1) <---------SPL7<---------YAB1 ---DOF2   <---------AHL20(2)   ----------->HVH21  --------->ALFIN1    ------>ZmHOX2a(2) <---------WOX13(1)   tttttacatttgttaaatttttcgtcagttttatctcacgcgccgcaacggaagtgttgtagttacgcgctgatcgaacggttgttaaatgattgggatt  18952300                          <----------DOF2                      <---------CCA1(2)                     <-------MYC2                     ------->MYC2                     ------->MYC3                     <-------MYC3                    <---------ANAC58                    <------NtERF2                            <---------GLK1(1)                    <---------ANAC58                   ------>ZmHOX2a(2)                    <---------ANAC46   <---------ARR14(2)   <---------ARR11(3)                  <---------ANAC58     --------->ARR14(2)   --------->ARR11(3)                  <---------ANAC58 --------->At5g28300<------ZmHOX2a(2)                  <---------ANAC46----------->GT1    --------->ARR14(2)           <-----------ARR10     --------->ANAC55(1) <---------ARR11(3)           --------->ARR11(3)    --------->ANAC46    --------->ARR11(3)                            <-           --------->GLK1(2)     --------->ANAC58    <---------ARR14(2)                        ------     --------->ICU4------>NtERF2 --------->ANAC58   <------ZmHOX2a(1)     <---------ICU4       ------ -----DOF2<---------GLK1(2)   <---------REM1(2)  --------->CCA1(2)----------->GT1 ----------->GT1  <-   tttggtaatgaagaatcttggcgcgtgtcttttacacggtatatcggcgagataggatcttagatattcggtttaatatttatctggtttatatgaataa  18952400           <-----------HVH21          <------MYB46(1)          <------MYB83          <---------MYB46(3)        <--------P      <-----------RAV1(1)      --------->ALFIN1    --------->ANAC55(2)    <---------ANAC55(2)    <---------ANAC58                                                             --------->ANAC58    <---------ANAC58                             <---------YAB1        <---------AHL20(2)    <---------ANAC55(1)                         <---------AHL20(1)     --------->AHL20(2)    <---------ANAC46                            <---------AHL20(2)     --------->AHL20(1) --------------AtSPL8                         <---------AHL20(2)       <---------YAB1 --->AHL20(2)                             --------->AHL20(2)          --------->AHL20(2) --->YAB1<---------AtMYB61                <---------AHL20(2)   ----------->GT1   --------->ANAC58 --------------AtSPL3            <------ZmHOX2a(1) <---------AHL20(2) <---------AHL20(2)  --------->TOE2(3)   tatagtacgtgttggtcagagacaagagtcatataggaacttatttatattattttttcacaagagagataattttattgaacaagacaaaacattagat  18952500                                                       --------------->AGL15                  <------                                                       <---------------AGL15              <----------                           --------->MYB52(1)       ------>MYB83                     <---------CCA1(1)                   ------->GAMYB          <----------ID1                             <---------RVE1(1)                ----------->RAV1(1) --------->AHL20(1)----------------->AGL2        --------->ARR11(3)               --------->ANAC46     <---------AHL20(1)----------------->AGL3        <---------ARR11(3)             --------->ANAC46    --------->CCA1(2)  --------->ANAC58                --------->AHL20(1)             ----------->RAV1(1)--------->ARR11(3)  --------->ANAC58                <---------AHL20(1)             <---------ALFIN1   <---------ARR11(3)  ------>MYB46(1)<------------AtMYB77  <---------AHL20(2)          --------->PCF2--------->YAB1   --------->MYB59   --------->YAB1       ---------->DOF2    --   ggactatgtaatgccccacaacagaaaaataacagatatatattaggccaaaccaagcccataatagaaactgcccatgaaaaaaagatattttatcttt  18952600                                                    --------->ALFIN1                                            --------->ATHB12                                           --------->AHL20(2)                                           --------->AHL20(1)                                           <---------AHL20(2)                                          --------->AHL20(2)                                          <---------AHL20(2)                                       --------->AHL20(2)                                       <---------AHL20(2)                            --------->AHL20(2)     <-----------HVH21                              <--                            <---------AHL20(2)    <---------ANAC58                              ----- ----DOF2              --------->YAB1 --------->AHL20(2)                   <----------DOF2     ------ -GT1               <----------DOF2<----------DOF2<---------ANAC46<---------AHL20(2)           <----- -------->ID1 ---------->DOF2<---------AHL20(2)   <---------ANAC58<---------YAB1  >>>>>>>>>>>>>>>>>LFY   tgtctctctctatacaaaaaggctttgatattaatttcttttaaattaattggggtgagggccttgatattaatgggcttttagcgccaatgtctaattt  18952700  Previous    Next  AGI:  At2g46060.1    Description:  transmembrane protein-related. similar to hypothetical protein [Vitis vinifera] (GB:CAN75717.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39678.1); contains domain PTHR14319 (PTHR14319) Range:  from: 18948172    to: 18952172    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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