Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             ---------->DOF2                                    <---------TOE2(3)    --------->ANAC58        <---------YAB1                    <---------TOE1(3)    --------->ANAC58      --------->MYB52(1)            <------NtERF2    --------->ANAC46     --------->TOE1(2)           <---------LBD16 <------ZmHOX2a(2)     ------->TEIL           --------->GLK1(2)                   --------->YAB1 -------->ARR11(3)  --------->ANAC58--------->ARR11(3) --------->LBD16      --------->LBD16 ---------ARR11(3)  --------->ANAC58<---------ARR11(3)<---------ANAC46    <---------LBD16--------->AHL20(2)   aagatcaaggaactaaagaatcacgaacttacgattaagacctcagagattccatggcggaattagggtttttttaagcgggaaacataaaaaaaatcga  18945100                   <---------MYB52(1)               <-----------GT1               ---------->ID1              <-----------GT1                                 ------>NtERF2      <------ZmHOX2a(1)                                      --------->ANAC58    <---------TOE1(3)                         <---------ALFIN1<------NtERF2    <---------TOE2(3)               --------->RAP2.6(3)      --------->ANAC58           --------->ALFIN1 <---------AHL20(2)<----------DOF2  <---------LBD16          --------->ANAC46   <----------DOF2   aattttaaggaagttttttccctttggcaaaaccctataccggcttccccacttccccttggcccgccatttctctctctctctttcgaggtttgggttt  18945200                                                             <---------MYB52(1)                >>>>>>>>>TBF1                        <-------TEIL   ------>ZmHOX2a(1)       ----------->HVH21                            --------->CCA1(2)     <------MYB83                                  <---------ARR14(2)     <------MYB46(1)                               --------->ARR14(2)XXXXXXXXXXXXXXXXXXXX>MIR825----- <---------MYB46(3)                           ----------->RAV1(1)  --------->TOE2(3)       <---------   cgatggatggtgaccgaagaagaagtttagggtcaaaaatcaaatttcccacagatacagacccttattcctcaaaaaatcgaataaactaattttcccc  18945300                                                                      --------->ARR14(2)                                                                      <---------ARR14(2)                                                                    --------->LBD16                                                                   --------->ANAC55(2)                             --------->ANAC58                      <---------ANAC46                             --------->ANAC46                      <---------ANAC55(2)              <                             <---------ANAC55(2)             <---------AHL20(2)                  ----                             --------->ANAC55(2)            --------->YAB1                      <----      ----------->GT1        --------->ANAC58              <---------YAB1       --------->TOE2(3)<---     <---------TOE1(3)    <---------ARR14(2)              <---------AHL20(2)    <---------DAG2  -----     <---------TOE2(3)    --------->TOE1(2)               --------->AHL20(2)  -------->P  ----------- ---->LBD16        ----------->GT1                       --------->YAB1    <---------MYB52(2)  ------ --GT1<---------ZAT6      --------->ARR14(2)     <------ZmHOX2a(1)<---------LBD16<----------DOF2<----   caaaattagggttactaaacaatgtgaaaatacgaaacttgcaaacgaagaggattagattataatattgcggaatcactaacctttttgtctagtaatt  18945400            --------->ARR11(3)            <---------ARR11(3)         <---------AHL20(2)     --------->AHL20(2) <---------AHL20(2) ---------AHL20(2) ----->AHL20(2) -----AHL20(2)                                                                                    --- ------AHL20(2)                 <---------At4g35610                                              <--- ---->AHL20(2)                  <---------ZAT2                                         ----------->GT1 >GT1<---------AHL20(2)         --------->At4g35610              <---------AHL20(2)--------->ANAC58 --->ICU4--------->AHL20(2)    <-----------RAV1(1) <---------ETT(2)                --------->ANAC58 -----AHL20(1)    <----------DOF2         <---------TOE2(3)     <----------DOF2 --------->At4g35610   tttttatttatataaatcttctttctgtagtttctgctggtattaagaaaatgtagacaaaatgggttttattgaatgaagcagcacgacggtttatata  18945500                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                               ------                                                                ----------->TGA1              -------                                                              <---------At4g35610     <---------ICU4                                                              --------->At4g35610     <---------AHL20(2)                                                          <-----------HVH21       --------->AHL20(2)                                                       --------->At4g35610     ----------->GT1-------                                                       <---------At4g35610 --------->ZAT6  <---------                                                 <---------AHL20(1)      <-----------GT1  <----------                                                 --------->AHL20(1)<---------ANAC46   --------->AHL20(2)       --------->ATHB12                        <---------AHL20(1)  <---------ANAC58   --------->ATHB51 ------->DOF2       *TSS                       --------->AHL20(1)  <---------ANAC58  --------->ICU4 ------AHL20(2)    ---------->DOF2            --------->AHL20(2)----------->HVH21 <---------AHL20(2)   taaagagactcattggaaaatgaaagagagagagacccataccatcaaatatatattagctgtcatatgacgttttaactctagttaattatttaaccca  18945600    <--------P  <---------MYB46(3) ------>AtMYB61 -------ALFIN1 ----->MYB46(3) ->MYB46(1) ->MYB83       <---------AHL20(2) --->ANAC46   --------->AHL20(2) -->MYB46(3)  <---------AHL20(1) --------->ANAC58                                        ----------->GT1 >GAMYB       <---------AHL20(2) --------->ANAC58                            <----------DOF2<-------- --GT1    <---------AHL20(2)    --------->DAG2                     <---------AHL20(2)  <---------ANAC46 -GT1  ----------->GT1         ---------->DOF2          ------->TEIL--------->ATHB12 ------>NtERF2   ccactggttgagttaatttttttttgcaaaccaaaaagcaagagacattgagaggttgcaccttgtggttttattggctctttttggggccttgtaacat  18945700                                                                                                   --                                                                                                   <x                                                                                                   <x                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                 <xxx                                                                                                 <---                                                                                                 <---                                                                                                 <xxx                                                                                                <xxxx                                                                                              <xxxxxx                                                                                             <xxxxxxx                                                                                             <-------                                                                                             <xxxxxxx                                                                                            <xxxxxxxx                                                 <-------TEIL                              <xxxxxxxxx                                                 ------->TEIL                              <xxxxxxxxx                                             --------------->AtSPL8          <---------AHL20(1) <xxxx                                             <---------------AtSPL8          <---------AHL20(2)<xxxxx           --------->YAB1                    --------------->AtSPL3<---------AHL20(2)     --------->ANAC58          <---------YAB1               <---------GLK1(2)           --------->AHL20(2)     --------->ANAC46         <---------AHL20(2)            <---------ARR11(3)         --------->AHL20(2)      --------->ANAC58         --------->AHL20(2)            --------->ARR11(3)      <---------AHL20(2)         <xxxxxxxxxx   <---------GLK1(2)                 <---------TOE2(3)         --------->AHL20(2) <---------AHL20(2) <---------TOE2(3)                   <---------TOE1(3)        --------->AHL20(2)  --------->AHL20(2) ---GT1<---------YAB1             <---------AHL20(2)   --------->AHL20(2)    --------->AHL20(2)<xxxxx   gtttagattatttttataatgcaaaataagttttattttaagattttgatgtacatttttaatataaaattaattctattttatttaaatcaacgcattt  18945800            <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          <xxxxxxxxxxxxxxxxxxsmallRNA(se3)         <---------ZAT2         --------->At4g35610         <---------STY1(2)         --------->ZAT2       <xxxxxxxxxxxxxxxxxsmallRNA(se3)     <xxxxxxxxxxxxxxxxxxsmallRNA(se3)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <xxxxxxxxxxxxxxxxxxsmallRNA(se3) ------->LBD16  <---------LBD16 xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxsmallRNA(s) -------HSFB2a(2) ------>HSFB2a(2) -------LBD16 <---------AGP1 xxxxxxxxxxxxxxxxsmallRNA(fl3) ------LBD16<xxxxxxxxxxxxxxxxsmallRNA(s) ------ANAC46<---------ZAT2 xxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxsmallRNA(l2) ---DOF2 --------->STY1(2)                   ----------->GT1 xxxxxxxxxxxxxxsmallRNA(si3)              <--------ATHB1 xxxxxxxxxxxxxxxxxxxsmallRNA(se3)         <---------ICU4 xxxxxxxxxxxxxxsmallRNA(se3)              --------->YAB1                                   --------->YAB1 xxxxxxxxxxxxxxsmallRNA(fl3)             <---------ATHB12                                  -------->HAHB4 xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       <---------ATHB51                                 <---------YAB1 xxxxxxxxxxxxxxxxxsmallRNA(le3)          --------->ICU4                                 --------->YAB1 xxxxxxxxxxxxxsmallRNA(s2)           <---------ATHB12                        <----------DOF2 xxxxxxxxxxxxxxxxsmallRNA(le3)     --------->WOX13(1)               --------->ZAT6   --------->YAB1   cggggagaaccagctagctctgggttcgagtggctattaatcaataatggaaaatttgaatagtcatttaagactgcttctttagaagaataataataga  18945900                                                                 --------->AHL20(2)                                                                --------->AHL20(2)                                                     --------->ATHB51                                                     <---------AHL20(2)                                                     --------->ATHB12                                                     <---------ICU4                                                     -------->HAHB4                                                     -------->ATHB1                                                    <---------ATHB51                                                    <---------YAB1        <----------DOF2                                                  --------->YAB1<---------AHL20(2)                                                 <---------YAB1<---------YAB1                                                 <---------AHL20(2) --------->ARR11(3)                                                 --------->AHL20(2) <---------AHL20(2)                                                --------->AHL20(1)  --------->AHL20(1)       <-----------GT1                          <---------AHL20(1)  <---------AHL20(1)  --------->AHL20(2)                ---------->DOF2 --------->ICU4  <---------ARR11(3)  <---------AHL20(2)            <---------ZAT6  --------->AHL20(2)  --------->AHL20(2) --------->AHL20(2)      --------->AHL20(2)    --------->YAB1  --------->ICU4  <-----------GT1  <----   atatttaatttacttcttaatttctgaaaaaatactgttaaagtcttaaatataattattggataattaatatattctttttaactcgctaagaagtgat  18946000  Previous    Next  AGI:  At2g46040.1    Description:  ARID/BRIGHT DNA-binding domain-containing protein / ELM2 domain-containing protein. similar to ARID/BRIGHT DNA-binding domain-containing protein / ELM2 domain-containing protein / Myb-like DNA-binding domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G11400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39684.1); contains InterPro domain AT-rich interaction region; (InterPro:IPR001606); contains InterPro domain ELM2 (InterPro:IPR000949) Range:  from: 18942374    to: 18945520    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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