Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------DEAR3(1)                               --------->ALFIN1                               <---------AtMYB61                             <---------MYB46(3)                            --------->ALFIN1                                   --------->LBD16                            <---------AtMYB61                                  <---------LBD16                          <------MYB46(1)                              <------NtERF2                          <------MYB83                                 --------->ATERF1(1)                          <---------MYB46(3)                          <---------RAP2.3(1)                         <---------AtMYB61                            ------>NtERF2                         --------->MYB111(2)                         <---------ANAC46                         --------->MYB111(1)                         <---------RAP2.3(2)                         <---------MYB46(3)                          <---------bZIP60(1)                         --------->MYB55(2)                          <---------RAP2.3(3)                         --------->MYB46(2)                          <---------ATERF1(2)                         --------->ALFIN1                            --------->ATERF1(2)                         <---------DEAR3(1)  <------ZmHOX2a(1)       <---------RAP2.6(2)                        <--------P<---------ANAC46                --------->ALFIN1    ----------->GT1                        <---------MYB55(1)<------ZmHOX2a(1)     <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ------>TEIL       --------->MYB52(1)   --------->ALFIN1        <-----------RAV1(1) <xxxxxxxxxxxxxxxx >HSFB2a(2)     --------->ANAC58  --------->ALFIN1 --------->TOE2(2) <---------DEAR3(1) >YAB1          --------->ANAC58<---------MYB46(3) --------->TOE1(2)--------->RAP2.6(3) >TOE2(3)       <---------ANAC55(2)    <------ZmHOX2a(1)    --------->ZAT18  <---------LBD16   tgtatcagactaaacatcaagtaagggttggtggtggtggaggaggaggagaacatacgaagggtactgtggcggcatctctggggaagagtaagaagta  18909700                                                                           ---------->DOF2                                                                   <-----------GT1                                                               <---------AHL20(1)                    ---------->DOF2                            --------->AHL20(1)                  --------->ANAC58                             <---------AHL20(2)           ----------->GT1                                     --------->AHL20(2)           ---------          <------ZmHOX2a(1)                                <---------AHL20(2)       --------->LBD16         ----------->GT1 ----------->GT1                   --------->AHL20(2)      <---------ANAC46        ------------------------>ANAC81--------->ARR11(3) --------->AHL20(2)      <---------LBD16 xxxxsmallRNA(fl3)--------->ANAC58 ---------->DOF2 <------ZmHOX2a(1)--------->MYB52(1)      <--------   gacacataagaaggagaaaaacgaaagaggttatacaaaaagaactagagagaggatagatttaattaattaccagagaaagtttgcggagagaggtctt  18909800                                                                                                  <--                                                                                             ------>ZmHOX2a(2)                                                                                            <------ZmHOX2a(2)                                                    <---------ANAC46                        ---------         <------NtERF2                        <--------P                                   <---------        --------->LBD16                      <---------ANAC58                              --------->ARR14(2)       <---------DEAR3(1)                    <---------ANAC58                              <---------ARR14(2)       <---------ANAC46                      <-------GAMYB             *TSS                <---------ARR11(3)      <---------LBD16----------->HVH21      <---------MYB46(3)      ---------->DOF2        <---------AGP1 >ARR11(3)    --------->At4g35610           <------MYB46(1)      <---------------AGL15     --------->AGP1 -ARR11(3) ---------->DOF2                  <------MYB83         --------------->AGL15     --------->ARR11(3)   ggaagagaggcggagaagcagagatgacatagctaatagcttcgcttggttgctctgtgtgtttcttctctaaagggttttcgagttagtcaagatctaa  18909900                                                  <-----------GT1                                                 <---------YAB1                                               --------->YAB1                                               <---------ICU4                                               -------->ATHB1                          <-------MYC3                         --------->DAG2        <--------HAHB4                          ------->MYC3                        ---------->DOF2        --------->ATHB51                       --------->ANAC46     ---------->DOF2--------->ANAC58          --------->ICU4                     <-----------GT1 -------ICU4        --------->ANAC58          <---------ATHB12           ----------------------->TaNAC69(2) >CCA1(2)  <---------ANAC58                   <---------ATHB51           <----------DOF2  <---------- --ARR10   <---------ANAC58               ------------>CBF         <----------DOF2    --------->O2  <   ttaagaccaaagtgcttgccacaagaaaaaggagaagtagggttctcaattattactagagagatgtctctttctctttattttttccacgtttctctcg  18910000                                                                                          ------>MYB83                                                                                          -------->P                                                                                        <---------MYB111(2)                                                                                        --------->DEAR3(1)                                               <---------ALFIN1                         <---------MYB55(2)                                               ----------->RAV1(1)                      <---------MYB46(2)                                              <------NtERF2                             --------->MYB46(3)                                             <---------RAP2.6(3)                        <---------MYB111(1)                                             ------>NtERF2                              --------->AtMYB61                                            --------->bZIP60(1)                        --------->MYB46(3)                                            --------->RAP2.3(2)                       *TSS------>MYB46(1)                                            <---------ATERF1(2)                      <---------ALFIN1                                            --------->RAP2.6(2)                      --------->AtMYB61                                            --------->ATERF1(2)                     --------->MYB46(3)                                            --------->ANAC46                      --------->DEAR3(1)                                            --------->RAP2.3(3)                   --------->AtMYB61                                            --------->DEAR3(1)                    <---------ALFIN1                                           --------->RAP2.3(1)                   --------->MYB46(3)                                      xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     ------>ZmHOX2a(1)   <---                                    --------->LBD16                       ------>ZmHOX2a(1)   <------      ------>ZmHOX2a(1)           <---------LBD16                        <---------ALFIN1--------->MYB55(1)  <-----------GT1                 --------->LBD16             <---------TOE1(2)--------->ANAC46  <--- --------------ANAC81    <-----------GT1  <---------ATERF1(1) <---------TOE2(2)<---------ALFIN1  ---- -----------GT1   xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) <---------ZAT18   ------>ZmHOX2a(1)<---------ALFIN1   tttttctccttcttatgtgtctacttcttactcttccccagagatgccgccacagtacccttcgtatgttctcctcctcctccaccaccaccaaccctta  18910100                                               ----------->HVH21                                        <---------ATERF1(1)                                        --------->At4g35610                                        <---------DEAR3(2)                        <---------REM1(1)  <---------ZAT14                      --------->At4g35610------->PIF5 <---------ZAT2                      <---------At4g35610<-------PIF5 <---------GLK1(1)          <-----------HVH21            <---------DREB2C(2)         <---------WRKY18(1)         <---------bZIP60(1)           <---------MYB46(3)         ----------->HVH21         --------->TGA2(1)      <---------ALFIN1      --------->ZAT2  <---------LBD16               -         --------->bZIP60(1)    ----------->RAV1(1)   --------->At4g35610                          <- ------ANAC58 --------->ANAC55(2)      <---------DEAR3(1)<---------LBD16     --------->ANAC58 ------- ---MYB52(1)<-----------GT1  --------->PCF2--------->ZAT14 --------->LBD16   --------->ANAC58-------- ------ANAC58 <---------ANAC55(2) <---------ALFIN1    --------->GLK1(1) --------->LBD16    <---------At5g28300 ----->ANAC55(2)     <---------YAB1 --------->ANAC46  <---------At4g35610------>NtERF2    <----------   cttgatgtattatgtcacctattctgatgaagccccacaggccggtgcaatgacagagctccgcatgtttgacccggccaaggaagagtatttcaccgtc  18910200                                              <---------HSFC1(2)                                              --------->HSFC1(2)                                              --------->HSFB2a(1)                                              <---------HSFB2a(1)                                             --------->HSFB2a(1)                        <-------GAMYB   <---------ANAC46    --------->ANAC58   <---------MYB46(3)    <---------HSFB2a(1)     <---------ANAC58    --------->ANAC58   <------MYB83   <------MYB83           <XXXXXXXXXXXXXXXXXXXXMIR169D-G    --------->ANAC46   ----------->GT1<------MYB46(1)       <XXXXXXXXXXXXXXXXXXXXMIR169A -------->YAB1         <------MYB46(1)<---------ZAT2  <---------MYB46(3) --------YAB1        <--------P      --------->ALFIN1 --------->ATHB12 -->ORA47(1)   ---------->DOF2       <---------MYB46(3)   <------MYB46(1) ->DEAR3(1)  <---------HSFB2a(2)     --------->MYB55(2)   <------MYB83   ---------->ARF1    <-------- -GT1        --------->HSFB2a(2)     --------->MYB111(2)<--------P   <---------ANAC58      --------->ICU4   catgataagccacttcccaaagagttggttaagtcgaggctggtgggaagttcccatggttggggagtttttcttggctcccctaattccatactaatta  18910300                                                                                                   <-                                                                                                   --                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                        --------->ANAC46                         <---                  --------->At4g35610                  <---------LBD16                           <---                  <---------At4g35610                 <---------ALFIN1                      ---------                  --------->ZAT2                     <---------REM1(2)                    ===========                  <---------ZAT2                    ------>NtERF2                         <--------P                <---------ALFIN1                 ------>NtERF2      --------->ZAT6      <---------MYB46(3) -ICU4--------->ZAT14     <---------ATHB12 ------>ZmHOX2a(2)    <---------YAB1 --------->ICU4   <----   gcgactactgcaatccctccagctccaaatcaaaccccaagatgatccctctgcctccacggagttatgaacactcttgtcaaaatgaattggttagtgg  18910400                                                               <-------GAMYB                                                               <---------ANAC46                                                              <---------DEAR3(2)                                                              --------->MYB55(2)                                                              <---------MYB46(3)                                                           <-----------HVH21                                                          --------->TGA1a                                                          <---------DEAR3(1)                                                          <---------O2                                                          --------->O2                                                          <---------bZIP60(2)                                                          =============MYC_MYB                                                          --------->bZIP60(1)                                                          <---------TGA1a -----NtERF2                                              <---------bZIP60(1) ------->ALFIN1                                          --------->SPL7 ------O2                                              ----------->HVH21             <---------WRKY12 ----->O2                                            <---------O2                    <---------WRKY38(1) ------ANAC46                                        <---------ANAC55(2)            --------->WRKY18(1) ------bZIP60(2)                                     --------->ANAC55(2)           <--------ZAP1 ------ANAC58          >>>>>>>>>TBF1                 --------->O2                <------NtERF2 ------TGA1a      ------>ZmHOX2a(1)                 <---------LBD16      <-----------GT1 ------ANAC58   ----------->RAV1(2)               <---------ZAT14     <---------ARR14(2)            < >MYB52(2)------>ZmHOX2a(1)                      <-----------HVH21 ----------->GT1 <-----------HVH21- ======MYC_MYB  <---------LBD16            <-----------HVH21 <---------ANAC46--------->ANAC46       - -------------------TaNAC69(2)     <---------MYB52(1)--------->ANAC46 --------->ARR14(2)       ------   cgtggcaatgtcctcttctcctgaagaagaagacttcgttatggctgtcaagttcacgggacgtcgggtgagtatatacaggcccggtcaacatcgtaag  18910500             <---------ANAC46         <----------DOF2                                                             --------->ANAC46   --------->DEAR3(1)                                                                --------->ANAC58   <---------ALFIN1                                                                  --------->AtLEC2   --------->AtMYB61                                                                 --------->ANAC58  <---------MYB55(2)                                                          --------->ARR14(2)  --------->MYB46(3)                                                          <---------ARR14(2)    -  <---------ABI4(2)  <---------ZAT14                                     --------->MYB52(1)    ------ ---------ARR14(2)   --------->ZAT14        --------->ANAC46            <---------WRKY12       <----- -------->PCF2     --------->ANAC46         --------->ANAC58           <------ZmHOX2a(2)      <------ -------->ARR14(2)--------->At4g35610       --------->ANAC58          --------->ARR11(3)    <-------- --->DAG2<---------DAG2          --------->AHL20(2)                   <---------ARR11(3)    ---------   gggaaccaccgcttttcgtctactgaactgttcgattattttgaacaagccaacttgatgtattccaagagagatcaacggttctacatgccaagttctg  18910600  Previous    Next  AGI:  At2g45930.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G16090.1) Range:  from: 18908465    to: 18909871    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g45940.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G16080.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174) Range:  from: 18910086    to: 18911398    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version