Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---              <------ZmHOX2a(1)                                                              --------     <---------------AGL15                                                              <---------ANAC58     --------------->AGL15                                                  <-----------GT1<---------ZAT14    <-----------------AGL3                                        --------->HSFB2a(2)   <---------ANAC58   <---------At4g35610                                            <---------HSFB2a(2)   <---------ANAC46   --------->At4g35610                                          --------->ZAT2       <---------GLK1(1) --------ANAC58                             <---------ANAC58    <---------ZAT2       <---------WOX13(1) --------ANAC58                             <---------ANAC46    ----------->RAV1(2) <---------ANAC58 -----DOF2  <---------TOE2(3)               <---------ANAC58  <---------ALFIN1      <---------ANAC58   tgcttagctaaaattaggatgagtcttacatttttagtcaagactatcgtgtaagacttgttttccacctggaagaagttaccttggattgcctatagtg  18905800                                                                    ------>NtERF2                                                                    <---------RAP2.3(1)                                                                    <<<<<<<<<AtERF-1                                                                    <<<<<<<<<AtERF-4                                                                    <---------ERF1                                                                    <---------MYB46(3)                                                                    <<<<<<<<<AtERF-2                                                                    <<<<<<<<<AtERF-5                                                                    <<<<<<<<<AtERF-3                                                                   <---------RAP2.6(2)                                                                   <---------ATERF1(2)                                                                   <---------RAP2.3(3)                                                      <-----------RAV1(2)       <---------ARR14(2)                                                    <-----------HVH21<------NtERF2                                                   <---------PCF2  <---------ANAC46                                                 <---------ZAT18   --------->ATERF1(2)                                      --------->AHL20(2)           <---------RAP2.3(2)  <---------AHL20(2)            --------->YAB1  --------->ALFIN1   <---------DEAR3(1)          <----- <---------YAB1         <---------YAB1<---------AHL20(2)          <---------LBD16        <---------AHL20(2) ------>ICU4        <---------ANAC58<---------ANAC55(2)           --------->RAP2.6(3)   --------->YAB1 ->YAB1 ------->TEIL<---------ANAC58--------->ANAC55(2)--------->MYB59          --------->MYB52(1)<--   atttttaatgaactcttaaaattcttgtgattaatcttacttaattagcagtggggtcaggtcgttttggcggctagtggcataactgtataaaaattca  18905900                        --------->ANAC46                      --------->MYB52(1)                      ---------->DOF2                      ------>MYB83                      ------>MYB46(1)       ------>MYB46(1)                    <---------MYB52(2)      ------>MYB83                    <---------MYB46(2)      -------->P                    --------->AtMYB61      --------->MYB55(1)                    <---------MYB59       --------->DEAR3(1)             --------->ANAC58             <---------MYB46(2)             --------->ANAC58             --------->MYB46(3)        <---------TOE2(3)  --------->DEAR3(1)----------->RAV1(2)          --------->ARR14(2)  --------->ZAT18   <---------MYB111(1)   <---------MYB111(2)             <---------ARR14(2)       <-  --------->ZAT14 ------>MYB46(1) ---------->DOF2                         <---------ARR11(3)       <-  <---------ZAT14 -------->P------>NtERF2 <---------MYB111(1)             <---------GLK1(2)        <- ----LBD16 <--------P--------->MYB55(1)   --------->AtMYB61              <------ZmHOX2a(1)----------- ----ZmHOX2a(1)   ------>MYB83 <----------DOF2                  <---------ARR14(2) ---------->DOF2<--   ggattgcactgaggtaagccaacctaacgcagcctttaaagacaccaacctggaaaatgctgagagtattcttcaggattttctcaaaagtcttgtgaaa  18906000                     <---------DDF1                    >>>>>>>>>>bZIP23                   <---------YAB1                    --------->ETT(2)                <----------DOF2     <---------MYB46(3)        <-- --------ANAC46     <<<<<<<<<<bZIP19          <-----------RAV1(1)     <---------ANAC58          <---- --------ANAC58     <<<<<<<<<<bZIP23      --------->ARR14(2)          <---------ANAC46         <----- --------ANAC58     <---------ETT(2)      --------->ARR11(3)          <---------ANAC58--------->DAG2< >GT1               >>>>>>>>>>bZIP19      <---------GLK1(2)   ------>ZmHOX2a(1)      ---------->DOF2- -----TEIL         --------->DDF1         <---------ARR14(2)  --------->LBD16---------->DOF2   ------   ttcgtgtatttgtgtcaatatgtcgacatttctcttcatacacagatactgtcgcttttgattcctggtttggcttgttgaaagtcaaaaagccttcatt  18906100                                                        --------->WRKY12                                                      <-------GAMYB                                                     <---------MYB46(3)                                                    --------->ALFIN1        <---------YAB1                             --------->LBD16      <---------ANAC55(2)                         <---------ANAC58      --------->ANAC55(2)        <------MYB46(1)  <---------ANAC58 -------YAB1               <---------TOE2(3)      <---------ANAC46 -----ICU4      <---------GLK1(2)<------MYB83   --------->SPL7<---------ANAC58 ----YAB1      <---------At4g35610        <------------CBF    <---------ANAC58                    <-- ---------AHL20(2)         <---------TOE1(3)    <---------At5g28300 <---------AtLEC2            <---- -------->AHL20(2)     <----------DOF2   --------->ATHB12*TSS <---------ANAC46 --------->TOE2(2)<---- --->ICU4      --------->At4g35610     <-----------TGA1<---------WOX13(1)      --------->TOE1(2)<----   attttaatacatgattcagcttctgcgttaaggctaggtttcgtcattggtaccgtggttgacttcgtgtgcatgttataacataagaaaatgttcttgc  18906200    <---------WOX13(1)   <---------ANAC58   <---------ANAC58  --------->ATHB12 <---------YAB1 -------MYB46(3)            <---------At4g35610                               <---------ANAC58      < -----ANAC58                <---------CCA1(2)                                 <---------ANAC46      < -----ANAC46    <---------MYB52(1)   ---------->ID1                  --------->KAN4(2)              < -----ANAC58   <-----------HVH21<----------DOF2       <---------TOE2(3)       <---------ANAC58    <--   ttgttgattgctccctctgttagataagtcatctcttttctcgtattgcaaattttaagtttgttcttgtttattctcttgagtgaattagaggtatgtt  18906300                                            --------->AtLEC2                                            --------->ANAC58                                            --------->ANAC46                                 --------->At4g35610                                 <---------HSFC1(2)                                 <---------HSFB2a(1)               <---------ANAC58  --------->HSFB2a(1)               <---------ANAC46================HOX2a_HOX2a --------->ALFIN1                   -------   <---------ZAT14          --------->CCA1(2)           --------->DAG2                       --------   --------->ZAT14  <-------GAMYB--------->HSFC1(2)    ---------->DOF2                       -------- ---------ANAC46   --------->ALFIN1         --------->ANAC58                                 -------- ---------ANAC58   <-----------RAV1(1)  <------ZmHOX2a(2)  <-----------RAV1(1)         --------->TOE2(3) ---------ANAC58 --------->ALFIN1--------->ZAT2---------->DOF2                         --------->TOE1(3) -------YAB1   <---------ANAC58<------ZmHOX2a(1)    <----------ID1                   ------>NtERF2   ttgagtgttctcatatggagtgtgttggagataggagcttcgatccaagcaaaggggaaaagtgttggcttcatgaggcttcgatgcagccttaaacgct  18906400                                                             --------->At4g35610                                                             <---------At4g35610                    <                                                          --------->At4g35610                       <                                                          --------->ZAT2                            <                                                          <---------ZAT2                            <                                                          <---------At4g35610                       <     --------->ANAC46                                   <-----------RAV1(2)                         <     --------->ANAC58                                  --------->At4g35610                   <-------     --------->ANAC58                                  --------->ZAT2             <-----------RAV1(1) ---->GT1 --------->ANAC58                             <---------ZAT2         --------->CCA1(2)    <- ->ANAC58 --------->ANAC58        --------->ATHB12     <---------At4g35610   --------->ARR11(3)  ---- ->ANAC58 --------->ANAC46       --------->ICU4 <---------GLK1(2)            <---------ARR11(3)------ ->ANAC46 --------->AtLEC2     <---------At4g35610<-------TEIL    <---------WOX13(1)      --------->ALFIN1   aaaatccaggccaagcaagatggagatagagagagatgatgggcaaatcaggttcgcagcagctgctgatggatgagaagatatatgttgcagtggggag  18906500                                                                                <---------ALFIN1                                                                              ------>MYB83                                                                              ------>MYB46(1)                                                                             --------->ANAC46    --------->HSFB2a(2)                                                      --------->ANAC58   <---------LBD16                                                           --------->ANAC58 ---------ANAC46                                                            --------->MYB46(3) ---------O2                                                               <---------At4g35610 ---------ANAC58                                                      ------->MYC3 ---------TGA1a                                                       ------->MYC2 ---------bZIP60(2)                                                   <-------MYC3--------->ANAC58 ---------ANAC58                                                      <-------MYC2--------->ANAC58 --ANAC46     --------->ZAT18                  <------NtERF2       <---------ALFIN1 ----------------------TaNAC69(2)     --------->ZAT14 <---------GLK1(1) --------->WRKY38(1)     ----- ------->HVH21<---------ZAT18         <---------ZAT14 --------->GLK1(1) <-------TEIL       ---------- ----->GT1    --------->ZAT14        <<<<<<<<<<<<<<<<<LFY    --------->ARR14(2)--------->MYB46(3)  <-   tgacttggggaacaagtccactcttgtttgggcgatacagaacactggaggcaaggagttctgtatcgtccacgttcaccagccactctacagaaaagaa  18906600                   ------>ZmHOX2a(1)                   --------->LBD16                --------->GLK1(2)                <------ZmHOX2a(2)               --------->ARR14(2)               <---------ARR14(2)               <---------ARR11(3)               --------->ARR11(3)          --------->ANAC46               --------->ARR14(3)          --------->ANAC58               <---------ARR14(3)          --------->ANAC58                                     -----  ---------->DOF2------>ZmHOX2a(2)   ---------->DOF2                                  --------->ATHB12 ----->DOF2    <---------GLK1(2)------>MYB46(1)                                    --------->ANAC55(2) >DOF2     ---------->DOF2    --------->TOE1(2)                   <-----------GT1  <---------ANAC55(2) ---------ID1 --------->RVE1(1) ------>MYB83          <---------MYB52(1)     <---------ANAC46<-------   aaggaaaagacacaaaagatcctggacaaatacctacaaaaatgcaggcaaatgcaggtatgtttttgttacttctattgcgaataagtgatttgatgat  18906700  Previous    Next  AGI:  At2g45920.1    Description:  U-box domain-containing protein. similar to U-box domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G61390.2); similar to Os10g0552400 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065331.1); similar to hypothetical protein OsI_033419 [Oryza sativa (indica cultivar-group)] (GB:EAY79460.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain U box; (InterPro:IPR003613) Range:  from: 18906157    to: 18908376    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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