Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------ATHB12                                                            <---------ANAC46    --------->WOX13(1)            <---------At4g35610                             <---------ANAC58 --------->ANAC58  <---------ARR11(3)                                        <---------DAG2 --------->ANAC46  --------->ARR11(3)        ------>ZmHOX2a(1)               <----------DOF2 --------->ANAC58 <---------CCA1(2)      <---------ARR14(2)               <---------ALFIN1 -->YAB1          <---------GLK1(1)      --------->ARR14(2)   --------->ARR14(2)  <---------ANAC58 ---ICU4        --------->YAB1    --------->At4g35610   <----------DOF2 <---------ALFIN1 --YAB1--------->YAB1            <-----------RAV1(1)  ------>ZmHOX2a(1)----------->HVH21         ----   caccagcaatcaaaacattgatatcttcactgattttgctgcaggtcctacttctcctctttcggtttctcgcctcacacttttgcgtagtcttctcatc  18895300                                                              --------->ANAC46                                                 --------->LBD16                  <---------ANAC58               ------>ZmHOX2a(1)    <---------ZAT2<---------ANAC58             ----------->RAV1(2)    --------->At4g35610                        =======================RAV --------->REM1(1)    <---------At4g35610              --------->At4g35610  ----------->RAV1(1)                   ----- ----->WOX13(1) --------->GLK1(2)    <---------At4g35610 --------->MYB46(3)                 <--------   aatctcagcttctatgagtttcttgacactctgcatttcagcttcactctcctgagacaacaacacaaaacaatctacatcagtttttggcattttacac  18895400                                                                       --------->At4g35610        ---   --------->ANAC58                                                    <---------ZAT2             ---   --------->ANAC58                        <---------ARR11(3)     --------->ANAC58                ---  --------->DAG2                           --------->ARR11(3)     --------->ANAC58              ----- ---------->DOF2                       ---------->DOF2            --------->ANAC46  --------->TOE2(3) ---->ANAC46                     --------->TOE2(3)          <-----------HVH21       --------->TOE1(3) ---GT1                  ----------->RAV1(1)          <-----------HVH21<---------At4g35610      <----   aaaaaaagcaagtttgattcttgaatccaacaaaaacttaacaaagacctcatcacagtcacagtcacaagtaagctgcttctcaaccttagtctcaaac  18895500         <---------ANAC58         <---------ANAC58                 --------->ARR14(2)       <-----------GT1                    --------->GLK1(2)    <---------ICU4                        <-----------ARR10    <--------HAHB4                        <---------ARR11(3)    --------->ATHB51                      --------->ARR11(3)   --------->ICU4                         <---------ARR14(2)   <---------YAB1                        <---------GLK1(2) ------>ANAC58                   ---------->DOF2                                                   <- ------>ANAC58                 ------>MYB83  <----------DOF2                                    ----- ------>ANAC46                 ------>MYB46(1)                              ---------->DOF2     ----- ---->ZAT6                    ----------->RAV1(1)                  <---------AtLEC2   <----------ID1- -----ALFIN1                --------->MYB46(3)                 --------->GLK1(1) --------->CCA1(2) <-   actccattattacctgcattgtttcatcaaaccaacaaagtgagaatcttttttgttttagacacatttccatgactcaaaagatagaagaacaaaaacc  18895600                                                    --------->MYB46(3)                                                   <------ZmHOX2a(2)                                                  --------->AGP1    <---------GLK1(2)                             <---------ARR14(2)  --------->ICU4                                  <---------ARR11(3)  <---------YAB1                                  --------->ARR14(2) --------ATHB12         <---------ANAC58        ----------->ARR10 ---->TOE2(2)           <---------ANAC58      <--------P                                           -- ---->TOE1(2)<---------ANAC58      ---------->DOF2--------->ARR11(3)                  --------->ANAC46 -------->YAB1      --------->HSFC1(2)  --------->GLK1(2)                             --------->ANAC58 --------YAB1<---------ANAC58 --------->WOX13(1)--------->MYB59                       --------->ANAC58   tatgatgattctcttgcttcgacgtttcttatccatcaaaagcttctggttagatccaccatgtctaaaatcaaacatgctcataaacacccaaacacat  18895700                                                              <---------ALFIN1                                                     ------>ZmHOX2a(1)                                                     ------------>CBF                                                 <---------ARR14(2)                         <---------HSFB2a(2)     --------->ARR14(2)                         --------->HSFB2a(2)     --------->ARR11(3)                 --------->ARR11(3)          <---------AHL20(2)             ---------->DOF2                 --------->AHL20(2)------>ZmHOX2a(1)            <-------- ---->ZmHOX2a(1) <---------ARR11(3)<----------DOF2  --------->TOE2(3)<<<<<<<<<TBF1  <---------MYB52(1)   cctagcccttctcttgaaagatgtcttctacaaatctctttctccatttaaaatcctcaatgctcctcttcttcttctctctctctgttaactccttttg  18895800                   ----------->GT1                 ---------->DOF2                                                                    <                 <---------ZAT14                                                                <----              ----------->GT1                                                                 <------   --------->ARR11(3)                       <---------YAB1                                  ---------   --------->GLK1(2)            <---------ARR14(2)                                       <-----------GT1   <---------ARR11(3)   ---------->DOF2   ----------->GT1   --------->GLK1(2)       <---------MYB52(1) --DOF2   ---------->DOF2       --------->ARR14(2)     ---------->DOF2            <-----------RAV1(1)   agcaaaatctacaaaagagtaaagtataaagacagataccaaaactgtgattacaaacaaagaatatgaagactgactcacaaactgttgtttactatat  18895900                                  ---------->DOF2                       ------>ZmHOX2a(2)      ------                         --------->LBD16                                ------------>CBF       ------                        --------->ANAC58                         --------->GLK1(2)             <-----                        --------->ANAC46                         --------->ARR14(2)            <-----        XXXXXXXXXXXXXXXXXXXX>MIR863-5P                           <-----------ARR10         <------ZmHOX2a(1)       --------->AtLEC2 --------->ANAC58                         <---------ARR14(2)       -----------    <-------TEIL       --------->LBD16                          <---------GLK1(2)        ----------->GT1 ---------YAB1         <---------LBD16  ---------->DOF2      --------->YAB1       ----------------->AGL1 -----AHL20(2)        <---------ALFIN1 --------->CCA1(2)--------->TOE2(3)     <---------ANAC58 <----- -----TBP <------------CBF  ---------->DOF2          <-----------GT1    ==========================HOX2a_HOX2a ------>AGL15      ------>ZmHOX2a(2)  --------->ARR11(3)--------->TOE1(3)     <---------ANAC58 ------   atatgattcatgcattgttgatccccacggaaaagaaaaagataaaggcataaatataccttataagaatctgatccaatgcttgcaagaacaggaaaat  18896000  --------->YAB1 <---------ZAT6                <---------ZAT6 --->ARR14(2)            <---------------AtSPL8 --->ARR11(3)            <---------------AtSPL3 ----ARR14(2)       ---------->DOF2  <-----------GT1                        ---------->DOF2       <-- ----ARR11(3)   <-------TEIL   ----------->GT1                 >>>>>>>>>>>>>>>>>LFY      ---------->DOF2 >GT1--------->AHL20(2) ---------->DOF2 <----------DOF2       --------->RAP2.6(2)    --------->TOE2(3) ------ARR10 <---------At4g35610   --------->YAB1           <---------At4g35610      --------->TOE1(3) --->GLK1(2) --------->At4g35610--------->YAB1  --------->ANAC46         <---------TOE2(3)       <---   ctactgataaaatgcagatgcaaaaagaaagtactgataatactttacacactcagtgtttcagcctccattgttaagaaaagaaaaccttaaaagtatt  18896100        <---------ARR11(3)        <---------ARR14(2)                    <---------YAB1        --------->ARR11(3)                    <---------AHL20(2)        --------->ARR14(2)                   <---------AHL20(1)        <-----------ARR10                    --------->AHL20(1)        <---------GLK1(2)                    <---------AHL20(2)      --------->LBD16                        --------->AHL20(2)     <---------HSFB2a(2)                    --------->YAB1     --------->HSFB2a(2)  <------NtERF2   --------->AHL20(2)                                 <-------  <-----------GT1       <---------RAP2.6(2)<---------YAB1                                 <--------P -------YAB1           <---------LBD16    <---------AHL20(2)                         <-------PIF5 ------AHL20(2)   --------->AHL20(2)    <---------YAB1           ----------->GT1     ------->PIF5   tttatttccagattttcgcataaaatgcggcattcttcgcttattaatataatagaaaaatcacgagaggtgaagaagctcgaagcacgagggtagatgt  18896200  Previous    Next  AGI:  At2g45900.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G61380.1); similar to {, related [Medicago truncatula] (GB:ABD32828.1); contains domain PTHR21726:SF4 (PTHR21726:SF4); contains domain PTHR21726 (PTHR21726) Range:  from: 18893142    to: 18895747    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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