Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <---------AHL20(2)                                      <---------ANAC46                                      <---------ANAC58                                      <---------ANAC58                                      --------->ANAC55(2)                        <----------DOF2                                     <-------TEIL                              ------>MYB46(1)    ----------->GT1                <-------MYC3                                ------>MYB83 ----->HSFB2a(2)                   ------->MYC3            ---------->DOF2   <---------MYB59 ------HSFB2a(2)                   ------->MYC2       ----------->GT1---------->DOF2 --->At4g35610                     <-------MYC2   ---------->DOF2   <---------AHL20(2)             <-   tgcaaatcgaaaaaattccaagttttgttgagaaacacatgcgtattgaattgaaagcgtttaaagagatttaaagaaacctactttggagattgtactc  18882600                                                                            <---------ANAC58                                                                        --------->CCA1(2)                                                        <-----------GT1<---------ARR14(2)                                             <---------ANAC58          --------->ARR14(2)       <----------DOF2                       <---------ANAC58     ------>MYB46(1)         --------->TOE1(3)  <---------At4g35610                      <-----------GT1        ------>MYB83            --------->TOE2(3) --------At4g35610           <<<<<<<<<TBF1<-----------GT1   *TSS  -------->P<---------ANAC58   gtgctgcttctttctcttggctaaattgttcttcttcgacattttttccgttccaatttcacctctccaaccagataggcgttctctataaaccctaaat  18882700                  <---------ANAC55(2)                  --------->ANAC58                  --------->ANAC58                  --------->ANAC55(2)                  --------->ANAC46                 --------->SPL7               <---------SPL7             <---------------AtSPL3             <---------------AtSPL8          ---------->DOF2       --------------->AGL15       --------->TOE2(3)       <---------------AGL15      ----------------->AGL1      <-----------------AGL1   ------->GAMYB <-------TEIL   ----------->HVH21  <---------MYB52(2) ----------->RAV1(2)            --------->At4g35610 --------->At4g35610    --------->TOE2(3) <---------At4g35610    <----------DOF2--------->CCA1(2)                                    ---------   ttcaactgacctcaaagggtacggaactttaatgggctgagataagacataagcccatttagaagatagaatagaagtttcagtataagcccatttaagc  18882800                                                                 --------->bZIP60(2)                                                         <----------DOF2                                                        <---------DAG2                                                     ------->GAMYB                                                    <---------MYB111(2)                                                    <---------MYB52(2)                                                    <---------MYB55(2)                                                    <---------MYB111(1)                                            <---------MYB46(3)   --------->ANAC58                                          <---------MYB52(1)     --------->ANAC46                                 --------->ZAT18    <---------MYB46(2)      ---------->ID1                                 <---------ZAT14    --------->MYB46(3)<---------ALFIN1     <---------ZAT18    ---------->DOF2              <---------ZAT18    <------------MYB.PH3(2) <---------CCA1(2) ->DOF2                     --------->ETT(2)--------->MYB52(2)   --------->ANAC58 <----------DOF2 ---   ccagataaaagcttagaaaccgaaacgttgtcgagcgcacaactgttcgttccaactacctttctccaagtcacacttgtctctctttacttatgcactc  18882900                     <-----------RAV1(1)                    <---------YAB1                   <------------CBF                 <---------YAB1           <-------MYC2           <-------MYC3           ------->MYC2           ------->MYC3                                                                    --------->LBD16        <---------ANAC58                                                                   ------>NtERF2        <---------ANAC58                <<<<<<<<<TBF1                                  <-----------GT1        <---------AtLEC2             <<<<<<<<<TBF1                      --------->TOE1(3) --------->ANAC46   <---------ICU4--------->ICU4     --------------------->WRI1      *TSS--------->TOE2(3)<---------LBD16  --------->ICU4xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)         --------->AtMYB61   --------->TOE2(3) --------->CBF  <----------DOF2<---------At4g35610 <---------ATERF1(1) --------->ZAT6 <-----------GT1   tgcaatttttgcatgtgtctttattgttgtctctgcttcttcttcttcatcgtcgtctccaccaaaatccctaaccctaaacctcgattttcccgcccaa  18883000                                                                                        <---------GLK1(1)                                                                                        --------->ZAT2                                                                                        --------->At4g35610                                                                                  ------>NtERF2                                             ------>MYB46(1)                      <-----------HVH21                                             ------>MYB83                         --------->LBD16                                           --------->AtMYB61                     --------->ANAC46                                         -------->P                          <---------HSFC1(2)                                         ------>MYB83                        <---------HSFB2a(1)                     <----------DOF2     ------>MYB46(1)                     --------->HSFB2a(1)                  ------>MYB46(1)       --------->MYB55(1)                  <-----------ARR10                  ------>MYB83         <---------MYB111(1)                  --------->ARR14(2)                <---------MYB59        <---------MYB46(2)                   ---------->TaMYB80           <---------ATHB12            <---------MYB59                     <---------ARR14(2)         --------->WOX13(1)            <---------MYB111(2)                 <---------GLK1(2)        <---------WRKY38(1)            --------->MYB46(3)                --------->LBD16<---------At4g35610        <---------WRKY12            <-----------GT1                    <---------LBD16  <---------ZAT2       --------->WRKY18(1)        <----------DOF2            <---------YAB1--------->ARR14(2)   -----     --------->WOX13(1)           <---------DAG2 ------>ZmHOX2a(1)--------->KAN4(2)     --------->GLK1(1)  ------->TEIL------->TEIL     <-----------GT1   <----------DOF2 --------->YAB1 <---------LBD16 <----   aatgtatcagtcaatgaacctatctttttcttctaactttaccaacctatcctttctcaaaccacgattatactccggaatctccgccagagctcccaaa  18883100                                        <------NtERF2                                       ------>NtERF2                                      <---------TCP20                                      --------->PCF2                                    --------->LBD16                                    <---------ATERF1(1)                                    ------>NtERF2                                   --------->DEAR3(1)                                  <---------LBD16                                 ------>ZmHOX2a(1)                             <---------ARR14(2)        <-----------GT1                         <-----                             --------->ARR14(2)     --------->ARR14(2)                         ------                          <---------ANAC58     --------->TOE1(2)    ---------->DOF2       --------->At4g35610                          <---------ANAC58  --------->ARR14(2)    --------->HSFB2a(2)     <---------At4g35610   --------->REM1(1)    ------>ZmHOX2a(1)   <---------ARR14(2)    --------->LBD16  --------->At4g35610 ---->ARR14(2)        ----------->RAV1(2)<---------ALFIN1         <---------HSFB2a(2)  ---------->DOF2 -----ARR14(2)      ------>ZmHOX2a(1)------>NtERF2  <---------ARR14(2)          <---------At4g35610   tccctacatttcaaattcaatccttcctgcgtctcctccggccccaaatccgacgattcacctctatccgagaagctcatttcgctgcttaaagctgtcc  18883200                                                   --------->ZAT14                                                   <---------REM1(2)                                                   <---------ZAT14                                             ------>ZmHOX2a(2)                                            <------ZmHOX2a(2)                                           --------->ARR11(3)                                      <-        --------->MYB52(1)            <---------ARR14(2)                                           <-       ----------->HVH21              --------->ARR14(2)                          <---------ARR11(3)       <---------SPL7             <---------At4g35610                             --------->ARR11(3)-       ----------->TGA1           --------->At4g35610                          <---------GLK1(2)  --- ------------AGL1       --------->CCA1(2)  <---------ARR11(3)       <-----------HVH21    --------->ANAC46 ----------->AGL1---------->DOF2 ----------->RAV1(1)              --------->MYB59--------->At4g35610<   caaactggtctgacggtatcaaagagagacggatgcagcagaaacgatctctctacactcacgagaattgggtcagacacagaagctctcttcgccatct  18883300          ------>ZmHOX2a(1)      <---------ARR14(2)      --------->ARR14(2)      ------->TEIL                                                                         <---------     <---------CCA1(2)                                                                   <------NtERF2   --------->ANAC55(1)                                                                  ------>NtERF2   <---------ANAC55(2)                                                                  --------->LBD16   --------->ANAC55(2)                                                                 --------->ATERF1(2)   ===============================================bZIP_DOF                             <---------ATERF1(2)   --------->ANAC58                                                             ------>ZmHOX2a(1)   -   <---------O2                                                                 <---------YAB1      -   <---------TGA1a                                                           <------ZmHOX2a(2)     --   --------->O2                                                             <---------ARR14(2)     --   --------->TGA1a                                                    <-----------HVH21<---------DEAR3(1)   --------->ANAC58                                                  --------->DEAR3(1)--------->DEAR3(1) ----------TGA1                 <-----------GT1                   --------->AtMYB61   --------->DEAR4(2) ----------HVH21           <<<<<<<<CAMTA3                         --------->DEAR3(1)  <---------LBD16 ---------->HVH21        --------->ANAC46       --------->LBD16   <---------ALFIN1    --------->ATERF1(1) ------>ANAC46           --------->ANAC55(2)    ------>NtERF2    --------->MYB46(3) ------>ZmHOX2a(2) ---------MYB52(1)    <---------REM1(2)<----------DOF2     <<<<<<<<<TBF1    --------->ARR14(2)    <--   ccgtcacgtatcctcgagcccatcttcacgcgttatactgtctttgattccgcctgttttcttcttcaccaccgtcgcgatcctgatcgccggctataac  18883400                                                                             ------>NtERF2                                                                             --------->LBD16                                                                           <---------LBD16                                                                           <------NtERF2                                                                           --------->ATERF1(1)                                                                          ------>NtERF2                                                                          <---------ATERF1(1)       --------->ARR14(2)                                                <---------ARR14(2)   --------->LBD16                  --------->ZAT14                  --------->SPL7  --------->DEAR3(1)             <---------ANAC46                   --------->MYB52(1)  <---------ANAC46           <---------ANAC58                      <---------SPL7 -DOF2 <---------ARR14(2) --------->GLK1(1)                      <---------At4g35610 ----->NtERF2        <---------ANAC58                            --------->ZAT2 -------->LBD16      <---------ANAC58                        <---------ARR14(2) ------->ANAC46      <---------ANAC46 ------->TEIL           --------->ARR14(2) <----------DOF2  <--- ------->DEAR3(1) <--------P <---------ANAC58 <---------GLK1(2)  --------->At4g35610     <---------At4g35610 -------LBD16   <---------MYB46(3)  <---------ZAT14  ------>ZmHOX2a(1)   --------->ARR14(2)<---------   tccgccgtggatttggactggttgcctgatttcttccctgtacttcgagcttctcctctaccgtatcagcttacggctccggctttagctctgcttctag  18883500  Previous    Next  AGI:  At2g45860.1    Description:  unknown protein Range:  from: 18881834    to: 18882660    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g45870.1    Description:  Identical to UPF0187 protein At2g45870, chloroplast precursor [Arabidopsis Thaliana] (GB:O80832); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G61320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39584.1); contains InterPro domain Protein of unknown function UPF0187 (InterPro:IPR007913) Range:  from: 18882968    to: 18884551    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version