Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 ----------->RAV1(1)                            --------->ANAC46                          <-----------GT1                                                      ------                     <---------AHL20(2)                                                       <------                     <---------AHL20(1)                                                <---------ICU4                   <---------YAB1                                                      --------->YAB1                <---------YAB1 <---------ALFIN1                                        <--------HAHB4                <---------AHL20(2)                                                     --------->ATHB12               <---------AHL20(1)                                                     <---------ATHB12               --------->YAB1 --------->ANAC46          --------->YAB1              --------->WOX13(1)               --------->AHL20(2)                 --------->ZAT6                <---------ARR14(2) --          <-------TEIL<---------YAB1     --------->At4g35610               --------->ANAC46 <--------   ctactaagaagattcaatattattatttttaccccacataagcttctgactaacactatcgaaatcaaattgaatccaagcgaattcaatcatttcacca  18882300       -------->P <---------AHL20(2)       ------>MYB46(1)     --------------->AGL15     ------->GAMYB--------->ARR11(3)    --------->MYB46(3)   --------->ANAC58                                     <---------MYB52(1)       ------->TEIL   --------->ANAC58                                --------->ARR14(2)          <<<<<<<<<EIN3 --->ATHB12       --------->AHL20(1)               --------->GLK1(2) ------->GAMYB ---YAB1    ----------->GT1                       <---------GLK1(2) <---------MYB52(2) ------->YAB1     <---------AHL20(1)            ------->GAMYB       --------->MYB46(3) ---GT1------>MYB83          ---------->DOF2 ----------->RAV1(1)  --------->MYB52(1)            -----   ttggtaaccaactagagtaatatatagctagaaaagaccattctctgcaacagaatcggtttgctacttaacgaacaccaatgtatatgaactaaatatc  18882400                                                                      ------>ZmHOX2a(2)                                                                    --------->ARR11(3)                                                                    <---------ARR11(3)           ----                                  <----------DOF2           <---------HSFC1(2)                 ------         --------->CCA1(2)    ------>ZmHOX2a(1)             --------->HSFC1(2)          <----------DOF2       --------->CCA1(2)--------->DAG2                <---------AtLEC2=================HOX2a_HOX2a ---->YAB1            ---------->DOF2       <---------YAB1 ------->TEIL         ------>ZmHOX2a(1)<---   agaattaagagataagagagacagaaaaggtccttactttcatcttattcttgttggcatgaagcttcttgatcttcttgtcctgtaactctttctcttc  18882500                                            <---------AHL20(2)                                      <---------ANAC58                                      <---------ANAC46                                      --------->ANAC55(2)                                      <---------ANAC58                           <----------DOF2                                     <-------TEIL                              ------>MYB46(1)    ----------->GT1                ------->MYC3                                ------>MYB83 ----->HSFB2a(2)                   <-------MYC3            ---------->DOF2   <---------MYB59 --->At4g35610                     <-------MYC2       ----------->GT1---------->DOF2 ------HSFB2a(2)                   ------->MYC2   ---------->DOF2   <---------AHL20(2)             <-   tgcaaatcgaaaaaattccaagttttgttgagaaacacatgcgtattgaattgaaagcgtttaaagagatttaaagaaacctactttggagattgtactc  18882600                                                                            <---------ANAC58                                                                        --------->CCA1(2)                                                        <-----------GT1--------->ARR14(2)                                             <---------ANAC58          <---------ARR14(2)       <----------DOF2                       <---------ANAC58     ------>MYB83            --------->TOE1(3)  <---------At4g35610                      <-----------GT1        -------->P<---------ANAC58 --------At4g35610           <<<<<<<<<TBF1<-----------GT1   *TSS  ------>MYB46(1)         --------->TOE2(3)   gtgctgcttctttctcttggctaaattgttcttcttcgacattttttccgttccaatttcacctctccaaccagataggcgttctctataaaccctaaat  18882700                  <---------ANAC55(2)                  --------->ANAC55(2)                  --------->ANAC58                  --------->ANAC58                  --------->ANAC46                 <-------TEIL               <---------SPL7             <---------------AtSPL8             <---------------AtSPL3          ---------->DOF2       <---------------AGL15       --------->TOE2(3)       --------------->AGL15      ----------------->AGL1      <-----------------AGL1   ------->GAMYB --------->SPL7   ----------->HVH21  <---------MYB52(2) <---------At4g35610            --------->At4g35610 --------->At4g35610    <----------DOF2--------->CCA1(2) ----------->RAV1(2)    --------->TOE2(3)                                                   ---------   ttcaactgacctcaaagggtacggaactttaatgggctgagataagacataagcccatttagaagatagaatagaagtttcagtataagcccatttaagc  18882800                                                                 --------->ANAC58                                                         <----------DOF2                                                        <---------DAG2                                                     ------->GAMYB                                                    <---------MYB111(1)                                                    <------------MYB.PH3(2)                                                    <---------MYB52(2)                                                    <---------MYB111(2)                                            --------->MYB52(2)   --------->ANAC58                                          <---------MYB52(1)     --------->bZIP60(2)                                 <---------ZAT18    <---------MYB55(2)      <---------CCA1(2)                                 <---------ZAT14    --------->MYB46(3)      ---------->ID1    ---------->DOF2              --------->ZAT18    <---------MYB46(2)<---------ALFIN1     <---------ZAT18 ->DOF2                     --------->ETT(2)<---------MYB46(3)   --------->ANAC46 <----------DOF2 ---   ccagataaaagcttagaaaccgaaacgttgtcgagcgcacaactgttcgttccaactacctttctccaagtcacacttgtctctctttacttatgcactc  18882900                     <-----------RAV1(1)                    <---------YAB1                   <------------CBF                 --------->ICU4           <-------MYC3           <-------MYC2           ------->MYC2           ------->MYC3                                                                    --------->LBD16        <---------ANAC58                                                                   ------>NtERF2        <---------ANAC58                <<<<<<<<<TBF1                                  <-----------GT1        <---------AtLEC2             <<<<<<<<<TBF1                      --------->TOE2(3) --------->ANAC46   <---------ICU4<---------YAB1     --------------------->WRI1      *TSS--------->TOE1(3)<---------LBD16  --------->ICU4xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)         --------->AtMYB61   --------->TOE2(3) --------->CBF  <----------DOF2<---------At4g35610 <---------ATERF1(1) --------->ZAT6 <-----------GT1   tgcaatttttgcatgtgtctttattgttgtctctgcttcttcttcttcatcgtcgtctccaccaaaatccctaaccctaaacctcgattttcccgcccaa  18883000                                                                                        --------->GLK1(1)                                                                                        <---------GLK1(1)                                                                                        --------->ZAT2                                                                                  <-----------HVH21                                             ------>MYB46(1)                      --------->LBD16                                             ------>MYB83                         ------>NtERF2                                           --------->AtMYB61                     --------->ANAC46                                         ------>MYB46(1)                     --------->HSFB2a(1)                                         -------->P                          <---------HSFC1(2)                     <----------DOF2     ------>MYB83                        <---------HSFB2a(1)                  ------>MYB83          --------->MYB55(1)                  --------->ARR14(2)                  ------>MYB46(1)      <---------MYB59                      ---------->TaMYB80                <---------MYB59        <---------MYB46(2)                   <-----------ARR10           <---------ATHB12            <---------MYB111(2)                 <---------ARR14(2)         --------->WOX13(1)            --------->MYB46(3)                  <---------GLK1(2)        <---------WRKY38(1)            <---------MYB111(1)               --------->LBD16<---------At4g35610        <---------WRKY12            <-----------GT1                    <---------LBD16  --------->At4g35610       --------->WRKY18(1)        <---------DAG2             <---------YAB1--------->ARR14(2)   <----     --------->WOX13(1)           <----------DOF2------>ZmHOX2a(1)--------->KAN4(2)     <---------ZAT2  ------->TEIL------->TEIL     <-----------GT1   <----------DOF2 --------->YAB1 <---------LBD16 -----   aatgtatcagtcaatgaacctatctttttcttctaactttaccaacctatcctttctcaaaccacgattatactccggaatctccgccagagctcccaaa  18883100                                        <------NtERF2                                       ------>NtERF2                                      <---------TCP20                                      --------->PCF2                                    --------->LBD16                                    ------>NtERF2                                    <---------ATERF1(1)                                   --------->DEAR3(1)                                  <---------LBD16                                 ------>ZmHOX2a(1)                             <---------ARR14(2)        <-----------GT1                         <-----                             --------->ARR14(2)     --------->ARR14(2)                         ------                          <---------ANAC58     --------->TOE1(2)    ---------->DOF2       --------->At4g35610                          <---------ANAC58  --------->ARR14(2)    --------->LBD16  --------->At4g35610   --------->REM1(1)    ------>ZmHOX2a(1)   <---------ARR14(2)    <---------HSFB2a(2)     <---------At4g35610 -----ARR14(2)        ----------->RAV1(2)<---------ALFIN1         --------->HSFB2a(2)  ---------->DOF2 ---->ARR14(2)      ------>ZmHOX2a(1)------>NtERF2  <---------ARR14(2)          <---------At4g35610   tccctacatttcaaattcaatccttcctgcgtctcctccggccccaaatccgacgattcacctctatccgagaagctcatttcgctgcttaaagctgtcc  18883200  Previous    Next  AGI:  At2g45860.1    Description:  unknown protein Range:  from: 18881834    to: 18882660    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g45870.1    Description:  Identical to UPF0187 protein At2g45870, chloroplast precursor [Arabidopsis Thaliana] (GB:O80832); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G61320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39584.1); contains InterPro domain Protein of unknown function UPF0187 (InterPro:IPR007913) Range:  from: 18882968    to: 18884551    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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