Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->TOE2(3)  --------->KAN4(2)                                                           --------->ZAT18 <----------TaMYB80                                                           <---------ZAT14 ------>LBD16                                                                 --------->ZAT14 -----LBD16            <------ZmHOX2a(2)                             <----------DOF2       --------->TOE1(3) -->HVH21     <---------CCA1(2)                   >>>>>>>>>TBF1      <---------DAG2----------->GT1  < >RAV1(2)    ------->TEIL             <---------YAB1         <----------DOF2  <---------ZAT18   -----   cggataatcccattgcatctcttcgatccatttcgcatttacaatagttgaagaagaaagactcttttcaactttttaagtgaacttgtgaaaccctaaa  18880600                         ----------->GT1                <---------YAB1              <---------ICU4             <------ZmHOX2a(1)    --------->MYB52(1)                  ---              --------->YAB1       ---------->DOF2       <------ZmHOX2a(1)                       <--- ---------GLK1(2)   <------ZmHOX2a(1)   ----------->GT1 ----------->GT1              <----------DOF2 ----->DOF2  --------->ICU4    ---------->DOF2          <----------ID1   <---------TOE2(3)       ----   aagattgtggctagaattatgaggagagagagaaaaagaaagaggataaatggataagaggaaaaaacagaatcaaaggttgagagactttacgatgaag  18880700                                                                                                    -                                                                                                 ----                                                                                                 ----                         ---------->DOF2                        ------>ZmHOX2a(1)            --------             ---------->DOF2                        <-----------GT1                         <-------- ------>CCA1(2)       --------->AtLEC2        <---------At4g35610       <----------DOF2   --------->ANAC58 ------ARR11(3)       --------->ANAC58   ----------------------->TaNAC69(2)               --------->ANAC46 ----->ARR11(3)       --------->ANAC58 <----------DOF2       ------>ZmHOX2a(1)            --------->ANAC58   atataaacttggagagaaaggaacatgcaaagctctaaacactttctctgcttcttacttctcctcctctctctctttcattctttcaccataagcaaca  18880800                                                                                                  <--     ---------->DOF2                                                                             <--- --------->DOF2                                                                       <----------DOF2 ----->ANAC58                                                                         <---------DAG2 ----->ANAC58                      <------ZmHOX2a(1)                                 <---------ANAC58 --->RAV1(1)                     --------->MYB59                                     <---------ANAC58 --ID1    <----------DOF2    <---------MYB46(3)<---------TOE2(3)      <------------------------ANAC81   agaaaagaaaagctttctcttctatcaacaatggttaggacttggttttgaggctatctctctctctctctcttcttgaatttgtttgctttttagtttt  18880900                                                                                               ------                                                                                               <-----                                                                                            <--------                                                                                          <------ZmHOX2a(2)                                                                                         --------->ARR11(3)                                                                                         <---------ARR11(3)                                                                    <---------ZAT6       --------->ARR14(2)         ------------------------>ANAC81  <---------GLK1(2)       <---------At5g28300    <---------ARR14(2)  ----------->HVH21                 ----------->HVH21    ---------->DOF2        <<<<<<<<<<<<<<<<<LFY <-----------HVH21               --------->TOE2(3)   --------->ANAC58     ========================HOX2a_HOX2a -------HSFB2a(2)     XXXXXXXXXXXXXXXXXXXX>MIR837-3P --------->ANAC46     <------ZmHOX2a(1)------>ZmHOX2a(2) ------LBD16         <---------MYB52(2) ------->GAMYB--------->ANAC58     =======================HOX2a_HOX2a   ctgggtgacagaaggaaacagaaacaaacaaaaaacctctaacagactctctctcaagcaaaagcatttactgtgaggataacaacaatgggatctttta  18881000                                                                                                 <---                                                                  <---------------AGL15          ----                                                                  --------------->AGL15         <---- <----------DOF2                              *TSS               ----------------->AGL2         ----- --->AHL20(2)                            <---------ATHB12        <-----------------AGL3  <---------AtLEC2 ----AHL20(2)                         ------>ZmHOX2a(1) --------->WRKY38(1)          <---------At4g35610 --DOF2            ------->TEIL   <---------ARR11(3)  <----------DOF2                --------->At4g35610   attcttttttttctgaaaatgtatttggaaattcaaaatcctaatgaataaactgactttgactgtagctctatatagcaactaggcatctgtatggcac  18881100                                       ------>MYB83                                       ------>MYB46(1)                                       -------->P                                      ----------->RAV1(1)                                 <---------ZAT14                                 <---------ZAT18                               <-------MYC2                               ------->MYC2                               ------->PIF5                               <-------MYC3                               <-------PIF4                               <-------PIF5                               ------->PIF4                               ------->MYC3                              <---------ANAC58                              <------NtERF2                              <---------ANAC58                              <---------ANAC46                            <---------ANAC58                            <---------ANAC46                            <---------ANAC58 <-----------GT1          <---------ARR11(3)           <- ----MYC3               ==========================RAV                 --------->ARR11(3)           <- --->MYC3    <---------ALFIN1------>NtERF2--------->bZIP60(2)        <---------GLK1(1)      <-------- -----At4g35610         <-----------RAV1(2)<-----------HVH21   -------->P           <---------GLK1(2) ---->At4g35610   <----------DOF2--------->ZAT18     <----------DOF2 --------->GLK1(1)   ------>ZmHOX2a(1)   atgactcttatggccacactctttattcaggcgcgtgcaccaacatgtcactcttctttcttctcaaccagaaatcttggtgaacagattcctccttttc  18881200                                                                               --------->GLK1(2)                                                                               --------->ARR14(2)                                                                               <---------ARR14(2)                                                      <---------LBD16         <---------GLK1(2)                                                  ------>ZmHOX2a(2)     --------->ANAC58                                                <---------ARR11(3)      --------->ANAC58 --------At4g35610                              --------->ARR11(3)------>ZmHOX2a(2)               --- --------ZAT2                                <---------WOX13(1)  <---------At4g35610          ------- --DOF2       <-----------GT1              --------->ATHB12      --------->At4g35610         --------   aagctgatgctacttcttactagtctctctactgtttctatagactgattgatctcttcggaatttgatctgagacggaagaatctgtagagacagtgga  18881300        --------->LBD16       <---------ANAC46       --------->DEAR3(1)      <------NtERF2      --------->ATERF1(1)      <---------LBD16     ------>NtERF2    --------->ANAC46   ------->MYC3   <-------MYC2   ------->MYC2   ------->PIF5   <-------PIF5                                                  <----------DOF2   <-------MYC3                  <-----------HVH21            --------------->AGL15  --------->ANAC58            <---------ANAC58               ----------------->AGL3  --------->TGA1a             <---------ANAC58               ----------------->AGL1  --------->ANAC58      --------->CCA1(2)                 <---------ANAC58  <---------ALFIN1     --------->ARR11(1)           <---------ALFIN1  --------->ANAC46     <---------ARR14(2)          --------->ZAT18  --------->HSFB2a(2) ------>ATERF1(1)      --------->ARR14(2)     <---------ANAC58<---------ALFIN1 -->ZAT14            ----------->ARR10<-----------HVH21   <---------ANAC58 ->ALFIN1<------NtERF2 --------->ARR11(3)     <---------ANAC58<---------------AGL15   ggccacgcgccggagagtgagaaaagatttgggcctgtctggtcagagacttgcccactggcttccactttgagaactattttgacgagagagagaggct  18881400                              --------->PCF2                             <------ZmHOX2a(1)                                      <---------YAB1                           --------->ANAC58                                       --------->YAB1                       --------->ANAC58                                     ---------->ID1                   --------->ARR11(3)                                  <---------RVE1(1)          <--                   <---------ARR11(3)                                  <---------CCA1(1)       ------                  --------->RVE1(1)                                   <---------ARR11(3)     --------                  --------->CCA1(1)                                   --------->ARR11(3)     <-------              --------->AHL20(2)     --------->ATHB12           <----------DOF2------>ZmHOX2a(1)  ---       --------->GLK1(1)   --------->ANAC58               ---------->DOF2  <-----------GT1   --------  --------->At4g35610  --------->ANAC58           <-----------GT1   <---------TOE2(3)<------ZmHOX2a(1)   gatcagaagaaatctataaaatatctcgcaaggacccattgatgggatgatataacctctcaaagcctttgagattttttcctattaggattcaacttta  18881500  Previous    Next  AGI:  At2g45850.1    Description:  DNA-binding family protein. similar to DNA-binding family protein [Arabidopsis thaliana] (TAIR:AT3G61310.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39578.1); contains InterPro domain Protein of unknown function DUF296 (InterPro:IPR005175); contains InterPro domain HMG-I and HMG-Y, DNA-binding (InterPro:IPR000637) Range:  from: 18878553    to: 18881046    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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