Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       ----------->GT1                                                    --------->MYB59                          ------->GAMYB             <---------TOE1(3)                        --------->At4g35610         <---------TOE2(3)                   <---------ARR11(3)                        <---------At4g35610         --------->DAG2                      --------->ARR11(3)                    --------->ANAC58            --------->YAB1                  --------->ARR14(2) ------->GLK1(2)--------->CCA1(2)               <---------ICU4                  <---------ARR14(2) --------ARR11(3)   --------->ANAC46           <---------YAB1                <------MYB83 ------->ARR11(3)   --------->ANAC58           --------->ICU4                <------MYB46(1) ------>RVE1(1)--------->AHL20(1)         ----------->GT1                   --------->MYB59      ---- -->AHL20(2)   --------->ARR11(3)        --------->MYB59             <-----------------AGL3    ------   aaatctatagcattgaatatataggcaactgaaatagttcattttggtaataataaggtaaattaagaacatcaaaatttggtatctgtagatattagaa  18875900                                                                                                -----                      <---------MYB46(3)                                                   --------->AHL20(2)                  --------->MYB111(1)                                                  --------->AHL20(2)                 <--------P                                                        <---------AHL20(2)               <------MYB46(1)                                                  <---------AHL20(2)               <------MYB83---------->DOF2                                     --------->AHL20(2)  --------->AHL20(2)  ----------->GT1         >>>>>>>>>>GT-3b                  <---------AHL20(2)---- ------->GT1  --------->MYB46(2)    --------->YAB1                    <---------AtMYB61--------->YAB1 ---->DOF2    --------->MYB59      ----------->GT1                    <---------YAB1--------->YAB1   agaaaaaaatgtgtgtttggtaagtggttcaaagagaatgaaaataagaaaaatatgtgtttgataaatgtgatggtagaattaaataataaaaaatata  18876000                              <---------YAB1                            --------->YAB1                            <---------ICU4                           --------->ICU4                                            <---------AHL20(2)                           <---------ATHB12                                         <---------AHL20(1)                      --------->ANAC55(1)                                           <---------AHL20(2)                      --------->bZIP60(2)                                      --------->At5g28300                      --------->ANAC46                                --------->MYB52(2)                      --------->O2--------->YAB1         --------->ANAC58    --------->LBD16                      --------->ANAC58                   --------->ANAC58  <---------LBD16         ----------------------->TaNAC69(2)          ----------->RAV1(1)   <-----------RAV1(2)     --   ----------->GT1    --------->ANAC55(2)      <---------ICU4       <---------MYB52(1)            --- ----->DOF2           <---------ANAC55(2)   <------ZmHOX2a(1)       <--------P----------->GT1     --- ----->DAG2           --------->ANAC58  <-------TEIL<----------ID1<---------MYB46(3)--------->AHL20(2)   aagttgagaaaaatggagtttgccacgtaatcactataaacatacaggataatggcaacaagaaatattggttagtttcagggtaattaatttcgcagag  18876100                               <---------ANAC58                               <---------ANAC58                               <---------ANAC46                            <--------P                           <-------GAMYB                           <---------ANAC58                          <------MYB46(1)                  <---------YAB1     --------->ARR14(2) --------->YAB1            <-----------GT1<---------ANAC58        --------->MYB46(3)               ------>ZmHOX2a(1) ------------->AGL15      <------MYB83            -------->P<-----------GT1 <---------AHL20(2) -------------->AGL3    --------->ALFIN1        --------->MYB46(3) <-----------GT1 --------->TOE2(3) -------------->AGL2---------->DOF2  <---------ARR14(2)--------->AHL20(2)  --------->AHL20(2)--------   tccatatatagttttaacttattaaagtgggttgcttcggttctgaagaaacaaccattaattatctattttcttcataaaatttcctcagaaaacatgg  18876200                                            --------->ARR14(2)                                            --------->ARR11(3)                                            <---------ARR14(2)         ----------->RAV1(1)           ------------>CBF               <-----------TGA1       --------->MYB46(3)             ------->TEIL                    <-----------HVH21           <--  <---------ALFIN1                 <---------ATHB12      <----------DOF2                      <------ <---------REM1(2)            <-------TEIL  <---------ARR11(3)     <---------At5g28300     ------>ZmHOX2a(1) ->TOE2(2)                   --------->CCA1(2)         ------>ZmHOX2a(1)                 ------>ZmHOX2a(2)   gtctacacatccaacatactacaattcttagatacaaatgaatcaatatctgtaatcctcttttccttctaccgtcacaaaactaatgtgatcctcttat  18876300                                                                            <---------YAB1                                                                         <---------MYB46(3)                                                                        <--------P                                                                        <---------WOX13(1)                                                                     --------->ALFIN1                                                                    ------->PIF5                                                                    ------->MYC2                                                                    ------->MYC3                                                                    <-------MYC2                                                                    <-------MYC3                                                                   --------->TGA1a                                                                   <---------TGA1a                                                                   <---------ANAC46                                                                   <---------bZIP60(2)                                                                   =========================bZIP_DOF                                              --------->ANAC55(1)  ============MYC_MYB                                              --------->ANAC55(2)  ==============MYC_MYB    ------>MYB83                                              <---------ANAC55(2)  <---------O2     --------->ANAC58                                              --------->ANAC46     --------->O2<---------YAB1  <-----                                   *TSS --------->AHL20(2)         <---------ANAC55(2)      ------>MYB46(1)                               <---------TOE2(2)    <---------ARR11(3) <-------GAMYB--------->ANAC58                               <---------TOE2(3)    --------->ARR11(3)<---------MYB46(3)  <---------MYB59 --------DOF2                  <---------TOE1(2)   --------->CCA1(1)<-------PIF5 ---------->DOF2 ---CCA1(2)        <---------AHL20(2)   <---------AHL20(2)         --------->ANAC55(2)    --------->TOE2(3)   ctttctctctctctcgttcatttttttttgtcttaggttgaattaaacacataatatctatgagttctcacgtggttgatgatcaaaggcaacctaataa  18876400                             ------>MYB46(1)                             --------->ANAC46                             --------->ANAC58                             --------->ANAC58      --------->YAB1                             ------>MYB83    ------->GAMYB                          --------->MYB46(3) --------->YAB1            <<<<<<<<<TBF1                         -------->P   <------ZmHOX2a(2)   <----------DOF2                          <-                        --------->MYB52(1)   --------->TOE2(3)      <<<<<<<<<TBF1          <---------At4g35610 ------GT1            <---------MYB52(2)    --------->MYB46(3)---------->ID1       ------>ZmHOX2a(1)   ctcaatctcgagtttaagttctaaactaaccaagccatggatcacaaccacaatcttcatctttgtcttcttcttcttcatcatcctcgttggagcttct  18876500                                          <---------ICU4                                      <---------AHL20(2)                                      <---------ICU4                                      -------->HAHB4                                --------->ANAC46              ----------->GT1   --------->YAB1    <---------MYB46(3)          --------->ANAC55(2)   --------->ALFIN1      <---------ARR11(3) <---------ZAT2    <---------ARR11(3)--------->ICU4 --------->At4g35610    <---------CCA1(2) --------->YAB1 --------->ZAT2    --------->ARR11(3)<---------YAB1 ----------RAV1(2)<---------CCA1(2)<---------ICU4                      <---------GLK1(1)  <----------DOF2   ctcaggtggatggacatggtatatctatatctatacataattattcattacaatctattagtaactcaaatgggtttccctcaaaaattgttctttctta  18876600                                                           ------->GAMYB                                                          --------->ANAC46                                                          --------->ANAC58                                                         ------>MYB46(1)                                                         ------>MYB83   --------->ANAC58      -------                                               --------->ANAC58     --------->ANAC46          <------                                               --------->ANAC46--------->MYB46(3)      --------->REM1(1)                          ---------->DOF2  <-----------GT1--------->ANAC58             --------->ANAC46                <---------AtMYB61<---------bZIP60(1)   --------->DEAR3(1)             <---------ZAT14             --------->ALFIN1 ----------->HVH21--------->ANAC58<---------MYB52(2)     --------->ZAT14      <---------AHL20(2) --------->YAB1 <---------ICU4 --------->AtMYB61--------->ANAC58    ---------   catagtttttaatcggtggaggtagaatcaaagtgacaccaatatttacaagaaacaccaacgcaactatccccaaggaaaaactcactacaccactgaa  18876700                                                ------>ZmHOX2a(1)                                                --------->AtLEC2                                              <---------ANAC58                                              <---------ANAC46                                         ========================MYC_MYB                                         <---------TGA1a                                         --------->TGA1a                                         --------->ANAC55(2)                                         <---------ANAC58                                         <---------bZIP60(2)                                         <---------O2                                         --------->O2   -------->P                                         <---------ANAC58                                    ===============MYC_MYB  --------->LBD16                                    ------->GAMYB   --------->ANAC58                           <-----                                  --------->ANAC58  --------->ANAC58                           <----- -->ZAT14                         --------->ANAC58  --------->ANAC46--------->YAB1    --------->ANAC58 ---ZAT14                         -------->P  <---------ANAC58      <-----------GT1   --------->ANAC58 >ANAC46     --------->ZAT18      =================MYC_MYB<---------LBD16         <------ZmHOX2a(1)   cttcacattgcaatgctcactagaccagaacatagcaacccagacgtgtcctgcaagcaacccggagaaatcacaacctagtaaggacgagccagagact  18876800  Previous    Next  AGI:  At2g45840.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G61280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39562.1); contains InterPro domain Protein of unknown function DUF821, CAP10-like (InterPro:IPR008539); contains InterPro domain Lipopolysaccharide-modifying protein (InterPro:IPR006598) Range:  from: 18876335    to: 18878635    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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