Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <----------ID1                                        <---------ICU4                                     --------->ATHB51                                     <--------HAHB4                                     -------->HAHB4                                     <--------ATHB1        <-------GAMYB                <---------ICU4       <---------DEAR3(2)           --------->AHL20(2)       ----------->GT1              --------->ICU4       <---------MYB46(3)           <---------ATHB51      <---------DREB2C(2)           <---------YAB1                                 <----------DOF2      --------->ETT(1)            --------->YAB1                           --------->ATHB51     ---------->ID1            --------->TOE2(3)                           --------->ATHB12   <-----------RAV1(1)    <---------AHL20(2)                              --------->ICU4 ------TOE2(3)            --------->AHL20(2)    <---------TOE2(3)         <---------YAB1 --->MYB52(1)         ----------->GT1--------->YAB1             <---------TOE2(3)  ================== ---->DOF2     ---------->DOF2----------->GT1   <---------TOE1(3)        --------->TOE2(3)   aggttttgtcggttaaataaagagcggtttaaatgttaataattaaggccaaggttagagcccatttaggtgaaacattattgggctttaagagtgctat  18846400                                                                   <--------P                                                                   <---------ANAC46                                                                 <---------MYB46(3)                                                               ------->PIF5                                                               <-------MYC4                                                               <-------PIF5                                                               ------->MYC4                                                               ------->MYC2                                                               <-------MYC3                                                               ------->MYC3                                                               <-------MYC2                                                              --------->O2                                                              ==============MYC_MYB                                                              ============MYC_MYB                                                              <---------PIF3(3)                        <-------MYC4                          --------->PIF3(3)                        ------->MYC2                          =======================================                        ------->MYC4                          <---------TGA1a                        <-------MYC2                          <---------O2             ------>ZmHOX2a(1)                        ------->PIF5                          <---------ANAC46        --------->ANAC46                        <-------PIF5                          --------->bZIP60(2)  --------->ARR11(3)                       --------->PIF3(3)                      --------->TGA1a      <---------ARR11(3)                       <---------TGA1a                      <---------ALFIN1 --------->ANAC58    ----                       <---------PIF3(3)                  <----------------PIF3(2) <---------ARR14(2)                       <---------O2                    <---------ANAC58      --------->ANAC58  ------                       --------->TGA1a                 <---------ANAC58     --------->LBD16    <-----                       --------->O2                --------->CCA1(2)    --------->PCF2--------->TOE2(3)          ----------->GT1                         --------->ARR14(2) <------MYB83  --------->ARR14(2)      --------->AHL20(2)------->MYC3              <---------ARR11(3) <------MYB46(1)  --------->TOE1(3)      <---------AHL20(2)<-------MYC3           <---------HSFB2a(2)<-------GAMYB   --------->RVE1(1) ================================bZIP_DOF      ------>ZmHOX2a(1)--------->ALFIN1  --------->CCA1(1)   tgccccaaataaatgtaaaaaatccacgtggaatttcaatcttgttgtcctagatatgtgtgccacgtggttgggacgcgcgaaatatcctcaacttccg  18846500                                       <---------ZAT18                                   --------->ANAC46                                <---------ZAT14                                --------->ZAT18                                <---------REM1(2)                              <---------ZAT18                              --------->ZAT14                             <---------ANAC46                                                      <-                            <---------------AtSPL8                                                <--                           <---------ANAC46                                                       <--      --------->ALFIN1    --------->ALFIN1--------->ANAC46           <---------ANAC46             <-- =======bZIP_DOF    ------>ZmHOX2a(2)--------->ZAT14            --------->MYB52(1)            <------ ------>DOF2       >>>>>>>>>>>>>>>>>LFY--------->ZAT14         <---------WRKY38(1)            <------ --->HSFB2a(2)=============HOX2a_HOX2a <---------ZAT14<---------WRKY38(1)                 --------->CCA1(2) ----HSFB2a(2)<------ZmHOX2a(1) --------->ZAT14---------->DOF2 <---------WRKY12  --------->ATHB12----   aaagcagagtgggagaggatgatccaatgtggtgtacacagtacacataaaaagagtcaacatgatcaacggcttagaatgaaagattgaagagatgagt  18846600            <---------ANAC46         ----------->HVH21       ------>MYB46(1)       ------>MYB83       --------->MYB52(1)     <---------MYB55(2)                                    --------->ARR14(2)     --------->MYB46(3)                                    <---------ARR14(2)    --------->ANAC46                                      <---------CCA1(2)  <---------WRKY18(1)                                --------->ANAC58 ----------->HVH21                                   --------->ANAC58 --------->WRKY45                                ------>MYB83 --------->WRKY12                                ------>MYB46(1)                         <---------ARR11(3) --------->WRKY38(1)                        >>>>>>>>>>WRKY26                             --------->ARR11(3) ------GAMYB--------->O2                    >>>>>>>>>>WRKY43                      ---------->DOF2 -------ANAC58                              >>>>>>>>>>WRKY38                    --------->YAB1 -------ANAC46                           --------->At4g35610                   <---------ATHB12 -------ANAC58                           <---------At4g35610                   <<<<<<<<<ARR2 -------- ---ANAC58  <---------O2       <---------HSFB2a(2) ---------->DOF2        --------->ANAC58   -------- ---ANAC58------->GAMYB       <---------LBD16  <---------MYB59            --------->ANAC46   -------- ----->ZAT18<---------bZIP60(2)--------->HSFB2a(2)<---------ATHB12        --------->ANAC58<------ZmHOX2a(2)   gcgttgacccaacgacgtgttttgtctgtttatcgggaaacgaagatgaccaaacaagccctatctccgattacacacacaatcaaaagaagatcaagcc  18846700                       <---------WOX13(1)                      <------------CBF                    <---------AHL20(2)                    <---------YAB1                   <---------AHL20(2)                   --------->AHL20(2)                  --------->YAB1                                                           <---------YAB1 ->ANAC58    <---------ANAC58                        --------->ANAC46--------->ARR11(3)   *TSS    <-- ->ANAC58    <---------ANAC58                     --------->ZAT14    <---------ARR11(3) <----------DOF2 ->ANAC46<------------CBF                         <---------ZAT18---------->DOF2     --------->GLK1(2)   aaaaacagaggcattgcgaattttaattgatcactctctctctctatctctgttcacacatctctcccaaaggtatttcgaatcgaaattcttttgattt  18846800                                                                                            ---------                                                                                         <---------YAB1                                                                                     <---------ANAC58                        <XXXXXXXXXXXXXXXXXXXXXMIR864-3P                           ------>ZmHOX2a(1)                       <---------ANAC58                                      <---------ANAC58     --------->ATHB12  <---------ANAC58                                      <---------ANAC58    <---------YAB1     <---------ANAC46                              <-----------GT1 <---------ANAC46 --------DOF2<-----------GT1                 <----------DOF2        <-----------GT1  <---------ANAC58   ctttctatgatttgtttacattttttcgtggtgttcttgatttttttctttgatcaaaactagtagaaattttccaatttcgtcctgccttgtgattagt  18846900                        <------MYB46(1)                --------->ATHB12   <---------RVE1(1)    <------MYB83             --------->MYB52(2)   <---------CCA1(1)   --------->MYB59   --------->SPL7  --------->ARR11(3)   --------->MYB46(2)--------->ATERF1(1)  --------->At4g35610  <---------ARR11(3)   --------->MYB111(1)     <---------MYB52(1)                              ------ >ICU4         <---------YAB1       --------->ALFIN1   ------->TEIL--------->ZAT2      ------->TEIL   agtagatattttggaatttgattagtaggtagaagaagatggggacgacgttagatgtatcaagagcagagctagcacttgtggtaatgtatttgaacaa  18847000                                                          --------->ZAT18                                                          <---------ZAT18                                                         <---------ANAC46                                                       <---------MYB46(3)                                                      <---------AtMYB61                                                      --------->ALFIN1                                                    <---------ANAC58                                                    <---------ANAC46                                                    <---------ANAC58                                                   --------->ATHB12                                <- --------->At4g35610                          --------->ARR11(3)   --------->TOE1(1)               <- ---->DOF2--------->CCA1(2)                   <---------ARR11(3)----------->RAV1(2)       --------->ARR14(2)   agcagaggcaagagataagttatgcagagctatacagtatggttccaagttcttgagtggtggacaacctggtactgctcaaaatgttgacaaatctact  18847100                                                                                                 <---                                                                                              -------                                                                                             <-------                                                                                           --------->YAB1                                                                                          <---------YAB1                                                                                        <---------ICU4                             ----------->GT1                                        --------->AHL20(2)                    <---------MYB52(1)                                           <-----------GT1<----         ---------->DOF2    <---------TOE2(3)   --------->ATHB12                --------->AHL20(2)      --------->ANAC58      <---------TOE1(3)  <---------YAB1               --------->AHL20(2)-------      --------->ANAC58<----------DOF2    <---------YAB1                     <---------AHL20(2)<------ --------ANAC58   <---------ANAC58    <----------DOF2                 <----------DOF2  --------->ICU4 --------ANAC58   <---------ANAC58    ------>ZmHOX2a(1)         <-----------GT1 <---------AHL20(2)   agcttagcaagaaaagtcttccgtcttttcaaggttaatccttttgattttgattagagtgtgtttttacctctttgtttaattaactaaatattatcat  18847200                                                                                      <-------TEIL                                                                                   <------MYB46(1)                                                                                   <------MYB83                                                                                  --------->MYB111(2)                                                                                  --------->MYB59                                                                                  <---------DEAR3(1)                                                                                  <---------MYB46(3)                        <---------ARR11(3)                                        --------->MYB46(2)                    <---------ANAC58                                              --------->MYB111(1)                    <---------ANAC58                                             <--------P --------RAV1(1)    <---------AtLEC2               XXXXXXXXXXXXXXXXXXXX>MIR847   <---------MYB55(1) -->YAB1        <---------ANAC46                  --------->GLK1(1)    <---------ANAC58 --YAB1         <---------ANAC58            --------->MYB52(1)         <---------ANAC46           --- -----YAB1      <---------ANAC58            ---------->DOF2  ------>ZmHOX2a(1)--------->DAG2    <---- -->ATHB12     <-----------------------TaNAC69(2) <---------GLK1(1)    <---------ANAC58 <----------DOF2 ---ICU4    <---------WOX13(1)       ------>ZmHOX2a(1) ------>ZmHOX2a(1)--------------->AGL15  <-----   tgttgcagtttgtgaatgacttgcatggtcttatcagtcctgtgcctaaaggaactcctcttcctcttgttttacttggaaaggtaggtgctttagagat  18847300  Previous    Next  AGI:  At2g45740.1    Description:  PEX11D. similar to PEX11E [Arabidopsis thaliana] (TAIR:AT3G61070.2); similar to PEX11E [Arabidopsis thaliana] (TAIR:AT3G61070.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96573.1); contains InterPro domain Peroxisomal biogenesis factor 11; (InterPro:IPR008733) Range:  from: 18846790    to: 18848477    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version