Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          --------->TOE2(3)                                                                      <----- --------->ANAC58    ------>MYB46(1)                                                  ----------->GT1 --------->ANAC58  <---------MYB59                                         --------->ZAT14     <----- ----ANAC46--------->WOX13(1)                                              <---------ZAT14    ------- -DOF2 --------->YAB1------>MYB83            <-----------GT1  <----------DOF2    <------ZmHOX2a(1)   tgtaagcaaacatcaattagaccaaattcaatccatctataaccaatttacaaaaactcagtttcttttgtattcagtatagaggataatgtgaatttgg  18845800                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                        --------->ANAC46        <-----------GT1                                                               --------->MYB52(1)     --------->YAB1                                                               <------ZmHOX2a(2)     <---------ICU4                                            --------->ARR14(2) --------->CCA1(2)    <---------ATHB51                              --------->HSFC1(2)             --------->ARR11(3)    <---------ATHB12 <---------AHL20(2)           <---------HSFC1(2)             --------->AGP1 -MYB83 --------->YAB1                      ---------->DOF2    <---------ARR14(2)<---------ARR11(3) -MYB46(1)<---------MYB52(2)               <------ZmHOX2a(1) --------->LBD16    <---------GLK1(1)  <- -->MYB59 --------->MYB46(3)  <XXXXXXXXXXXXXXXXXXXXXMIR4221<---------LBD16      --------->GLK1(1)  <-   tattcaataataacaaaccttgtttaatgggaagaatgcgagagaggaaagaaccatcttctccggtttcgacttggaacagagatccaaacggagctcc  18845900 >ZAT2 >At4g35610                                                                      <---------AHL20(2) >GLK1(1)          --------->ICU4                                                --------->AHL20(2) -At4g35610   --------->YAB1                                                 --------->AHL20(1) -ZAT2 <----------DOF2<---------YAB1    <---------AHL20(1)                   <---------AHL20(2) -GLK1(1) ---------->DOF2               --------->ARR11(3)                  --------->AHL20(2) --------ATHB12  <---------ICU4     <-----------GT1                  --------->YAB1                 < -----ZmHOX2a(2) <--------ATHB1    --------->AHL20(2)         ---------->DOF2--------->AHL20(2)   <--   gatcaatggctttaaagaataattcttattcccaatttttaatatactgcaagaagagggagagaaaagaatcaaaaaaaaaattaaaaacaatagaatt  18846000                                                   <------NtERF2                                                 --------->ANAC58                                                 --------->ANAC46                                                 --------->ANAC58                                                <-------PIF4                                                ------->PIF4                                                ------->MYC2                                                ------->MYC3                                                ------->PIF5                                                <-------PIF5                                                <-------MYC2                                                <-------MYC3                                               --------->ANAC58                                               <---------ATERF1(1)                           --------->ARR11(3)  --------->ANAC46                           <---------ARR11(3)  --------->ANAC58                           --------->AHL20(1) ------->TEIL                           <---------AHL20(1)<---------ALFIN1                         <---------YAB1     <---------SPL7          --------->WOX13(1)       <------ZmHOX2a(1)       --------->GLK1(2) <---------TOE2(3) --------->ANAC58 ------ZmHOX2a(1)  --------->AHL20(2)      --------->ANAC58--------->CCA1(2)    <-----------HVH21 -------TOE2(3)----------->GT1   <---------TOE2(3)------>NtERF2 --------->TOE1(2)   --------->MYB46(3)   gaggatgagaatcaatctggataaattaagatattgaggaagaagacgcacgcgccactagataaacgagcgaagacgagacggtcaccatcgttgatgt  18846100                             --------->TOE1(2)                  --------->O2                           --------->ARR14(2)                   <---------O2                           --------->GLK1(2)                  ------>NtERF2                           <---------ARR14(2)                 ----------->RAV1(1)                          <---------GLK1(1)       <----------DOF2                      --------->ANAC58    ========================HOX2a_HOX2a                      --------->ANAC46    ------>ZmHOX2a(2)  <---------ETT(1)                      --------->ANAC58  --------->ARR14(2)   --------->ANAC46               --------->TOE1(3)        --------->ARR11(3)   ----------->HVH21               --------->TOE2(3)        <---------ARR11(3) ------>ZmHOX2a(1)               --------->AtMYB61        <---------ARR14(2) ==========================HOX2a_HOX2a              <---------HSFB2a(1)       <---------AGP1    --------->TOE2(2)     <---------YAB1              --------->HSFB2a(1)      <---------CCA1(2)  --------->TOE1(2)     ------>ZmHOX2a(1)              --------->HSFC1(2)  --------->ARR14(2)   <-----------GT1         --------->TOE2(3)              <---------HSFC1(2)  <---------ARR14(2)  <-----------GT1         ------>ZmHOX2a(2)   cgagcagaacgctgcaaccttcgcaagcaaatctgggatttggatcttgaggctttttatcctccgacatgactgtctgatccttattgagttccatcga  18846200                         <--------P                         <---------MYB52(1)                       <------MYB46(1)                       <------MYB83                       <---------MYB46(3)                       <------NtERF2                  ------                      --------->MYB59                         <---------ANAC58                 ------                  <---------YAB1                              <---------ANAC58            --------->ANAC58               <---------MYB52(1)                   --------->DAG2                        --------->ANAC58               <---------ARR14(2)    --------->GLK1(2)        <---------ANAC46  --------->TOE1(3)           <---------ZAT14        *TSS  <---------YAB1       <---------LBD16    --------->TOE2(3)<---           --------->ZAT14 --------->MYB52(2)      ---------->DOF2      ----------->GT1   --------->ANAC46   aacaagaagagactgcagttatgtttggttagttttcagtttctgattacaaataaagtgaatggcggattagtaagtaaaaccctaactacacgactaa  18846300                                           <----------ID1                                        <---------ICU4                                     --------->YAB1                                     -------->HAHB4                                     <--------HAHB4                                     --------->ATHB51        <-------GAMYB                <--------ATHB1       ----------->GT1              --------->ICU4       <---------MYB46(3)           <---------ATHB51       <---------DEAR3(2)           --------->AHL20(2)      <---------DREB2C(2)           <---------YAB1                                 <----------DOF2      --------->ETT(1)            --------->YAB1                           --------->ATHB51     ---------->ID1            --------->TOE2(3)                           --------->ATHB12   <-----------RAV1(1)    --------->AHL20(2)                              --------->ICU4 --->MYB52(1)             <---------AHL20(2)    <---------TOE2(3)         <---------YAB1 ---->DOF2            ----------->GT1<---------ICU4             <---------TOE2(3)  ================== ------TOE2(3) ---------->DOF2----------->GT1   <---------TOE1(3)        --------->TOE2(3)   aggttttgtcggttaaataaagagcggtttaaatgttaataattaaggccaaggttagagcccatttaggtgaaacattattgggctttaagagtgctat  18846400                                                                   <--------P                                                                   <---------ANAC46                                                                 <---------MYB46(3)                                                               <-------PIF5                                                               <-------MYC2                                                               ------->MYC3                                                               ------->MYC2                                                               <-------MYC3                                                               ------->PIF5                                                               ------->MYC4                                                               <-------MYC4                                                              =======================================                                                              ==============MYC_MYB                                                              --------->O2                                                              <---------O2                        ------->MYC2                          --------->TGA1a                        <-------MYC4                          <---------ANAC46                        ------->MYC3                          <---------TGA1a                        <-------MYC3                          ============MYC_MYB      ------>ZmHOX2a(1)                        <-------MYC2                          --------->bZIP60(2)     --------->ANAC46                        ------->MYC4                          <---------PIF3(3)    <---------ARR11(3)                       --------->TGA1a                        --------->PIF3(3)    --------->ARR14(2)                       <---------TGA1a                      <---------ALFIN1 --------->ANAC58    ----                       <---------O2                       <----------------PIF3(2) <---------ARR14(2)                       --------->PIF3(3)               <---------ANAC58      --------->ANAC58  ------                       <---------PIF3(3)               <---------ANAC58     --------->LBD16    <-----                       --------->O2                --------->CCA1(2)    --------->PCF2--------->TOE1(3)          ----------->GT1                         --------->ARR14(2) <------MYB83  --------->ARR11(3)      --------->AHL20(2)------->PIF5              <---------ARR11(3) <------MYB46(1)  --------->TOE2(3)      <---------AHL20(2)<-------PIF5           <---------HSFB2a(2)<-------GAMYB   --------->CCA1(1) ================================bZIP_DOF      ------>ZmHOX2a(1)--------->ALFIN1  --------->RVE1(1)   tgccccaaataaatgtaaaaaatccacgtggaatttcaatcttgttgtcctagatatgtgtgccacgtggttgggacgcgcgaaatatcctcaacttccg  18846500                                       --------->ZAT14                                   --------->ANAC46                                --------->ZAT14                                --------->ZAT18                                <---------ZAT14                              <---------ZAT18                              --------->ZAT14                             <---------ANAC46                                                      <-                            <---------------AtSPL8                                                <--                           <---------ANAC46    ---------->DOF2                                    <--      --------->ALFIN1    --------->ALFIN1--------->ANAC46           <---------ANAC46             <-- =======bZIP_DOF    ------>ZmHOX2a(2)--------->ZAT14            --------->MYB52(1)            <------ ------>DOF2       >>>>>>>>>>>>>>>>>LFY<---------ZAT18         <---------WRKY12               <------ --->HSFB2a(2)<------ZmHOX2a(1) <---------REM1(2)              <---------WRKY38(1)        --------->CCA1(2) ----HSFB2a(2)=============HOX2a_HOX2a <---------ZAT14<---------WRKY38(1)        --------->ATHB12----   aaagcagagtgggagaggatgatccaatgtggtgtacacagtacacataaaaagagtcaacatgatcaacggcttagaatgaaagattgaagagatgagt  18846600            <---------bZIP60(2)         ----------->HVH21       ------>MYB46(1)       --------->MYB52(1)       ------>MYB83     --------->MYB46(3)                                    <---------ARR14(2)     <---------MYB55(2)                                    --------->ARR14(2)    --------->ANAC46                                      <---------CCA1(2)  <---------WRKY18(1)                                --------->ANAC58 ----------->HVH21                                   --------->ANAC58 --------->WRKY38(1)                             ------>MYB46(1) --------->WRKY45                                ------>MYB83                            <---------ARR11(3) --------->WRKY12                           >>>>>>>>>>WRKY43                             --------->ARR11(3) ------GAMYB<---------O2                    >>>>>>>>>>WRKY26                      ---------->DOF2 -------ANAC46                              >>>>>>>>>>WRKY38                    --------->YAB1 -------ANAC58                           <---------At4g35610                   <<<<<<<<<ARR2 -------- -------ANAC58                           --------->At4g35610                   <---------ATHB12 ---ANAC58  --------->O2       <---------HSFB2a(2) ---------->DOF2        --------->ANAC46   -------- ---ANAC58------->GAMYB        --------->HSFB2a(2)<---------ATHB12        --------->ANAC58   -------- ----->ZAT18<---------ANAC46  <---------LBD16  <---------MYB59            --------->ANAC58<------ZmHOX2a(2)   gcgttgacccaacgacgtgttttgtctgtttatcgggaaacgaagatgaccaaacaagccctatctccgattacacacacaatcaaaagaagatcaagcc  18846700  Previous    Next  AGI:  At2g45730.1    Description:  eukaryotic initiation factor 3 gamma subunit family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO60999.1); contains InterPro domain Eukaryotic initiation factor 3, gamma subunit; (InterPro:IPR007316); contains InterPro domain tRNA (adenine-N(1)-)-methyltransferase, non-catalytic TRM6 subunit (InterPro:IPR017423) Range:  from: 18843338    to: 18846234    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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