Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 --------->MYB46(3)                                             ----------->RAV1(1)                                          --------->ANAC58          <---------GLK1(2)    ----------->RAV1(1)                             <-------GAMYB ---------ANAC46     <---------YAB1       --------->ANAC58                    <-----------RAV1(1) -------AGL15      --------->YAB1--------->REM1(1)                            --------->ALFIN1     <- --------AGL3     <---------ATHB51<---------ARR11(3)                 ------->TEIL     <------ZmHOX2a(1)   ttgggtaaactagaaactcaattatacttactgcaacatctgtgaagcaacaatctcagagatgaaacatgaatatgtgtgtgttgcaggaagcgagaga  18802600                                                                                     <----------ARF1                                                                                     <---------ETT(2)                                                                                     --------->ETT(2)                                                                                  <---------MYB46(3)                                                                                  <------MYB46(1)                                                                                  <------MYB83                                                                                 --------->ALFIN1                                                                               <---------ANAC46                                                              --------->ANAC58 <---------ANAC58                                                              --------->ANAC58 <---------ANAC58                                                     <---------MYB52(1)       <------MYB46(1)                                                  ------>ZmHOX2a(2)           <------MYB83                                                 <------ZmHOX2a(2)          <--------P                                                --------->GLK1(2)      ------>ZmHOX2a(2)                 <------NtERF2                  --------->ARR14(2)   --------->ARR11(3)               --------->ALFIN1                 <---------ARR14(2)   <---------ARR11(3)             --------->ALFIN1                  <------ZmHOX2a(1)   --------->ICU4<---------AtMYB61 -----ZmHOX2a(1)<---------MYB46(3)             ===============================HOX2a_HOX2a   aggactggacgagaagggtggggaacgataggcacttgatatgcatagaggatccgtttgagacgagccatgatctgggtagggtggtcgacaagtttag  18802700                                                              ------->MYC2                                                              <-------MYC3                          <                                                              ------->MYC3                          -                                                              <-------MYC2                          -                                                      ------>ZmHOX2a(1)                            <-                                                     <---------MYB59                               <-                                                    ------>ZmHOX2a(2)                              --                                                   <------ZmHOX2a(2)               --------->ARR14(2)                                    --------->YAB1--------->ARR14(2)               <---------ARR11(3)                                   --------->ICU4 <---------ARR14(3)               <---------ARR14(2)                                  --------->ANAC58<---------ARR14(2)      --------->HSFB2a(2)    ----                <------ZmHOX2a(1) --------->ANAC58--------->ARR14(3)      <---------HSFB2a(2)  <-----          <---------ANAC46  --------->At4g35610   <---------ARR11(3)--------->ANAC58           ------      <---------ZAT14       <---------At4g35610   --------->ARR11(3)--------->ANAC58      ------>ZmHOX2a(1)     --------->ALFIN1  ---------->DOF2   <---------YAB1 >>>>>>>>>MYB98 <----------DOF2    --------->LBD16   tatcagagtgttgagggaggagttcgaaagagctgcaaggattatgcatcaagatcctaacccatgtgccaagcttttggaaccatatattcctgaagat  18802800                                                       <---------ANAC58                                                       <---------ANAC58                                                  <-----------RAV1(1)                                                <---------ANAC46                                                <---------ANAC58                                                <---------ANAC58            --------->RAP2.6(2)                <-------TEIL ---------ICU4                               --------->ARR14(2) -------->YAB1                               <---------GLK1(2) ------->HAHB4                               <---------ARR14(2)<---------AHL20(2) --------ATHB51        <----------DOF2      <------NtERF2     --------->ARR11(3) --------YAB1     ------->GAMYB           <---------ANAC46    <---------AHL20(1) ------->ICU4   --------->At4g35610       <---------ANAC58    <-----------------AGL3                < ----->YAB1--------->ZAT18                <---------ANAC58    <---------ARR11(3)                    < ----ARR11(3) <---------ALFIN1           <---------LBD16 ----------->GT1                          <-- --->ARR11(3) --------->MYB46(3)     <---------AtLEC2  <---------ANAC46          <-------TEIL <------   aataatggacaaggccacaactgaacttttaaaacatttgaatggcggattcgtgtggcttgtatatatttatgggtagaagattcatgctctgttcttt  18802900                                     ------>MYB83        <-------GAMYB                ----------->RAV1(1)                                     --------        <---------ANAC58             ------>MYB46(1)                                  <---------MYB46(3)        <---------ANAC58           --------->MYB46(3)                                --------->ALFIN1       <---------MYB46(3)          <---------MYB59                                 <---------TGA1a <---------DAG2                ----------->HVH21                 <---------ARR11(3)<---------bZIP60(2) <----------DOF2           <---------ANAC58       --------->ARR11(3)               <---------O2 ----- ---------ANAC58           <---------ANAC58       <---------ARR11(3)      <---------YAB1     <------- ---------ANAC58     <---------ARR11(3)       ===============================================bZIP_DOF ---------GT1        --------->ARR11(3)   ---------->DOF2        --------->ARR11(3)<---------ANAC46 *TSS ----DOF2   <---------YAB1 <---------ANAC46   ---------->DOF2    <---------GLK1(2) <-----------RAV1(1)   ttgcttttttggttgtgatttgaaatcttgcttgtgacccaacaaaaagaaaggtcttagttttgaagatttttgtatgatggtgatgtgggtggatttc  18803000                    ----------->HVH21                  <---------ANAC58                  <---------ANAC46         <---------ZAT6                                              <---------ICU4         ----------->GT1 ----------->GT1                             -------->HAHB4       <---------ANAC46<---------ANAC58                             --------->ICU4       <---------ANAC58<---------ANAC46                           <---------ICU4       <---------ANAC58<---------ANAC58                           --------->YAB1       <---------bZIP60(2)    ---------->DOF2                  --------->YAB1   ------->MYC3   <---------ANAC55(2)                         <---------AHL20(2)                -----   <-------MYC3   <---------ANAC58                           --------->AHL20(2)          --------->ANAC58 ->GLK1(1)        --------->ANAC55(2)                     <---------AHL20(2)             --------->ANAC58 ---->TOE2(3)     <---------AtLEC2                        --------->AHL20(2)        --------->WOX13(1) --GLK1(1)   --------->MYB52(2)              --------->ICU4  <---------AHL20(2)   <------ZmHOX2a(2)   ttaaacgtgtcgtgttatttgcgtgacttgaaaaaagaagtgagataattttgaaaacaattttttaataataatgcaaaacagatcaatctcgcaagtc  18803100                                           ------>ZmHOX2a(1)                                     ------->MYC2                                     <-------PIF5                                     ------->MYC3                                     ------->PIF5                                     <-------MYC3                                     <-------MYC2                                     <-------MYC4                                     ------->MYC4                                    <---------TGA1a                                    --------->TGA1a                                             <----                                    --------->bZIP60(2)                                       <------NtERF2                                    <<<<<<<<<<AtMYC2                                         <-------                                    <<<<<<<<<<ABI5             ------>NtERF2                 ------>NtERF2                                    <---------O2              --------->ANAC58               <-------                                    --------->O2              --------->ANAC58              <--------                                    --------->ANAC55(2)       --------->bZIP60(1)           ---------                                    <---------ANAC55(2)       --------->ANAC46            <----------                                    <<<<<<<<<<HY5             --------->DEAR3(1)        <-------TEIL                                    <--------ABF1            --------->SPL7           <---------GLK1(2)                                  <---------ALFIN1          <---------ATERF1(1)       --------->ARR14(2)                                  <------------OsbHLH66     <---------ALFIN1          <---------ARR14(2)                                <-----------HVH21           ------>NtERF2          <---------ANAC46              <---------ARR11(3)<----------------PIF3(2)   ----------->HVH21      --------->ATERF1(1)         <------NtERF2        ================MYC_MYB     <---------HSFB2a(2)     <------NtERF2 -----        ------>NtERF2         <------------AtMYB77        --------->HSFB2a(2)    ------>NtERF2-------       <----------ID1       <---------ARR14(2)            --------->DEAR3(2)    ----------->HVH21    <---------DEAR3(1)      --------->ARR14(2)  <-----------HVH21               <---------DEAR3(1) ---->RAP2.6(2)             --------->GLK1(2)   --------->TOE2(3)         <-----------HVH21----------   gcaacgatggcgacgagctcttccaccgagaaactgccacgtgtcctcatcgtcaaacgtcccgacgccatggctgtgttaggcgacggattcgtcgcct  18803200                 ---------->DOF2              --------->TOE2(3)             ------>ZmHOX2a(2)           <---------ARR11(3)           <---------GLK1(2)           --------->ARR14(3)           --------->ARR11(3)           <---------ARR14(2)           <---------ARR14(3) -----ATERF1(1)------>ZmHOX2a(1)              ------>ZmHOX2a(1)                             --------- --RAP2.3(1)===================================HOX2a_HOX2a                            ---------->DOF2 --ATERF1(1)<------ZmHOX2a(2)                 --------->LBD16                        --------->YAB1 -DEAR3(1) --------->ARR14(2)           ------>ZmHOX2a(1)                           <---------YAB1 >DEAR3(1) --------->AGP1         --------->At4g35610                           --------->LBD16 -HVH21 <---------HSFB2a(2)       <---------At4g35610                           ------>NtERF2 ->NtERF2 <---------GLK1(1)   --------->ARR14(2)              --------->ZAT6   --------->ANAC46   --- -->ATERF1(1)==================================HOX2a_HOX2a   <---------ATHB12 <---------LBD16     <-- >ID1   --------->HSFB2a(2)   <---------ARR14(2) --------->GLK1(1)          --------->ARR14(2)    <--   ccaccaagttcgagatcctcaaagccttcgagtctccgcttcctcttcctgaattcttggcctatcactctgactccatctccgccattatagcccctgt  18803300                                                                         <---------WRKY18(1)                                                                        --------->WRKY45                                                                        --------->WRKY38(1)                                                                        --------->WRKY12                                                                        ----------->HVH21                                                                       --------->DOF5.7(2)                                                                      <-------GAMYB                                                                    <------NtERF2                                                                   --------->LBD16                                                                   ------>NtERF2                                                                   <---------ATERF1(1)                                                                  --------->RAP2.3(2)                                                                  --------->ATERF1(2)                                                                  <---------DEAR3(1)                                                                  <---------ATERF1(2)                                                                  --------->RAP2.3(3)                                                                 --------->ATERF1(1)                   ------>ZmHOX2a(2)                             --------->DEAR4(2)                  <------ZmHOX2a(2)                              --------->ERF1                  =====================HOX2a_HOX2a               --------->RAP2.3(1)        ----------->HVH21                           <-------GAMYB<---------LBD16       <-----------HVH21    <---------ARR14(2)   <-------GAMYB  ------>NtERF2      --------->LBD16       --------->ARR14(2)   <---------ANAC58--------->ORA47(2)                 <    <---------LBD16====================HOX2a_HOX2a <---------MYB46(3)<---------DEAR3(1)            <- --------->ZAT2 <---------RAP2.6(3)             <------MYB83    <---------ATERF1(1)              ---- --------->At4g35610  <---------GLK1(2)         <------MYB46(1) <---------RAP2.3(1)              <--- -->RAV1(2)  <---------At4g35610                <---------MYB46(3)--------->DEAR3(1)             <--- ------>At4g35610<---------ARR14(2)     <---------ICU4<-----------GT1<---------ANAC46       <-------- -------ZAT2--------->DEAR3(1)  ------>ZmHOX2a(1)<---------ANAC58<------NtERF2              <-------- -------At4g35610--------->ARR14(2)   <-----------ARR10        --------->DEAR3(1)           <--------   agctgctccggtcacagccgatctgattcgcatcctccctaatcttcgcttggttgttactaccagcgccggcgttgaccatgttgacttagttgagtgt  18803400                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                 <---                                                                                               <-----                                                                     --------->ZAT14           ------                                                               ------>NtERF2                  -------                                                               <---------RAP2.6(3)            <------                                                              <---------ANAC46                -------                                                              <---------ATERF1(2)             <------                                                              <---------TGA1a              <------NtERF2                     ------>NtERF2                     <---------ARR14(2)                  ------>NtERF2                    --------->DEAR3(1)                 --------->ARR11(3)                  --------->LBD16          --------->GLK1(1)                     <-----------HVH21 <---------MYB46(3)      --------->DEAR3(1)  <------NtERF2<-----------HVH21               <-----------RAV1(1)<---------DEAR3(2)      --------->RAP2.6(2) <-----------HVH21 <------NtERF2               <---------REM1(1) <---------DEAR3(1)       --------->RRTF1(2) ---------DEAR3(1)------>NtERF2               <---------ARR11(3)<------NtERF2             --------->RAP2.3(2) -----NtERF2   <---------ATERF1(1)     <---------HSFB2a(2)    --------->ATERF1(2)        --------->RAP2.3(1) ----->bZIP60(1) --------->DEAR3(1)    --------->HSFB2a(2)    --------->DEAR3(1)        ------>NtERF2 ------bZIP60(1) <---------ETT(2)      <---------LBD16 <---------GLK1(2)                --------->LBD16 ------ANAC46 --------->ANAC46     <---------GLK1(2)   --------->ARR14(2)       --------->O2 <------- -ANAC58  --------->At4g35610    --------->ANAC58    <---------TOE1(2)          <---------O2 ------->TEIL -ANAC46  <---------At4g35610    --------->ANAC58 <---------ANAC46--------------------->WRI1<-------- -ANAC58  <---------GLK1(1)------>NtERF2      --------->ARR11(3)<---------MYB52(1)     --------->ANAC46   cgtcgtcgaggcatctccgtcgccaacgctggctcaagcttctcggaagatgtcgcagatactgccgtcggtttactcatcgacgtcttccgccgcatct  18803500  Previous    Next  AGI:  At2g45620.1    Description:  nucleotidyltransferase family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G45750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24439.1); contains InterPro domain Nucleotidyltransferase; (InterPro:IPR002934); contains InterPro domain PAP/25A-associated (InterPro:IPR002058) Range:  from: 18799938    to: 18802978    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g45630.1    Description:  oxidoreductase family protein. similar to oxidoreductase family protein [Arabidopsis thaliana] (TAIR:AT1G12550.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77385.1); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; (InterPro:IPR006139) Range:  from: 18803000    to: 18804085    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version