Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------DEAR3(2)                      --------->ATERF1(1)      <-------GAMYB         <------NtERF2                             <------NtERF2    <---------TOE2(3)     --------->DEAR3(1)                         <-----------HVH21    <---------TOE1(3)     <---------DEAR3(1)                --------->ANAC46                     <--- ---->RAV1(2)             --------->ANAC46              <------ZmHOX2a(2)                       ----- ---At4g35610            --------->ATERF1(1)           <---------ARR14(2)                     <------ ---ZAT2                <---------ATERF1(1)            --------->ARR14(2)                     ------- -->ZAT2   --------->ANAC58------>NtERF2       <---------At4g35610  --------->DEAR3(1)--------->ATHB12 -->At4g35610       ----------->HVH21          <---------ZAT2       --------->RAP2.3(2) <---------YAB1 ---RAV1(2)--------->ANAC58<---------RAP2.3(1) --------->ZAT2      --------->DEAR3(2)<---------YAB1   ggagttagggttgaagcaaggtttgacgacgccggtttccatagcatcgagctggtcgatccacgacgagccgtcgctcttcttaatatgattagagatt  18799500           <---------YAB1          --------->KAN4(2)         <---------KAN4(1)                     <---------MYB52(1)        <---------YAB1                        --------->At5g28300 ------AHL20(2)                              ----------->GT1 ---->AHL20(2)                              <------------MYB.PH3(1)                            ------ ---ARR11(3)                <---------At4g35610--------->DOF5.7(2)                     <-----------GT1 -->ARR11(3)  <----------DOF2              <---------At5g28300                 ----------->HVH21   ttataagttgattattcttttcaagttttcatctaagcattctataaccgttaattttctcattttctattttgtatacatatgacattttacattgaac  18799600                                                                                                <----                                                                                               ------                                                           --------------->AGL15              <------                                                 <---------YAB1                               -------                                                 <---------TOE2(3)                            <------                                             --------->TOE2(3)<---------YAB1  <-----------GT1 <------                        <----------DOF2 --------->AHL20(2) <---------------AGL15              <------ ->TEIL           <-----------GT1   <---------YAB1      <-----------GT1    <---------ICU4     -------   gttgttacatagcacaaatgttacttcttttgtgttttttgataaaatgttaacattgttacttcttattgtattcatttttacaattccacaattccgt  18799700  <-----------GT1 -----MYB52(1) --->LBD16                                                <---------ZAT14 ---ANAC58                                     --------->ANAC55(2) ---->GT1--------->AHL20(2)                    <---------ANAC55(2) ---ANAC46          <---------GLK1(1)  --------->YAB1     --------->ZAT14 ---ANAC58<-----------GT1        --------->TOE2(3)<-----------GT1 ---ANAC55(2)       --------->GLK1(1) <---------ATHB12 ------>MYB83                        <--------- -->ANAC55(2)   <---------WOX13(1)  --------->WOX13(1) ------>MYB46(1)                   --------->At4g35610   aatttcacaaatttactaattgaaatccatttcattctcaatcatacttaagtaacctactgtagttgaattttaagtccaacttgtgatcagctttaaa  18799800                                                                                       ---------->DOF2                                                                                       <---------DOF5.7(2)                                                                                     <---------MYB52(1)                                                                                  ------>ZmHOX2a(2)                                                                                  <-------TEIL                                                                                 <------ZmHOX2a(2)                                                                                <---------ARR11(3)                                                                                --------->ARR14(2)                                                                            --------->ANAC46                                                           --------->AHL20(2)   --------->AGP1                            --------->ARR11(3)             <---------AHL20(2)   <---------ARR14(2)                           --------->GLK1(1)               --------->AHL20(1)  --------->GLK1(1)                           <---------GLK1(1)            --------->YAB1      --------->ANAC58                          <---------ARR11(3)           <---------AHL20(2)   --------->ANAC58                         <------ZmHOX2a(1)       <----------DOF2          --------->ANAC46        ---                      <-----------RAV1(2)        ------>ZmHOX2a(1)      <---------ALFIN1  -----------               <---------SPL7                   --------->TOE2(3)       --------->ANAC58 <---------TOE2(3)               ----------->HVH21             <---------ARR14(2)     =====================HOX2a_HOX2a              --------->TOE1(1)              --------->ARR14(2)     ====================HOX2a_HOX2a              --------->TOE2(1)              ------->TEIL  <---------AHL20(1)  <---------GLK1(1)  --- ---------->DOF2 --------->SPL7   --------->ALFIN1 --------->AHL20(2)   --------->ANAC58 <---------TOE1(3) -DOF2--------->YAB1<-----------HVH21       <---------CCA1(2)       <------ZmHOX2a(1)--------->DOF5.7(2)   aacaaaagtcataacatcggacggtcaggatatcatgtgtgaggctgtatcctttaaataataaaatagaggacacacacgagatccgttaaaggttaaa  18799900                          <---------MYB46(3)                       <---------MYB46(3)                       --------->MYB55(2)      ------>ZmHOX2a(2)                      --------->ALFIN1        <------ZmHOX2a(2)              <------ZmHOX2a(2)              <---------ARR11(3)              --------->GLK1(1)              --------->ARR11(3)              <---------GLK1(1)              --------->ARR14(3)             <---------ARR11(3)              <---------ARR14(3)             --------->ARR11(3)       *TSS   --------->AGP1             <---------AGP1   --------->WOX13(1)         ---------->DOF2 <---------AtMYB61   <---------ARR14(2) ------>TOE2(3)       <---------AtMYB61      --------->ARR14(2)                                   <-- >GT1---------->DOF2  <---------DEAR3(1)   ----------->ARR10            <----------DOF2           <-- ------>TOE1(3)------>ZmHOX2a(2)     <------------CBF                <-----------GT1        <--------   ccttgaagaaagaaagatctctcggtggtggtcattcaacattgtaagatcttcgacttggcaaaattgtttcactttcgctctaaaaacttcatcttca  18800000                            --------->At4g35610                            <---------At4g35610                          <------NtERF2                         --------->ABI4(2)                         <---------MYB46(3)                      <---------DEAR3(2)                     <---------DEAR3(1)                    <---------ORA47(1)                    --------->SPL7                   ------>NtERF2                   <------NtERF2                  ----------->HVH21              <---------YAB1                  <---------SPL7               --------->AtMYB61                                   --                 <---------ANAC58       --------->ZAT2                                        -------                 <---------RAP2.6(2)    --------->At4g35610      --------->At5g28300      --------->ANAC58                 <---------ANAC46     <---------ALFIN1          --------->LBD16           --------->ANAC58          ------>ZmHOX2a(1)<---------PCF2   <---------ALFIN1   <---------DEAR3(1)         --------->ANAC46 -------DAG2     <---------ANAC58------->TEIL --------->MYB46(3)----------->GT1           --------->ANAC55(1) --------DOF2  <------------------SPL14 <---------At4g35610   <---------LBD16            <---------LBD16 -ICU4 ------>ZmHOX2a(1)--------->ALFIN1<---------ZAT2      --------->ANAC46            <---------AtLEC2   ctttctctcctcctccatggcggacggtggggctgaacctccagctccaccatcatcgataaacgccggtgaatttctcttgtctattttgcacggaagt  18800100        <-----------TGA1        <-----------HVH21       <---------bZIP60(1)       --------->O2       --------->bZIP60(1)      <------NtERF2     <-----------HVH21                         ===============================HOX2a_HOX2a     ------>NtERF2  ------>ZmHOX2a(1)          <------ZmHOX2a(2)                 --------->YAB1------     <---------ATERF1(1)       --------->WOX13(1)           ------>NtERF2       <---------ATHB12    --------->DEAR3(1) --------->At4g35610    <---------ARR14(2)        -------->P    <----------DOF2  <XXXXXXXXXXXXXXXXXXXXMIR3932A/B<---------ATHB12   --------->MYB46(3)  ------>MYB83  ------>ZmHOX2a(1) ---->ZmHOX2a(1)    ==================================HOX2a_HOX2a       ------>MYB46(1)     ------>ZmHOX2a(1) -->GLK1(1)     <---------ARR11(3)            --------->ARR14(2)       ------>ZmHOX2a(1)XXXXXXXXXXXXX   ccttcgccgtcgtcacaaggtcctcagcatcatcagtcattcgctctcgatccagccatcgcagccattggtcctaccgtcaataatccttttcctccgt  18800200                                --------->YAB1                               --------->ICU4                    --------->MYB46(3)                            <---------ALFIN1                 <---------WRKY38(1)                       <----------DOF2   <---------ICU4                --------->WRKY18(1)   ------->GAMYB       <---------DAG2   --------->GLK1(2)      ---               <-----------HVH21<---------ICU4         --------->ANAC58    <---------ARR11(3)     <--              ------->GAMYB    <---------ATHB12        --------->ANAC58--------->YAB1<---------ALFIN1      --------->WOX13(1)       <---------YAB1        <---------ALFIN1 ------>ZmHOX2a(1)  <---------ARR11(3) --->LBD16 --------->MYB52(1)--------->YAB1------>ZmHOX2a(1)   <-----------GT1     --------->ANAC46<- XXXXXXXX>MIR4221<---------WRKY12  <-----------GT1<---------ZAT18<---------At4g35610--------->LBD16--   cgaattggcaatctaacggtcatcgacccagtaatcataaccctccttcttggccactcgccttttcacctcctcataatctttcccccaatttcttagg  18800300                                                                        <---------YAB1                                                                       <---------ANAC58            ------>NtERF2                                              <---------ANAC58   --------->LBD16            --------->LBD16                                   <---------HSFB2a(2)         --------->HSFB2a(2)          <---------LBD16                                     --------->HSFB2a(2)         ------>ZmHOX2a(1)        --------->ARR14(2)                                   <---------LBD16              <---------HSFB2a(2)        <---------ARR14(2)                               --------->ARR11(3)              <---------LBD16   ------>ZmHOX2a(1)             --------->MYB46(3)      <---------ARR11(3)             ----------->RAV1(2)  --------->TOE2(3)             ------->TEIL             <-----------ARR10           <---------GLK1(1) ------>GLK1(1)              <---------MYB52(2)          --------->ARR14(2)          --------->GLK1(1) -------GLK1(1)           --------->ANAC46               <---------ARR14(2)       <---------TOE1(3) --------ARR14(2)     <-----------HVH21           ---------->DOF2      <---------ANAC46 <---------ANAC46 ------->ARR14(2)    <----------DOF2        --------->At5g28300--------->LBD16    <---------TOE2(3)   gtttcctcaatttccgcctagccctttcacgacgaaccaattcgacggtaatcaaagagtatctccagaagatgcttatagattagggtttcctggaact  18800400  Previous    Next  AGI:  At2g45610.1    Description:  hydrolase. similar to hydrolase [Arabidopsis thaliana] (TAIR:AT2G45600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24438.1); contains InterPro domain Alpha/beta hydrolase fold-3; (InterPro:IPR013094) Range:  from: 18798537    to: 18799660    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g45620.1    Description:  nucleotidyltransferase family protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G45750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24439.1); contains InterPro domain Nucleotidyltransferase; (InterPro:IPR002934); contains InterPro domain PAP/25A-associated (InterPro:IPR002058) Range:  from: 18799938    to: 18802978    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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