Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            ------>NtERF2                                                                          <---        --------->ATERF1(1)                                                                      <xxx        --------->RAP2.3(1)                                        --------->LBD16     ----------->GT1        <------NtERF2                                             <---------LBD16      <------MYB83       <---------RAP2.3(1)                                        <---------HSFB2a(2)  <------MYB46(1)       <---------ATERF1(1)                            --------->ARR14(2)              --------->MYB59      <---------ANAC46                                --------->GLK1(2) <---------ANAC58   --------->DAG2      --------->ALFIN1                                ------->TEIL--------->HSFB2a(2) --------->MYB46(2)      <---------DEAR3(1)               ==========================HOX2a_HOX2a        <---------ANAC46     <------NtERF2                     ------>ZmHOX2a(2)         <---------LBD16  <---------MYB46(3)     --------->ATERF1(1)              ===========================HOX2a_HOX2a      --------->MYB55(2)     <---------LBD16                  <------ZmHOX2a(2)       <---------GLK1(1)  <---------AtMYB61 --    <---------RAP2.3(1)              <---------ARR14(2)    <---------TOE1(2)    <---------MYB52(1) <-   <---------DEAR3(1)          <----------DOF2        <---------ARR14(2)<---------ANAC58  ---------->DOF2   <---------RAP2.3(2)      ------>NtERF2    --------->ICU4<---------TOE2(2)   --------->LBD16  -----  <---------At4g35610 <----------DOF2--------->ARR14(2)   ------>ZmHOX2a(1)  <---------LBD16    <---- -------->DOF2 <---------ARR14(2)    --------->ARR11(3)  --------->TOE2(2) --------->ARR14(2)  <----- ------>RAV1(2)--------->ARR14(2)    <---------ARR11(3)  --------->TOE1(2) <---------ARR14(2) -------   ctgaagcggcggagccaaatccgactttgcctcctttaagatcggtgatgttgacgaatcctaggtttccgggagcgtttccggtggtttggtaaagtgt  18750800                        ------>ZmHOX2a(2)                       <------ZmHOX2a(2)                      --------->ARR11(3)                      --------->ARR14(3)                                 ---------->DOF2                      --------->ARR14(2)                          <------ZmHOX2a(1) ------ANAC46         <---------ARR11(3)                        --------->ALFIN1 xxxxxxxxxxxxxxxxxsmallRNA(fl3)                          <------ZmHOX2a(1)--------->DAG2 ------->ALFIN1       <---------ARR14(3)    =============================HOX2a_HOX2a --------ANAC46       <---------ARR14(2)    ------>ZmHOX2a(2) <---------TOE2(1)           ------->GAMYB ---->ALFIN1          --------->AGP1        ====================HOX2a_HOX2a            --------->MYB52(1) -----AtMYB61        --------->GLK1(1)      =======================HOX2a_HOX2a      --------->YAB1 ----ZAT14           <---------GLK1(1)    --------->ARR14(2)  <---------TOE1(1)   --------->AHL20(2) -->ALFIN1     <----------DOF2            <---------ARR14(2)<------ZmHOX2a(1)   <----------DOF2 -----   ggtggagagagttgtgcctttggagatcttgtggagtttttgtggatcgtagtaatcgaggaggacgaggaggcttaaagcgcttttaataacggagagt  18750900                                                                             <---------DEAR3(2)                                                                     --------->ARR11(3)                                                                 <---------At4g35610                                                                 <-------GAMYB--------->ATERF1(1)                                                                --------->MYB55(2)                                                                <---------MYB46(3)   <-------TEIL                                                              <---------At4g35610 --------->ZAT2                                                            <---------RAP2.6(2)   <---------ZAT2               <---------At4g35610                          <---------DEAR3(1)<------NtERF2        ------>NtERF2                 <------ZmHOX2a(1)    --------->SPL7    ------>NtERF2        --------->LBD16              <----------ID1       --------->ALFIN1  <---------DEAR3(1)       <---------LBD16    ------>NtERF2                  <---------SPL7------>ZmHOX2a(2)           <-      <---------LBD16    --------->ANAC46               <---------ANAC58    <---------At1g77200 ----- ---->ALFIN1   --------->At4g35610  <---------TOE2(3)   <---------ANAC58  <-----------HVH21   -------   ggatgttttccggcgagagcagacattgcgccattgttaaggacgagaactgtaatcgtcgtgcggctgttgatctcgtcggcgagcttcgtctgagaaa  18751000   <---------MYB46(3)                                                              --------->ALFIN1 --------->At4g35610                                                       --------->DAG2 <---------ZAT2                                      <---------ANAC46    ---------->DOF2 <---------At4g35610                  --------->ARR14(2)              --------->ANAC58    --------->DAG2 -------P                             <---------ARR14(2)          --------->ALFIN1<------ZmHOX2a(1) ---->DAG2                  --------->GLK1(2)   <-----------RAV1(1)   --------->ANAC58   ---------->DOF2 --->DOF2            <---------LBD16 <------ZmHOX2a(1)       --------->MYB52(1) --------->ALFIN1   ggtagctgttgaaggaagagtaatctggagaatcagcgaggatttgagtgatgttgtggctactcacggtggaagcaaaggcgaggagggagaaagtgaa  18751100                              --------->YAB1                             --------->ICU4                          <------NtERF2                         <---------RAP2.6(3)                         ------>NtERF2                        --------->RAP2.6(2)                        --------->DEAR3(1)                        --------->RAP2.3(2)                        --------->DREB2C(2)                        --------->RRTF1(3)                        --------->RRTF1(2)                        --------->RAP2.3(3)                        --------->ANAC46                       --------->ERF1                       --------->RAP2.3(1)                       --------->RRTF1(1)                       --------->RAP2.6(1)                       <------NtERF2                       --------->ATERF1(1)                       --------->ORA47(2)                      <---------RAP2.3(1)                      ------>NtERF2                      <---------RRTF1(1)                      <---------ATERF1(1)                               --------->At4g35610                     <---------O2                                    --------->At4g35610                     <---------bZIP60(2)                             <---------At4g35610                     --------->bZIP60(1)                         --------->ALFIN1                  ----------->TGA1                              --------->ZAT14                  ----------->HVH21                             <---------ZAT14      *TSS                 <-----------HVH21----------->HVH21            --------->ALFIN1--------->ALFIN1   <------ZmHOX2a(1) <---------bZIP60(1)                  <-----------HVH21<------ZmHOX2a(1)   ggcgaggagtgagaatgtctgtgacgccgccatgatgagacggttttgagttttttcaagtgtcagtgtggagcagaggaagtggagaagactgagtgag  18751200                                                            <------MYB46(1)                                                            <------MYB83                                       --------->At5g28300 --------->MYB59                           <---------WOX13(1)              --------->MYB46(2)                          <------------CBF               <---------MYB52(1)       <---------AHL20(2)             ---------->DOF2      --------->MYB46(3)<---------ICU4             ----------->GT1        ----------->GT1  --------->ATHB12       <---------YAB1                 <---------ZAT6   --------->CCA1(2)    <---------YAB1----------->GT1 <---------YAB1 --------->ARR14(2)           <--   --------->At4g35610<------ZmHOX2a(1)<-------GAMYB--------->YAB1   <---------ARR14(2)     <--------   aagagagatgaagttaaaagagaaggatgattgttaaccacggttaaattttgatcatggttaggttagagtatttgactagagttaattttgcctttat  18751300                                          --------->ALFIN1                                      <------MYB83                                      <------MYB46(1)                                    <--------P                                  <------MYB83                                  <------MYB46(1)                     --------->At4g35610                     --------->YAB1<-------GAMYB         <----------DOF2          ---------->DOF2              ----------->GT1     <---------ANAC46 ------->MYC3       --------->ZAT2               -- -------AHL20(2)<---------ANAC46 --------->MYB59   <-------MYC3       <---------ZAT2               <- --DOF2     <-------GAMYB     <-------GAMYB   ------>NtERF2  <---------LBD16  >>>>>>>>>TBF1       ---   atttttgaaatgtgtgttgtttataagaagtgagttgggttggattggggccatgtgttctttttcggacatagctggaagaagaaaagaggccattcca  18751400             <---------ANAC46          ---------->ID1                                       <---------RVE1(1)      <---------ANAC58                                         <---------CCA1(1)      <---------ANAC58                 --------->CCA1(2)      --------->ARR11(3) ------->AHL20(2)            --------->AHL20(2)               <---------ARR11(3)   <<<<<<<<<<<<<<<<<LFY --------AHL20(2)            <---------AHL20(2)      <-----------GT1             --------->AHL20(2) ------>AHL20(2)        --------->ANAC46         <----------DOF2         ---------->ID1   tttaattgtcttgttgtttatattacaccaaaaaattagagatttgggcttctttttactcttagatatttgtttggcctaaataaaacactggagattg  18751500                                                         --------->ZAT14                                                  <---------MYB46(3)                                              --------->ALFIN1                                            <-----------RAV1(1) ---------->ID1                  <---------ANAC46<---------AtMYB61   tttctcgttttcttcatctaaattgatcaatagtgtcgagttttatatgtggtggtcagtgtattcagtaatgctatctattttgttatcgaaaatgttt  18751600                       <------MYB46(1)                       <------MYB83                           --------->ATHB12                      <---------AtMYB61                       <--------ATHB1             <---------ANAC58                                <---------YAB1             <---------ANAC58                                <---------ATHB12   <---------ANAC58       --------->AHL20(2) --------->ZAT14                    --------->ICU4     <---------ANAC58    <---------------AGL15 <---------ZAT14      ------->TEIL--------->YAB1       <---------ANAC46  ---    --------->TOE2(3)<---------WOX13(1)       <---------CCA1(2)           <<<<<<<GRF7----------->GT1    --------------->AGL15<---------REM1(1)  <---------ANAC55(2)         ----------->HVH21         <-- <-----------GT1    <---------ARR14(2)      --------->ANAC55(2)       ----------->RAV1(2)         <--   tatataccataaattgtttgtggattggtgtagtgaccaatacaatatgtatcttactcaacaatgattcaaacctgacatttcgtatagtagaaaacaa  18751700  Previous    Next  AGI:  At2g45470.1    Description:  FLA8 (Arabinogalactan protein 8). Identical to Fasciclin-like arabinogalactan protein 8 precursor (FLA8) [Arabidopsis Thaliana] (GB:O22126;GB:Q56ZW9;GB:Q8L9B1;GB:Q9FR46); similar to FLA10 (fasciclin-like arabinogalactan-protein 10) [Arabidopsis thaliana] (TAIR:AT3G60900.1); similar to fasciclin-like arabinogalactan protein 13 [Gossypium hirsutum] (GB:ABV27484.1); contains InterPro domain Beta-Ig-H3/fasciclin (InterPro:IPR000782) Range:  from: 18749614    to: 18751185    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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