Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <------ZmHOX2a(2)                  <---------GLK1(1)                --------->ARR11(3)          <---------ANAC58       <---------ANAC58                     <---------ANAC58 <---------At4g35610       <---------ANAC58                <---------At4g35610   --------->At4g35610      <---------HSFC1(2)             --------->ATHB12   <----------DOF2                             -      --------->HSFC1(2)      ---------->DOF2 <---------MYB52(1) --------->REM1(1)                  < --------->DOF2 <---------ARR11(3)  <-------TEIL  <------ZmHOX2a(1)                         <------NtERF2 ---->GT1      --------->GLK1(1)   --------->GLK1(2)--------->GLK1(1)                 <-----------RAV1(2)   aaaaaagaagcttgcagagatcaatttttctctaaagattcagtggccgtgaggaattctttcagcttcaacatatgctctaatcttctcaggcagggag  18676700                                                                     <---------ZAT14                                                                     --------->ZAT14           <---------ANAC58       ===============bZIP_DOF            --------->ZAT18           <---------ANAC58       --------->TGA1a                   <---------ZAT6       <----------DOF2            ===============bZIP_DOF         <---------ANAC46       =====================================bZIP_DOF          <---------At4g35610                   - --------->YAB1                   <---------TGA1a             --------->At4g35610                   < <---------ICU4                ----------->HVH21             <---------ANAC46             <---------WRKY12 -------->HAHB4       ---------->DOF2           ---------->DOF2 --------->ZAT18         <-----------HVH21 -------->ICU4        ======================bZIP_DOF      --------->ALFIN1        --------->HSFB2a(2) ---------ATHB12   --------->AtLEC2   <----------DOF2   <---------MYB46(3)        <---------HSFB2a(2)   taatgatgcctttgctcgtccatggaaagtcatgggacgtcttttatcgataaatcggttgtggagcggagtgttctgtagcttcgaggcggtcagagat  18676800               --------->ARR11(3)       --------->WRKY18(1)      <-----------HVH21                                     <------ZmHOX2a(1)     --------->LBD16           <---------ATHB12       <---------At4g35610   <---------LBD16            ------>MYB46(1)    <---------ZAT14 <---------ARR14(2)           ------>MYB83  <---------GLK1(2) -------->GLK1(1)           --------->AtMYB61--------->GLK1(2) ---------GLK1(1) --------->ALFIN1   <-----------HVH21--------->At4g35610                        ----   ggatttccggtcaagaagatgtggagaagaccaatcgattgtcacagagtctgttctgctaaggagttttcaaatggatttgaagaaaaatggcaggctt  18676900                                                                                               ------                                                                                               <-----               <------MYB46(1)                                                               --------               <------MYB83                                                                --------->AHL20(1)            <-------GAMYB                                                                  <---------AHL20(2)           --------->MYB111(1)                                                             --------->AHL20(2)           --------->MYB55(2)            --------------->AGL15                            --------->AHL20(2)           --------->MYB111(2)          <-----------------AGL2                       ----------->GT1           <---------MYB46(3)           <-----------------AGL1                       <----------ID1       <---------TOE1(3)                ----------------->AGL1--------->DAG2        ----------->GT1       <---------TOE2(3)                <-----------------AG ---------->DOF2        -----------------   <----------DOF2               ------->TEIL         --------->AHL20(2)          --------->DAG2 ----->ATHB12 <---------AtMYB61 <---------CCA1(2)   <----------DOF2              ---------->DOF2   cattgttttaaggttgttggtctcaaatccatttgtatctttgcccattttgggctttaaatgaaaagttgttcgacgaaaaaaaaagggaaaaaaatta  18677000           --------->DAG2          ---------->DOF2    --------->TOE2(3)   <---------ANAC55(2)              --------->ANAC58   ----------->GT1                  --------->ANAC58                   --------->ZAT14 --->AHL20(2)       --------->ARR14(2)     ----------->GT1        --------->MYB46(3) ----AHL20(2)       <---------ARR14(2)   --------->ICU4       --------->WRKY12 ---------------->ANAC81    ------>ZmHOX2a(2)               <-------GAMYB            --------->YAB1 ------->ANAC81     --------->ICU4  --------->ANAC46       <---------ANAC46        *TSS<-----------GT1   aaaaaacgtaaaaaaagttgcaaatatggatcgaactcacgacattagtaaaatttagatgtcgttgaaccactagactactgagaattatacgattttt  18677100                                                                           --------->ATHB12                                                                           --------->YAB1                                                                           <---------ICU4                                                                           <--------ATHB1                                                                          <---------ATHB12          <                                                                          <---------YAB1            -                                                                          --------->ICU4   ----------                                                                        --------->YAB1     <---------ANAC46                                                                     ----------->RAV1(1)  --------->RAP2.3(1)                                                                    --------->DEAR3(1)    <------NtERF2                                                                   --------->ATERF1(1)   <---------ATERF1(1)                                                                   <------NtERF2         <---------ERF1                                                                  <---------RAP2.3(1)    ------>NtERF2                                                                  ------>NtERF2          <---------ORA47(2)                                                                 <---------PCF2          <---------RAP2.3(1)                                                                 <---------ANAC46        <---------DEAR4(2)                                                                 >>>>>>>>>>E2Fa         <---------RAP2.6(2)                                                                --------->RAP2.3(1)     <---------DEAR3(1)                                                               <---------ATERF1(1)      <---------RAP2.3(3)           --------->AHL20(2)                               <-----------RAV1(1)         <---------RAP2.3(2)           <---------AHL20(2)                   --------->YAB1--------->ALFIN1         <---------ORA47(1)    <---------ATHB12              ----------->GT1   --------->TOE2(3)------>NtERF2     <---------ABI4(1)   aatccaatagtttttaaatattgattcaacgatagggagttaaaagactttcatcgttatatatgtggcgccaacaatgatttcatttgggcggcgtaaa  18677200     <---------MYB46(3)   <------NtERF2  --------->LBD16                                                                                 <--  ------>NtERF2                                                                                   <--  <---------ATERF1(1)                                      <---------DOF5.7(2)                <------ <---------ATERF1(2)                                     <---------MYB52(1)                <XXXXXXXXX --------->DEAR3(1)                                      --------->DOF5.7(2)               <XXXXXXXXX --------->ATERF1(2)                                 <---------DOF5.7(2)                 <---------SPL7 <---------DEAR3(1)           --------->ZAT14        <---------At5g28300               --------->RAP2.6(3) ---------LBD16   --------->ZAT14                <---------MYB46(3)                  --------->GLK1(1) -------->ATERF1(1)           <---------ZAT14   <---------TOE2(3)                    <---------GLK1(1) ->GT1<-------GAMYB    --------->ANAC46   <------NtERF2 <-------GAMYB       <------ZmHOX2a(1)--------   tcgccggcgattgaagaaacttcactcgcgacttcagtcatggaggcatggaggttaccgttatcgccttcgattagaggaaaactgatatcggccggtt  18677300                                                                                             <-------                                                                                             <------- -------YAB1                    <---------At4g35610                                          <------- ---------GT1           <---------CCA1(2)                                            --------->ARR14(2) -GAMYB           <---------ANAC58              --------->At5g28300    --------->TOE2(3)<-----------RAV1(1) XXXXXXXXXXXMIR169B/C <---------ANAC58         ----------->GT1   --------->TOE2(3)   <---------ARR14(2) XXXXXXXXXXXMIR169A   <---------ANAC58------>ZmHOX2a(2)     <---------DAG2           --------->GLK1(2) --->GT1          <---------ANAC58  --------->ARR11(3)      <----------DOF2         <---------GLK1(2)   atacttgtctgtcttcgattgcttccgtctcttcttctgatctcgctcgaggtaaatttctgctttaccctaatcttagaagattagaatctgttgctcg  18677400                                                    <---------ICU4                               ----                                 --------->ATHB12  <---------YAB1                           <--------     <---------YAB1       --------->TOE2(3)        --------->ICU4                           ---------   --------------->AGL15 --------->ANAC46       ----------->GT1                             --------- --ANAC58             --------->ZAT14          <--------P<---------TOE2(3)                 <---------LBD16 --ANAC58             <---------ZAT18         <-------GAMYB                      <---------TOE2(3)<-- --ANAC46             <---------ZAT14     ------>ZmHOX2a(1)                      <---------TOE1(3)<--   tttttctctgattagcacagacagtacacctcaattgattagtccttgggttgataattagggttctatttagtctcttgtttaaggcttatttctggaa  18677500                                                 <---------ANAC46                                   -                                                 <---------ANAC58                                   - ----->ICU4                                      <---------ANAC58                            -------- -HSFB2a(2)                                    <------MYB83                                 --------- >HSFC1(1)                                    <---------AtMYB61                             <-------- >HSFB2a(2)                                  <---------MYB52(1)                           <---------TOE2(3) -------ICU4                       <----------DOF2 --------->ALFIN1             <------ZmHOX2a(1)   < ------ATHB1                     <---------YAB1<------MYB46(1)<-------TEIL   <------ZmHOX2a(1)      <   taattctatatatgtgtgtgtgtgtgttttgagtcatctttgatatcgttggtgtgtgagtagatgcaaatatcacagaggaggaagcatttgagatttt  18677600  Previous    Next  AGI:  At2g45270.1    Description:  glycoprotease M22 family protein. similar to glycoprotease M22 family protein [Arabidopsis thaliana] (TAIR:AT4G22720.2); similar to glycoprotease M22 family protein [Arabidopsis thaliana] (TAIR:AT4G22720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24527.1); contains InterPro domain Peptidase M22, glycoprotease; (InterPro:IPR000905); contains InterPro domain Peptidase M22, O-sialoglycoprotein endopeptidase; (InterPro:IPR009180) Range:  from: 18673600    to: 18676947    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g45280.1    Description:  ATRAD51C (Arabidopsis thaliana Ras Associated with Diabetes protein 51C); ATP binding / damaged DNA binding. Identical to DNA repair protein RAD51 homolog 3 (RAD51C) [Arabidopsis Thaliana] (GB:Q8GXF0;GB:O22144;GB:Q8RY30;GB:Q93X07;GB:Q9FT75;GB:Q9FT80); similar to ATDMC1 (RECA-LIKE GENE), ATP binding / DNA-dependent ATPase/ damaged DNA binding [Arabidopsis thaliana] (TAIR:AT3G22880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24528.1); contains InterPro domain DNA repair Rad51/transcription factor NusA, alpha-helical; (InterPro:IPR010995); contains InterPro domain RecA bacterial DNA recombination; (InterPro:IPR001553); contai Range:  from: 18677083    to: 18679351    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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