Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ------>MYB46(1)                        ------>MYB83                      <---------MYB111(2)                      <---------MYB46(2)                      --------->AtMYB61                                 ------>ZmHOX2a(1) -->MYB46(1)          <---------MYB55(2)                              ----------->RAV1(2) -->MYB83             <---------MYB111(1)                      ------>MYB83 -----ALFIN1          --------->MYB46(3)                       ------>MYB46(1) ->GAMYB             --------->ANAC46                        --------->TOE2(3) ->ANAC46         --------->MYB46(3)      ------>ZmHOX2a(1)  <---------MYB59  --------->AHL20(2)   acttggtagcatacttgaaaaccaccaaaccaatttgtattctcctaatctctctaattcaaacctaatttctcctgcaaaaaaatgtcttagaatcaaa  18673100                                               <---------HSFB2a(2)                                               --------->HSFB2a(2)                                              ------>ZmHOX2a(2)                                             --------->GLK1(1)                                             <------ZmHOX2a(2)                                     --                                            --------->ARR11(3)                                     <-                                            <---------ARR14(2)                                     <-                                            --------->AGP1  <---------YAB1                         --                                            <---------AGP1--------->YAB1                          --- --------->HSFB2a(2)                        <---------ARR11(3)                                    <-- <---------HSFB2a(2)                        --------->ARR14(2)--------->WOX13(1)         ----------->GT1   cttgtggaacagaagaagactcaatttgaaacattttgtgtttacagatctcgaagtgaattatcattcaaatgaaatctagctatggaaaatgtaaaaa  18673200                         --------->ETT(2)                         <---------ETT(2)                     ------>ZmHOX2a(2)                     <----------DOF2                   --------->ARR14(3)                   --------->ANAC58               ---------->DOF2                          --------->ANAC58            --------->TOE2(3)  <---------ZAT6      --------->ZAT18            --------->TOE1(3) >>>>>>>>>TAC1    --------->DAG2     <-----------GT1<------ZmHOX2a(2)         ---------->DOF2                   <-------GAMYB ------->AHL20(1)  <---------ARR11(3)     --------->LBD16  <---------DAG2      <---------MYB46(3)  <- --------AHL20(1)  --------->ARR11(3)    --------->HSFB2a(2)                --------->MYB52(2)------- --------AHL20(2)  --------->ARR14(2)    <---------HSFB2a(2)           <---------TOE2(3)    --------- ------->AHL20(2)  <---------ARR14(3)    <---------------AGL15         <---------TOE1(3)    <-------- ------>AHL20(2)   <---------ARR14(2)    --------------->AGL15         --------->MYB59 --------->WOX13(1) -------AHL20(2)  --------->RVE1(1)     ----------------->AGL3 <-----------GT1<---------TOE2(3)  ----   ataaatttcacaaaccctaaagatctttcgacagtgttcatttccagataaagttcacaagctttttgcaatttaggtttgtggttagacaatcagctgt  18673300                                                                --------->ALFIN1                                                             --------->LBD16    <---------AHL20(2)                                     <------NtERF2   --------->AHL20(2)                              --------->ARR14(2)   <---------AHL20(2)                         ----------->RAV1(2)                                   - --------YAB1                              <------ZmHOX2a(2)<---------ANAC58                       -- ---->GT1                                 <---------ARR11(3)<---------ANAC46                       <- >At4g35610                               --------->ARR11(3)<---------ANAC58                     ---- -At4g35610         ---------->DOF2 ---------->DOF2<---------ARR14(2)                    --------->LBD16 ----->YAB1 ------->TEIL   <------ZmHOX2a(2)  --------->At4g35610           <-----------GT1      ----   tataatttaatctgaatctagagaaagagatcgaaaactaaagagatcacctggatttggctccgtgtgtgtgtttattcactattcagaccggagaaca  18673400            --------->LBD16           --------->DEAR3(1)          <---------LBD16          <------NtERF2          --------->ATERF1(1)         <---------ATERF1(1)        <---------DEAR3(1)                                                      --------->ARR14(2)        <---------ETT(2)                                                        <---------ARR14(2)        --------->ETT(2)                                                     --------->ANAC58       --------->SPL7                                                        --------->ANAC58       --------->ATERF1(1)                                              <---------------AtSPL3      <---------ATERF1(1)                                         --------->HSFC1(1)      <-----------HVH21      <---------REM1(1)                    <---------HSFB2a(2)            <---  <---------ANAC46           ----------->HVH21                    --------->HSFB2a(2)   --------->DAG2  --------->ANAC55(2)        --------->ALFIN1                <---------DAG2--------->MYB52(1)   <---- -------->CCA1(2)        <------NtERF2                       <----------DOF2<-----------------AGL1<-- ------->ARR14(2)       --------->LBD16                   <-----------GT1 <---------ZAT14      <----- --------ARR14(2)     <---------LBD16              ---------->TaMYB80<------ZmHOX2a(1) ---------->DOF2 ----->ANAC58   --------->ARR11(3)              ----------->GT1   <---------HSFC1(1)   *TSS    ------ ----->ANAC58<------NtERF2<---------DEAR3(1) ---------->DOF2 <---------------AGL15  ----------->GT1   agttacgcggtcgccggagatttagccggaggtgaaggaaatacagagaaaggtatatacttacttttctaggaagtgaacggaaatggtaaagctcatt  18673500                                           ----------->GT1                                     --------->YAB1                                  --------->WOX13(1)                      --------->LBD16          -- <-----------GT1                <---------MYB59                     <---------AHL20(2)             -- ------AHL20(1)                 ------------>CBF               <---------YAB1                      <- -----ICU4<---------ANAC46     --------->ANAC58             <---------ARR14(2)      <------NtERF2  <- -------YAB1      --------->TOE2(3) <---------ATHB12        --------->ARR14(2)      ------------>CBF*TSS ----YAB1 <---------ANAC58     --------->ANAC58       <-----------GT1   <---------LBD16        ------ --->ICU4 <---------ANAC58   <------ZmHOX2a(1)      <---------AHL20(2)<-----------GT1          ------   atttttctacttgcttaaaacctctaaaccaggacccaatcactatggtcaaatttaaaccggttctgatttaaaccggattaggctgcaatccaaacct  18673600                 <---------ZAT2          <---------ZAT18          <---------ZAT14          <---------At4g35610                  ----------->GT1          --------->ZAT14                      <---------ANAC46        XXXXXXXXXXXXXXXXXXXXX>MIR830*          <------MYB83                       --------->LBD16       --------->At4g35610  <---------ANAC58  <---------DEAR3(1)                  ------>NtERF2 ------->At4g35610          <---------ANAC58  --------->MYB46(2)                 <---------DEAR3(1) ------->ZAT2    --------->At4g35610          --------->MYB52(2)                <---------LBD16     < --------ZAT2    --------->ZAT2               <---------MYB46(3)           <----------DOF2  --------- --------At4g35610       <-----------GT1    <---------MYB52(1)      <---------ANAC58      <---------LBD16 --->TOE2(3)     <---------At4g35610  <----------DOF2     <-------TEIL<-----------GT1  --------->GLK1(1) --->TOE1(3) --------->ANAC46   <----------DOF2<------MYB46(1)      <---------ANAC58   <---------GLK1(1)   cagctcatcttctgcacacagctcaagtttccgtctttctctttcggttcggtgaaatggttcgtctgtttcttacactttctccggcgatttcccgatt  18673700                                               <---------At4g35610             --------->GLK1(2)                 --------->At4g35610            <---------GLK1(2)        <--------ATHB1           <------ZmHOX2a(1)         --------->YAB1         --------->LBD16             <---------ICU4                                           <------  <----------DOF2                    -------->HAHB4                        --------->AtMYB61 -------- --------->YAB1                     <---------ATHB51               --------->TOE1(3)------>NtERF2 <---------ICU4                     --------->ICU4                 --------->TOE2(3)<---------ALFIN1 ---------ATHB12                    <---------YAB1                ----------->GT1  --------->LBD16 >LBD16 <---------LBD16           --------->YAB1                  --------->At4g35610  <----------DOF2   caatctttatccaggaatctctattctagcgagaaataataattctctcagattacaaaaacaccataagcttaaaaccaaaaccccgactttctcgtta  18673800                                      <---------YAB1                                  ------->MYC3                        --------------->AGL15               --------->ANAC46   <-------MYC3                        <---------------AGL15               --------->ANAC58  --------->ANAC58                    <-----------------AGL1       --------->REM1(1)         --------->ANAC55(2)                -------->P                    <--     ------>ZmHOX2a(1)       <------ZmHOX2a(1)                    ------>ZmHOX2a(1)             ----- ---MYB52(1)   --------->ANAC58  --------->ANAC58              ------>ZmHOX2a(1)               <----- ->TOE2(3)<---------ICU4 ---------->DOF2                <---------GLK1(2)---------->DOF2    <--------   atctctccttcatcttcacccaattttcaaaggacacgtttttattctaccgaaacaagaatttcctccttaccctatagcgaaaacccgaattttgatg  18673900                                               <---------At4g35610                                             <------NtERF2                                             <-----------RAV1(2)                                            ------>NtERF2                                     <---------ALFIN1                                   ------>NtERF2                                  --------->O2 <---------ZAT2                                  --------->ANAC58                                  ----------->HVH21     <---------ANAC58             --------->ANAC46     <-------GAMYB                --------->bZIP60(2)     <---------ANAC58             --------->bZIP60(1)    <------MYB83                  <---------bZIP60(1)    <------MYB46(1)               --------->ANAC58                                    <---------ANAC58   --------->MYB59         <---------At4g35610 --------->At4g35610           <<<<<<<<<TBF1 -------YAB1               --------->ZAT2   --------->LBD16             <----------DOF2 <---------ZAT6 ---->YAB1  <---------ANAC46   ----------->HVH21 <---------MYB46(3)    <---------DAG2 <---------ANAC46 ----YAB1  <---------LBD16 --------->At4g35610 --------->ZAT2 <---------MYB52(1)      <---------ANAC58 -YAB1 <---------MYB46(3)  <---------ZAT2   <---------At4g35610     <-----------GT1  ---------->ID1   ataatttggttgttctgggtattgaaacgagctgcgacgacactgccgcagctgttgtaagtccgtttaatcacctttcttcttcttgtcgtgttaactt  18674000  Previous    Next  AGI:  At2g45260.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24521.1); contains InterPro domain Protein of unknown function DUF641, plant (InterPro:IPR006943) Range:  from: 18671604    to: 18673487    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g45270.1    Description:  glycoprotease M22 family protein. similar to glycoprotease M22 family protein [Arabidopsis thaliana] (TAIR:AT4G22720.2); similar to glycoprotease M22 family protein [Arabidopsis thaliana] (TAIR:AT4G22720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24527.1); contains InterPro domain Peptidase M22, glycoprotease; (InterPro:IPR000905); contains InterPro domain Peptidase M22, O-sialoglycoprotein endopeptidase; (InterPro:IPR009180) Range:  from: 18673600    to: 18676947    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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