Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)                                                 --------->ARR11(3)                              --------->ARR14(2) <---------ARR11(3)                              <---------ARR14(2) <---------AGP1                <---------ALFIN1                             <---------CCA1(2)   --------->AGP1                ----------->RAV1(1)                          <------ZmHOX2a(2)     <---------CCA1(2)           ------->GAMYB                          ===========================HOX2a_HOX2a            --------->ANAC46   <------ZmHOX2a(2)     <---------ARR11(3)   --------->HSFB2a(2)          --------->MYB46(3) >ANAC58                 --------->ARR11(3)   ------>ZmHOX2a(1)        <---------MYB52(2) >ANAC58        <---------ANAC46  ----------->RAV1(1)    <-----------GT1  -------->P               --   tggcgatcaaattcaattcggtgaagagatcatatccaacattgattcctagatctatatcacattacagactactaacccccacattcagatagtagac  18646500                                                                              ------->GAMYB              --------->ANAC58                                                --------->DEAR3(1)              --------->ANAC58                                               --------->MYB46(3)              --------->ANAC46                                               --------->DEAR3(2)   ---            ---------->DOF2                                                 ------->TEIL          <--     ----------->RAV1(1)                                                   --------->MYB52(1)    ----  --------->ANAC46               ---------->DOF2                         <---------MYB52(2)     <----  ------->GAMYB              ---------->DOF2                ---------->DOF2--------->ARR14(2) <------ ------->MYB52(1)   ----------->GT1                  ---------->DOF2>>>>>>>>>TBF1          ----------   ataacagcaacattcaaagcaatggaaataacaaagaaagacacagatagcatgatcaagcggaaaggaagaagaacgaaccgccttgagtaaacctggc  18646600                                   ------>ZmHOX2a(2)                                  <------ZmHOX2a(2)                                  <---------GLK1(1)                                        <------ZmHOX2a(2)        <---------ANAC58          --------->GLK1(1)                                       --------->ARR11(3)        <---------ANAC58         <---------AGP1                                           --------->AGP1   <---------ANAC58              <---------ARR14(2)                                       <---------ARR14(2)   <---------ANAC58              --------->ARR11(3)                              --------->GLK1(2)  --------->ZAT2                 --------->ARR14(2)                             --------->ARR14(2)  <---------ZAT2                 <---------ARR11(3)        ------>NtERF2        <---------ARR14(2) ------>ATERF1(1)               <---------CCA1(2)          --------->LBD16      <---------GLK1(2) ----NtERF2                   <---------HSFB2a(2)         --------->ANAC46 ------>MYB83  --------->At4g35610 -->NtERF2                    --------->HSFB2a(2)   --------->At4g35610    -------->P    <---------At4g35610 -----ANAC46            --------->MYB52(1)          --------->ZAT2<---------ARR11(3) ------>ZmHOX2a(1) ---ATERF1(1)         <----------DOF2          <-----------GT1    --------->ARR11(3) =============HOX2a_HOX2a ->RAV1(2)          --------->At4g35610------>ZmHOX2a(1) <---------LBD16   ------>MYB46(1)--------->ARR14(2)   gcctagcttagcgtaagaagagagcttaacgtctagatctccttcaattttacgagcttcccgcctaagttcttcccaaccagattcctgcagatccaga  18646700                                                                                --------->MYB46(3)                                                                           --------->At5g28300                                                                           --------->LBD16                                                                        ------>NtERF2                                                                        --------->LBD16                                                                       <---------ALFIN1                                                                       --------->DEAR3(1)                                  <------ZmHOX2a(2)                   <---------LBD16      <---------ZAT2                                <---------At4g35610                  <---------ATERF1(1)   <---------At4g35610                 --------->ARR11(3)                                 --------->ARR14(2)     --------->ZAT2                 <---------ARR11(3)                                 <---------ARR14(2)     --------->At4g35610                 <---------ARR14(2)                                <---------ZAT2          --------->GLK1(1)                 --------->ARR14(2)                                --------->At4g35610   <------NtERF2             <-----------GT1    --------->At4g35610                <---------At4g35610  --------->LBD16  --------->GLK1(2)------>ZmHOX2a(2)             <---------MYB52(1)--------->ZAT2     <---------LBD16 <---------GLK1(2)<------ZmHOX2a(2)    --------->ARR14(2)   --------->ZAT6<---------ANAC46 <---------GLK1(1)   ctcgattctgtcattttccgatcttcaacaattcagatcagtaacctctccgttcttagataactctccagctccgccgtgaaccaatgccggagctctc  18646800              <---------GLK1(2)                      <---------ARR14(2)                --------->ZAT14           ------>ZmHOX2a(2)                         --------->ARR14(2)              --------->ANAC46          <------ZmHOX2a(2)                          <-----------ARR10            *TSS <---------ZAT14         <---------ARR11(3)                         <------ZmHOX2a(1)         <----------DOF2         <---------ARR14(2)                ----------->HVH21                <---------At4g35610         --------->ARR11(3)                ----------->TGA1              ------>ZmHOX2a(1)         --------->ARR14(2)          --------->TOE1(2) =========================HOX2a_HOX2a     ------->GAMYB                  --------->MYB46(3) ------>ZmHOX2a(2)<---------ALFIN1<---------ALFIN1   agtacaacgacgatctgattctcactgaaactgatggaaccagcgatgacgagaggatcgcatccctcttccctcctccgcttcttcgctccactggtga  18646900                        <------------CBF                       --------->ATHB51                <------------CBF                       --------->ATHB12               --------->ATHB12                 <----------DOF2                      --------->ATHB51              <---------YAB1  -              <------ZmHOX2a(1)                      <---------YAB1              --------->AHL20(2) <         <---------ATHB12    <---------At4g35610<----------DOF2              ------->TEIL  <---------At4g35610   <----------DOF2    <---------YAB1          ------->TEIL  <---------At4g35610<----------DOF2     --   tgggccttttaatcaaggacttttattattgggctcaccatagtcatggacttttattattgggctcaccatagtcatggacttttaatattgggctcac  18647000                                                                                                   <-                                                                                                   <-                                                                                                 ----                                                                                                 <---                                                                            ---------->DOF2  <-------TEIL                                                                        --------->TOE2(3)  ------->MYC3                                                                       ----------->GT1     ------->MYC2            --------->AHL20(2)                                        <---------TOE1(3)    <-------MYC2          <----------DOF2                                             <---------TOE2(3)    <-------MYC3 -------->YAB1                        --------->YAB1                ----------->TGA1      --------->ANAC58 ---------ICU4                <---------TOE1(3)                     --------->WRKY12 ----------->HVH21 ------->ICU4  <---------YAB1 <---------TOE2(3)       <---------ZAT18<---------DOF5.7(2)  --------->ANAC58   aataatcagggacttttaatattgggcttattaaggcttatagtaagcctgaattgggctctcgattaagttgacgttaaaagccgagtgacacgttcgt  18647100              ----------->GT1             --------->ANAC58             --------->ANAC46             --------->ANAC58            <---------LBD16            --------->SPL7            --------->SPL1(2)           --------->SPL1(1)          <---------ZAT14          --------->ZAT14          <---------SPL7        <---------------AtSPL3       <------------------SPL14     --------->ZAT18        --------->At4g35610    --------->ANAC58     <---------At4g35610    --------->ANAC58     --------->At4g35610    --------->ANAC46     <---------ZAT2                                              <---------YAB1   ------->TEIL         ------->TEIL                                             <-----------------AGL1 --------------AtSPL3--------->ANAC46                  --------->ALFIN1     <---------YAB1 --------------AtSPL8--------->ANAC58               <-----------------------TaNAC69(2)       -------- ----->ARR14(2)      --------->ANAC58     --------->AHL20(2)            <----------DOF2    ---------- ------ARR14(2) --------->ARR14(2)        <---------AHL20(2)    --------->MYB46(3) ------>ZmHOX2a(1)   atatgtacgcactgtacggaaacacgaagctgatgagttgggatttatataagagaagtgtttggaacaaacttctttctgattcctattatcgaaaggt  18647200  <---------ATHB12                    <----------DOF2 ->DAG2              <---------YAB1<---------YAB1                                    ----------->GT1 >DOF2    ---------->ID1 <---------LBD16       <---------At4g35610           <---------AHL20(2)   ccaaatcaatttgttttttttttgtgattcggaaattgtgcttaacttcaactcatagtttttgctcatatatagctaatttaacttgggttaatagaaa  18647300                                                           <---------ANAC46                                                          <---------MYB46(3)                                                       <---------ZAT2                                                       --------->ZAT2<---------ARR14(2)                                                       ----------->RAV1(2)                                             --------->ARR14(2)      --------->ARR14(2)                                             <---------ARR14(2)     <---------CCA1(2)                                             --------->ARR11(3) <-----------HVH21                                             <---------ARR11(3) <---------PCF2                                             <---------ARR14(3)<------MYB46(1)                                             --------->ARR14(3)<------MYB83                                 --------->ANAC58      <---------At4g35610                                 --------->ANAC58      --------->At4g35610                                 --------->ANAC46    <-----------RAV1(2)   <---------ICU4                                 <---------ANAC55(2) --------->MYB46(3)   --------->ICU4                       <---------AHL20(2)    <-----------ARR10<---------MYB46(3)       <-----------GT1          ---------->DOF2   --------->YAB1  <---------CCA1(2) --------->MYB55(2)------->TEIL     ----------->GT1 --------->AHL20(2)     --------->GLK1(1)--------->ALFIN1<---------YAB1  <-------   cagggatgggcaaaaagaaacatatatatatgatcacgaaaaacgaatatcttcaccagctgggtgggtcatatccattatgaacgtttaaacgtctttt  18647400  Previous    Next  AGI:  At2g45200.1    Description:  GOS12 (GOLGI SNARE 12); SNARE binding. Identical to Golgi SNARE 12 protein (GOS12) [Arabidopsis Thaliana] (GB:O22151); similar to GOS11 (GOLGI SNARE 11), SNARE binding [Arabidopsis thaliana] (TAIR:AT1G15880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24511.1); contains InterPro domain Vesicle transport v-SNARE; (InterPro:IPR007705) Range:  from: 18644577    to: 18646882    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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