Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      ------>ZmHOX2a(2)                                   --------->CCA1(2)                                   <------ZmHOX2a(2)                                  <---------ARR11(3)                                  --------->ARR14(2)                                  --------->ARR11(3)                                  <---------AGP1                                  <---------ARR14(2)                                  --------->GLK1(2)                                  --------->ARR14(3)                         >>>>>>>>>ARR2         --------->ANAC58                         >>>>>>>>>ARR1         --------->ANAC58   <---------DAG2                       <---------YAB1  ----------->HVH21          <----------DOF2                       <---------TOE2(3)--------->REM1(2)        --------->TOE2(3)          =================================HOX2a_HOX2a        <-----------GT1                  ------          ------>ZmHOX2a(1)       <---------ARR14(3)        <-----------HVH21            <---------ANAC58          ================================HOX2a_HOX2a ---------->DOF2        <----------DOF2   <----- -------YAB1 --------->ZAT14    ----------->ARR10  <---------HSFB2a(2)<---------YAB1     <---------ANAC58   ttcattcttatcctctgtaggcgataagattgtgaagatctgtgaaggcaagtctcgaaagttgtcacctttatgtttcctttggaatttgtcttgtctc  18615200                          <---------ARR14(2)                   ----------->GT1            --------->ATHB12                                                      ----------->GT1           <---------YAB1 --------->ARR11(3)                                  --------->bZIP60(1)         --------->CCA1(2)--------->GLK1(2)                                   <---------bZIP60(1)  ---------->DOF2 <---------WOX13(1)                                     --------->CCA1(2) ---------- --->HSFB2a(2)  --------->ATHB12<---------ARR14(2)                  ---------->DOF2      <---------YAB1 ----HSFB2a(2)<---------WOX13(1)--------->ARR14(2)              <----------DOF2 <--------------------   gaaacaaagagatttgattgattgttaaaatctggattcgattttgtattttgcagagtatggctactttgaaagaaatgaggtcagtaatatcaaagct  18615300                                                                                                 <---                            <---------TGA2(1)                                                    <---                            <---------bZIP60(1)                                                  <---                         ----------->HVH21                                                   <-------                       <---------At4g35610                                                   <-------                       --------->ZAT2                                                        <-------                       --------->At4g35610                                          ---------->DOF2                      <---------AGP1                                                --------->YAB1             --------->HSFB2a(2)                                                   <---------ATHB12 <             <---------HSFB2a(2)          <---------LBD16                      ------------>CBF <---- >DOF2    --------->ARR14(2)--------->bZIP60(1)---------->TaMYB80   <---------ARR14(2)      <-------TEIL -WRI1    <---------ARR14(2)--------->TGA2(1)<------ZmHOX2a(1)      --------->ARR14(2)     --------->ALFIN1   aaaaacattcagggtctggaactagagctgacatcagagcgtcttcaggaatatgacttcaactctatcaaatccacttgtttcaataaagaggtgcgtg  18615400 <---------ANAC58 <---------ANAC58 <---------ANAC46 ------ANAC58                                    <---------ANAC58                               ----- ------ANAC46                                <---------ANAC58                        <------ZmHOX2a(2) ------ANAC58       <---------TOE2(3)        <---------ANAC58                 <------------CBF ------ --ANAC46          >>>>>>>>>WRKY18           <---------ANAC46      <------------CBF <---------ARR14(2) --ANAC58 --------->ANAC55(2)            <---------ANAC58         --------->ATHB12  <---------ARR11(3) --ANAC58 --------->ANAC46               <---------ANAC58        <---------YAB1     --------->ARR14(2) -------TEIL    <------------CBF       <---------YAB1   <----------DOF2 <---------ZAT6------>ZmHOX2a(2) ---TEIL<---------YAB1         <-----------GT1   <---------ANAC58<---------MYB52(1) --------->ARR11(3)   cgtgcgtgttataagtaacattgacgaaaattttcacgattttgcttgcttgcttactcttttactcgttattggtgttagattgggatcttgtataagc  18615500                                                         --------->ZAT14                                                         <---------ZAT18                                                         <---------ZAT14                                          <-----------HVH21          <---------MYB52(1)                                   <---------ATHB12      --------->ZAT18     ----------->GT1              <-----------ARR10    <---------At4g35610                    <------ ---->TOE1(3)              <---------GLK1(1)           --------->At4g35610         --------->ZAT14 --->At4g35610             --------->GLK1(1)  ------>ZmHOX2a(1)    <---------ZAT6--------->At5g28300<   ttaagtatggggaaataggtgctaagttgatatccaaatcatcccgtcctatggctcagttcactggtactgttagacacctcggtaaactctctggttt  18615600                                                                                 --------->ANAC58                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                            --------->ANAC46                                      --------->ANAC58                    <---------AtLEC2                                      --------->ANAC58                   --------->ZAT14  <---------ZAT14                            --------->MYB52(1)              <---------At4g35610  --------->ANAC58 ---                            <---------DOF5.7(2)     <---------ANAC58     <---------ZAT14  --------->ZAT14 ---ANAC46                --------->DOF5.7(2)       <---------ANAC58----------------------->TaNAC69(2) ---------GLK1(1)<---------YAB1------->GAMYB        <---------ANAC46<---------YAB1        <---------ZAT18   ggaactcacttccatgagtattgttgacattaacggacacaagctcgataagtggcatgttgggctcactctcattgcagggaacgcctctgtgcagatt  18615700          <---------ZAT6     --------->MYB52(2)   <---------MYB52(1)                                      <---------ANAC46   <--------P                                           <---------ANAC46  <-------GAMYB                        <---------HSFB2a(2) ----------->GT1  --------->At5g28300            --------------->AGL15  <---------ANAC58 <---------MYB46(3)           <---------ALFIN1          <---------ANAC58         ------>ZmHOX2a(1) ----------->GT1   --------->TOE2(3)   --------->HSFB2a(2)--------->ALFIN1   <-----------GT1 --------->MYB.PH3(1)       ------>ZmHOX2a(1)   --------->YAB1      <---------YAB1 <----------DOF2 <-   agacggttagtagttttaaaacgttgattcctccacctcttatagaacaataagcattgtgtggtgaattctgaatatgtttcctctttgcagagaggct  18615800                   --------->LBD16                   ------>NtERF2                  --------->ANAC58                  --------->ANAC58                  --------->ANAC46                             <------ZmHOX2a(2)               -------->P                                      <---------ZAT14              <-----------GT1                                 <---------ARR11(3)       <---------MYB52(1)                               --------->At4g35610                       <--    <-------TEIL --------->MYB46(3)                     --------->ZAT2                         <-----   --------->CCA1(2)                                    <---------ZAT2                      <--------   --------->ARR14(1)              --------->LBD16      <---------At4g35610          --------->ZAT6  --------->ARR11(1)              --------->LBD16     <---------ZAT14             <---------CCA1(2)  --------->ARR14(2)              --------->ANAC46    --------->ZAT14         <---------ANAC46-------  <---------ARR14(2)    --------->YAB1     <-----------RAV1(1)--------->ARR11(3) ---------->TaMYB80 - --------WOX13(1)------->GAMYB<-----------GT1  <---------At4g35610         <-----------RAV1(1)<------   gatagatacgttgtttcaacccgccatcatattcacccgagatttgtgtcgctcactgagctgagatcactgtatttctggcgcatatcactcccgtcca  18615900                                                                                         --------->ANAC58                                                                                         --------->ANAC58                                                                                      <---------ZAT18                                                                                  <-----------RAV1(1)                                                                                  --------->ALFIN1 ---------RAV1(1)                                                          --------->TOE1(2) ----ALFIN1                                                                ------->GAMYB --------->ANAC46 ---HVH21                         --------->YAB1             --------->ARR14(2)   <---------ZAT6 -->ZAT14 <---------ARR14(2)      <------ZmHOX2a(1)          <---------ARR14(2)--------->LBD16 -------->ALFIN1              --------->TOE1(2)    <---------AtMYB61       --------->TOE2(2)     <--- ---ZAT14 --------->ARR14(2)--------->ZAT6      --------->ALFIN1          --------->MYB46(3)    <----   ctgtggcgatgggattcgagttcgagcttaaccctaggataactcttgaagtgatggtctccgaatcccatcttcaacctccgagtgttgcactccaata  18616000                                                                       <---------ANAC58                                                                       <---------ANAC46                                                                  <----------DOF2                                                               --------->ARR14(2)         <---------ANAC58                                                               <---------ARR14(2)         <---------ANAC58                                                               <---------ARR11(3)         <---------ANAC46                                                               ------->TEIL   ---------->ID1                                       <---------ANAC46     <---------ANAC46<---------ANAC58                                <---------At5g28300       ----------->GT1   <---------ANAC58 ------YAB1                   <---------ARR14(2)     --------->AHL20(2)<---------ANAC58<----------DOF2 -----ARR11(3)                <---------ZAT14--------->ANAC46 <---------CCA1(2)  ------>ZmHOX2a(1)   tcaatgttcaagggctcagtgtctcattagagtttacggtgatgtctactccaaaaaaaatggtgtatcttttgcgtttcgtccttcttctttcgtctag  18616100  Previous    Next  AGI:  At2g45135.1    Description:  protein binding / zinc ion binding. contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 18615551    to: 18617504    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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