Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             <-------TEIL                                                <-----------GT1          <-----------GT1                                              <---------AHL20(2)      <---------TOE1(2)    <---------YAB1                        --------->YAB1            --------->DAG2      <---------TOE2(2) <-------TEIL   --------->ANAC55(2) --------->TOE2(3)              ---------->DOF2 --YAB1--------->MYB52(2)--------->YAB1<---------ANAC55(2)--------->At4g35610       <-----------GT1   tgctctcgtaagttacatttcatcgattcataatagacattacatattttgtttaatattagcttaatagtatttacatttgttttttaccaaaaagttt  18606200                                                                  <---------WRKY18(1)                                                                 --------->WRKY45                                      <---------ARR11(3)         --------->WRKY12                                      --------->ARR11(3)         --------->WRKY38(1)                                   <---------AHL20(2)         <---------MYB46(3)                                   --------->AHL20(2)      ------->TEIL                                  --------->AHL20(2)    <---------ANAC55(2)                                  --------->YAB1        --------->ANAC55(2)                                  <---------AHL20(2)  --------->CCA1(2)                              <---------AHL20(2)     --------->ARR11(1)                              <---------YAB1         <---------ARR11(3)              ----------->GT1 --------->AHL20(2)     <---------ARR14(2)           --------->YAB1    <---------AHL20(1)      --------->ARR11(3)      <---------YAB1         --------->AHL20(1)      --------->ARR14(2)                        ------  <<<<<<<<<<<<WRKY18         --------->AHL20(2)    ----------->ARR10                    <----------DOF2   agtcaattgtcaatggtagtaaatataccaatataattaaaatcttatataagaagatatgtatttgttgaccaaaaaatgatgctatttctttaccaaa  18606300                    --------->AHL20(1)                    --------->AHL20(2)                    <---------AHL20(2)                    <---------AHL20(1)               <---------YAB1            <---------ARR11(3)            --------------->AGL15          --------->ANAC58                <---------MYB59                                          <-          --------->ANAC58          --------->WOX13(1)        --------->YAB1            <---------TOE2(3)  <---------YAB1 --------->YAB1   <---------ATHB12          --------->GLK1(2) <----------DOF2 <------ ---->DOF2----------->GT1  <----------DOF2<---------------AGL15        ------->TEIL    ---------->DOF2   agtttttatagcaagttattaataaattactttgaaatcaattaccaaaatttgttcaacacaatcttgaatgcatttatcttttagactaaagttttac  18606400                                                                                                -----                                --------->ARR14(2)                                              =====                                <---------ARR14(2)       <-------TEIL                       <--------   <-----------GT1             <------ZmHOX2a(1)        --------->CCA1(2)                   <-------- ---------DOF2    <----------DOF2           <---------WRKY18(1)<---------GLK1(2)    ------------>CBF -----GT1     <-----------GT1  <-----------------------TaNAC69(2)<-------TEIL      <-----------GT1   tcttttcacttcaaatttacctttcatgtaagaggattggagagtttgacctccatagatacaaagattcacttatattgcaaatatacaatttccttga  18606500          ==================================================bZIP_DOF          <---------O2          --------->TGA1a                                                                         <--          <---------TGA1a               --------->YAB1                                     ----------          <---------ANAC46             <---------YAB1                                  <----------DOF2          --------->O2                 ----------->TBP                                --------->TOE2(3) ----->DOF2       <---------ZAT6     --------->YAB1          <---------At4g35610      <-------------- ===================bZIP_DOF        <---------YAB1       <-----------HVH21  *TSS      --------------- -ANAC58 <------NtERF2         <-----------GT1        <----------DOF2------->TEIL   --------->ARR11(3) -ANAC58<-----------HVH21--------->AHL20(2)      ---------->DOF2  <---------ATHB12  <---------ARR11(3)   aagttgaacgcgtcgtgagagtgttcaaaaaataaaccattataaaaactaaaaagctttgtcatctaatgaatcaaattcacaaatacctttaaaagag  18606600                                                                <---------CCA1(1)                                                                <---------RVE1(1)                                                               --------->ARR11(3)                                                               <---------ARR11(3)                                                               <---------AHL20(1)                                                               --------->AHL20(1)                                                     --------->YAB1  ---------->DOF2                                    <---------ICU4 -------ZAT14    --------->ANAC46                 --------->bZIP60(1)              <----------DOF2 >DOF2         <-----------GT1                    <---------bZIP60(1)           <---------ARR11(3) -AGL15  <------MYB83  ---------->DOF2 --------->CCA1(2)      --------->YAB1 ------>ZmHOX2a(1) >AGL15  <------MYB46(1)              <---------ARR11(3)   ---------->DOF2  --------------------->WRI1   tatagaaagcttggtttatacaaaacaaagtatatagctagatatatcaatggcatcatcacaaagatatttcgctctcctagctcttttcgcagtctca  18606700                                                                                           <---------ABI4(2)                                                                                        <---------MYB52(1)                                                                                       <---------DEAR3(2)                                                                                      <---------ATERF1(2)                                                      --------->LBD16                 --------->ATERF1(2)                                                     --------->DEAR3(1)              --------->RAP2.3(1)                                                    <---------LBD16                  <------NtERF2  -                                                   --------->MYB52(1)                --------->ATERF1(1)                                                 <---------ABI4(2)                  <---------RRTF1(1)                                                 --------->ATERF1(1)                <---------RAP2.3(1)                                                 --------->DEAR3(2)                 <---------ATERF1(1)                                                <---------ATERF1(1)                 <---------ERF1  <                                               <---------ARR14(2)                   <---------RAP2.6(1)                                            --------->HSFB2a(2)                     ------>NtERF2   -                                            <---------HSFB2a(2)                    <---------DEAR3(1)                                           <---------LBD16                         --------->DEAR3(1)                                           ------>ZmHOX2a(2) <---------ANAC46      <---------RAP2.3(2)                                         <---------ARR14(2)  <---------ANAC58     --------->RAP2.3(1)                                         --------->ARR14(2)  <---------ANAC58     --------->ATERF1(1)                                    <---------ZAT2--------->DEAR3(1)             <---------ATERF1(1)-                                   ------->TEIL--------->ARR14(2)                <---------ORA47(2) -               --------------->AGL15--------->ZAT2------->GAMYB  <---------SPL7 <---------DEAR3(1) --               <---------------AGL15<---------At4g35610     <-----------------------TaNAC69(2)   <---              ----------------->AGL1--------->At4g35610<------NtERF2  --------->At5g28300<--------P<-        <---------YAB1          <---------REM1(1)--------->MYB46(3)--------->SPL7<---------RAP2.3(1)-   ctaaaattttgttattgccaaaatgagactatagatgtagctggatcgggaaccgccggagttacttggtacggtgaaccattcggcgccggtagcaccg  18606800             <---------ANAC55(2)                                                                    <       --------->AHL20(1)                                                                         <--      --------->AHL20(2)                                                                          ---      --------->YAB1                                                                            ----- -------->ANAC58                                                                              ------- ---------ANAC55(2)                                                                           <------ -------->ANAC55(1)                                                                         --------- -------->ANAC55(2)                         --------------->AGL15                           <-------- ---------->GT1              --------->AHL20(2)                --------->AHL20(2)         <---------AHL20(2) ------->SPL7--------->ANAC55(2)  <-------TEIL                 <---------AHL20(2)         --------->AHL20(2) ------MYB52(1)             <---------ARR11(3)            <-------TEIL                  --------->AHL20(2) ------TEIL<-----------GT1  <---------AHL20(1)     ----------->GT1              <---------ANAC46<---- -------->ANAC58            --------->AHL20(1)     --------->YAB1     <---------YAB1    <---------AHL20(2)   gtacgtaataatattacatatttctaacaatatatatacataaattcttagaatagtaaattcatttatatgatgcttaaatgtgtgtatatatatatat  18606900                                           ------>NtERF2                                       <---------DEAR3(1)                                  <---------ARR14(2)                              <-------TEIL <---------MYB46(3)                              --------->SPL7                            <---------ARR14(2)                    <---------AtMYB61                            <---------PCF2--------->ALFIN1   --------->ANAC58                          <---------------AtSPL8             --------->ANAC58 ---------AHL20(2)        <---------MYB46(3)<------NtERF2 --------->ZAT14 -------AHL20(2)         <---------ANAC46--------->At5g28300 --------->ANAC46 ------>AHL20(2)      <----------DOF2 <---------LBD16     <---------ARR14(2)  <------NtERF2 ---->AHL20(2)       <---------ANAC58 --------->LBD16     --------->ARR14(2) --------->LBD16 -->AHL20(2)         <---------ANAC58<---------ANAC46 --------->AtMYB61    <---------LBD16 ---AHL20(2)      <------ZmHOX2a(1) <---------LBD16   <---------ALFIN1    --------->At4g35610 >AHL20(2) --------->REM1(2)<---------SPL7<---------DEAR3(1) --------->ANAC55(2) -AHL20(2)--------->ALFIN1<---------------AtSPL3   --------->ANAC46<---------MYB46(3)------>ZmHOX2a(1) -----AHL20(2) <------ZmHOX2a(1)  --------->ARR14(2) --------->MYB46(3)   <---------At4g35610   atatatatgtgtgtgtaggaggagcttgtgggtacggttccgcggtggctaatccaccactatacgcgatggtttcagccggaggtccttcgctgttcaa  18607000                                      ------->TEIL                                   <---------YAB1                                               <----                                  <---------TOE1(2)                                         <--------                               <---------ANAC58                                          <---------YAB1            --------->ALFIN1   <---------ANAC46                   <---------AHL20(1) <---------DAG2 -        <------ZmHOX2a(1)      <---------ANAC58             ----------->GT1          <----------DOF2<    ---------->DOF2           <-------TEIL------->TEIL      --------->YAB1         --------->At4g35610   caatggaaaaggatgtggaacatgttatcaggttcgtatgaatgtatatagggcaagagcgattgtaatatatgtattgttgatcagctttattaatgct  18607100  Previous    Next  AGI:  At2g45110.1    Description:  ATEXPB4 (ARABIDOPSIS THALIANA EXPANSIN B4). Identical to Expansin-B4 precursor (EXPB4) [Arabidopsis Thaliana] (GB:Q9SHD1;GB:Q84WA9); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G65681.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70608.1); contains InterPro domain Expansin 45, endoglucanase-like (InterPro:IPR007112); contains InterPro domain Rare lipoprotein A (InterPro:IPR005132); contains InterPro domain Major pollen allergen Lol pI; (InterPro:IPR005795); contains InterPro domain Expansin/Lol pI; (InterPro:IPR007118); contains InterPro domain Pollen allergen/expansin, C-terminal (InterPro:IPR007117); contain Range:  from: 18606576    to: 18608414    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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