Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        <---------At4g35610                                              <---------AHL20(2)        ---------->DOF2                                              <---------YAB1   <---------TOE2(3)                                           --------->ARR11(3) --------->MYB52(1)  --------->LBD16                          <---------ARR11(3) <---------DOF5.7(2) ------->GAMYB                            --------->YAB1   --------->At4g35610 ---------LBD16                          <---------YAB1    <---------At4g35610 ------>P  --------->KAN4(1)     --------->TOE2(3)    --------->At4g35610                   --------- ------->MYB52(1)                --------->TOE1(3)    ----------->RAV1(2)   <---------GLK1(2)   -----   caaccggagtagattattcactaaaattttaaaaacctaaaatatgatattatttcaactgagctaacgaaaatgaaagaatttcgacattgaatgagaa  18598300                                           --------->ANAC58                                           --------->ANAC46                                           --------->ANAC58                             <----------DOF2                                           --------->bZIP60(2)                     ---------->DOF2                                     --------->MYB46(3)                          --------->MYB46(3)                                   <-----------GT1                              ------>MYB46(1)                              <---------AHL20(2)                                ------>MYB83     ----------->GT1        <---------AHL20(2)            <-------GAMYB        ----------->RAV1(1) >YAB1                     <---------AHL20(1)            <------MYB83        --------->MYB46(3) ---->GLK1(2)              <---------ARR11(3)            <------MYB46(1)<---------AHL20(2)   tcgaaaatggaaaaaacaaattgacaccatatatttttgaccaccaagtcactaccatttggttgagcttgtatttaaaaccaacaaaagcttttaagaa  18598400                                                         --------->ANAC58                                        --------->AHL20(2)                                        --------->AHL20(1)                                        <---------AHL20(2) ---------->DOF2             <---------ANAC58                                       <---------AHL20(2)--------->ANAC46              <---------ANAC55(2)                                   --------->ICU4    --------->HSFB2a(2)               <---------ANAC58                      --------------->AGL15    <---------------AGL15                   <---------ANAC46                      <---------------AGL15    <----------DOF2                         --------->ANAC55(2)                      =========================================MADS_MADS               <---------ANAC55(1)                      <---------YAB1   --------->AHL20(2)--------->ANAC58           <---------MYB52(1)             --------->TOE2(3)<------MYB83     <---------DAG2          --------->ARR14(2)            ----------->GT1   <------MYB46(1) <---------ANAC58         <---------ARR14(2)      --------->HSFB2a(2)     ----------->GT1 <---------ANAC58     <-------TEIL <-------TEIL      <---------HSFB2a(2)    --------->MYB111(1)     <---------HSFB2a(2)       --------->CCA1(2)   cagactttctaaaaacgtttatttctaatagtaggtgaaaattaaattgctttatctagacgaaagagattcaaatctgagatacagttacgtttcaaaa  18598500                        <-------MYC3                        <-------MYC2                                 --------->ANAC46               <---------TOE1(2)                                   <---------ALFIN1            <---------ANAC58                            --------->ZAT14            <---------ANAC58                            <---------ZAT18  <---------ZAT14            <---------ANAC46  <---------YAB1        --------------->AtSPL3         <----------DOF2------->MYC2                --------------->AtSPL8   --------->TOE1(3)    <-------PIF5         <---------AHL20(2)    --------->ANAC58               ---   --------->TOE2(3)    ------->PIF5        --------->AHL20(2)     --------->ANAC58             -----  ----------->RAV1(2)   ------->MYC3    <---------YAB1  <---------ZAT14  --------->ZAT14       <-----   taaaacctgaactttcgtagtttgcacgagctatgtttgaatactattaaatattcagtacacacacacacacactatagttagtagtaacttataaaca  18598600                                                     --------->ANAC58                                                     --------->ANAC58                                           <---------ALFIN1                                         ----------------->AGL1                                         <-----------------AGL1                                 <------ZmHOX2a(1) ---------->DOF2 ------>AHL20(2)             --------->ALFIN1 <------------CBF                         <---------AHL20(2) ---->TOE2(3)      ---------->DOF2  --------->HSFC1(2)                                 ----------->TBP ----ICU4         --------->AHL20(2)<---------HSFC1(2)                 ------>ZmHOX2a(1)  ---------->DOF2   ttaaacaaaaacattttcaaataaagaagaggtgaggaagttgccctacattggaaagctactcttctccatcctcttgactactgtatataaaaagcct  18598700                                                                                               <-----                                                                                              <------                                                                                        <---------At4g35610                                                                                        --------->ZAT2                                                                                        --------->HSFC1(2)                                                                                        <---------HSFC1(2)                                                                       <---------------------WRI1                                                                --------->GLK1(1)       <---------HSFB2a(1)                                                                <---------GLK1(1)       --------->HSFB2a(1)                                                               --------->ARR14(2)       <---------ZAT2                              <----------DOF2           <------ZmHOX2a(2)               --------->At4g35610                          <---------CCA1(2)             <---------ATHB12           --------->ANAC46                 <---------YAB1            ---------->DOF2     <---------GLK1(2)   --------->ANAC58        <----------DOF2<---------YAB1   *TSS--------->DAG2     <---------ARR14(2)  --------->ANAC58   ctcaaaacctctttccattttcattctcatttctttaaactcccataaagtttctccgatcaatggattccctagcgatttctccaaggaagctccgatc  18598800                                                                         --------->TOE1(2)                                                                        =========================HOX2a_HOX2a                                                                <---------CCA1(2)                                                              --------->TGA1a    <----------DOF2                                                              ==============================bZIP_DOF                                 <---------ALFIN1             --------->O2     ------->TEIL -ZmHOX2a(2)                   ----------->RAV1(1)     --------->ZAT14  ------>ZmHOX2a(2)           - -----HVH21             <---------YAB1           ----------------------->TaNAC69(2)       <------ZmHOX2a(1)   agacctctactcttactcttaccaagatgattccaacacagtacctctagtcatctctgttctctcgtctctgatcgaacgaactttagctaggaacgag  18598900                                           <---------ANAC58                                           <---------ANAC58                                          --------->ATHB12                                         <---------YAB1                                  ------->MYC2                                  -------->ABF1                                  ------->MYC4                                  <-------MYC4             --------->LBD16                                  <-------MYC2       <---------HSFB2a(1)                                 --------->O2        --------->HSFB2a(1)                                 --------->ANAC55(2) --------->HSFC1(2)                  <---------MYB46(3)   <----------DOF2 --------->GLK1(2)                <---------MYB52(1)------->MYC3    <------NtERF2          <---------ZAT2         <---------O2    --------->LBD16          --------->At4g35610    =================bZIP_DOF ------>ZmHOX2a(1)                      <--          <---------At4g35610    <---------TGA1a ------>NtERF2                                   ----          --------->ZAT2         <---------ANAC55(2) <---------HSFC1(2)                        <-----        <------NtERF2            <--------ABF1  <---------LBD16                            <---------HSFB2a(1)       --------->LBD16           --------->TGA1a<---------ANAC46                           <---------HSFC1(2)     <---------LBD16        --------->ANAC58   <---------LBD16              --------->YAB1<---------KAN4(2)    --------->At4g35610     --------->ANAC58<---------WOX13(1)             <---------ATHB12--------->HSFB2a(1) -------->GLK1(2)<---------AtMYB61<-------MYC3 <---------ANAC46          --------->WOX13(1)--------->HSFC1(2)   agaatcagccggagctacggtggttttggtaagacacgtgtctttgattgccgggagattcctgatatgactattcaatcatacctagagagaattttcc  18599000                                 <---------ANAC58                                 <---------ANAC46                            <---------bZIP60(2)            --------->YAB1                            <---------O2             <---------ARR14(2)     ---------->DOF2        <---------ANAC58   <---------WRKY18(1)    --------->AtMYB61       <---------ANAC46  --------->WRKY12   ----------------->AGL1--------->ANAC46     ----------->HVH21<---------KAN4(2) -------MYB52(1)     <----------DOF2       >>>>>>>>>EIN3 <-----------HVH21 ----->LBD16  <-------TEIL  <---------ANAC58  --------->WRKY38(1)     <---------TOE2(3)          <--- ----LBD16 <---------DEAR3(2)    <---------ANAC58    --------->ARR14(2)         --------->GLK1(2)----   ggtataccaaagccggtccatcggtttacgtcgtggcttatgtatacattgaccggttctgtcagaataaccaaggtttcagaatcagtcttaccaatgt  18599100                                                              <-----------GT1                                                --------->CCA1(2)                                               --------->ARR11(3)                        <---------ICU4         --------->ARR11(1)                                <---                       --------->ICU4          <---------ARR14(2)                             ------>ZmHOX2a(1)                       <---------YAB1    <---------------------WRI1                       <---------ARR14(2)                     --------->YAB1   <-------TEIL<---------ANAC55(2)                     --------->ARR11(3)        ==========================HOX2a_HOX2a  <---------ARR11(3)--------->TOE1(3)        <---------ARR11(3)        ------>ZmHOX2a(1)           --------->ARR14(2)    --------->AHL20(2)              --------->ARR14(2) ----TEIL           <---------YAB1  <---------ARR14(2) ----------->GT1    ---------->DOF2--------->RVE1(1) --->TEIL   --------->YAB1 ------>ZmHOX2a(2)   --------->ARR14(2)--------->TOE2(3)   --------->AHL20(2)   acatcgtctccttatcacaactatcatgatcgcttccaaatacgtcgaagatatgtaagttaaattaccttcaaaacaaagtttgaataaaaaatcctct  18599200  Previous    Next  AGI:  At2g45080.1    Description:  CYCP3;1 (cyclin p3;1); cyclin-dependent protein kinase. Identical to Cyclin-U2-1 (CYCU2-1) [Arabidopsis Thaliana] (GB:Q9SHD3); similar to CYCP3,2 (cyclin p3,2), cyclin-dependent protein kinase [Arabidopsis thaliana] (TAIR:AT3G60550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70609.1); contains InterPro domain Cyclin (InterPro:IPR006670); contains InterPro domain Cyclin-related 2 (InterPro:IPR013922); contains InterPro domain Cyclin-like (InterPro:IPR011028); contains InterPro domain Negative regulatory factor PREG (InterPro:IPR012389) Range:  from: 18598740    to: 18599530    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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