Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <---------ICU4                    --------------->AtSPL8    --------------->AtSPL8          <---------ANAC58    --------------->AtSPL3 <---------ANAC55(2)                               --------->ANAC58   <---------ATHB12        ----------->GT1                                   --------->ANAC58 -----At4g35610          --------->YAB1                                      --------->ANAC55(1) ---->At4g35610          <---------ICU4                                      <---------ANAC55(2) -->SPL7                <---------ATHB12         ------>ZmHOX2a(1)           --------->ANAC55(2) --MYB52(1)     <---------TOE1(3)   <---------ANAC58               <---------ARR11(3) >LBD16         <---------TOE2(3) <---------AHL20(2)     <--------P--------->ARR11(3)   ctcaaatcagtacaaattcaggtttaatcatgtaaattacttggtacaatcctgttctggttagcaagagttcttagaaacgtaattgaaaaaacttgtt  18594900                                                  --------->ARR14(1)                                                  --------->CCA1(2)                                                 --------->ARR14(2)                                                 <---------ARR14(2)                                                 --------->ARR11(1)                                       <------ZmHOX2a(1)                                      --------->LBD16                                    <---------LBD16<-------TEIL                                    <-----------RAV1(2)                             <-------TEIL       <---------HSFC1(2)                          <---------At4g35610   <---------HSFB2a(1)                          --------->At4g35610   --------->HSFB2a(1)                          --------->ZAT2        --------->HSFC1(2)                          <--------                          <---------ZAT2       ----------->ARR10                   <---------At4g35610   tcaatttgacatatactatatgagtttgagctgcattttcaggagatggaagattcgaaactctcaaacgcagaaaactaatttcagcatcgagtcaaca  18595000                     ------>ZmHOX2a(1)                    --------->TOE2(3)                   --------->YAB1             --------->ANAC58                           --------->AtLEC2                   ------->TEIL          <---------REM1(1)                             --------->ANAC58                  <---------AtLEC2        --------->At4g35610                             --------->ANAC58         <---------At4g35610 -WRKY38(1)  --------->ANAC58                  --------->DAG2  --------->GLK1(2) --------->At4g35610   aaactaaattagatgaagcaatcctaaaattctcaaatcagcgagacaaaaattgaacatgcaaaattctatgtaaaattctcagatgctatgcatgttg  18595100                                                                            --------->ANAC46                                                                   ------>ZmHOX2a(2)                                                                  --------->CCA1(2)                                                                  <------ZmHOX2a(2)                                                                 --------->ARR14(2)                                                                 --------->ARR11(3)            --------->HSFB2a(2)                                  <-----------ARR10           ------>ZmHOX2a(2)  ------>NtERF2                      --------->AGP1                     -           <---------LBD16    --------->LBD16                    <---------ARR14(2)                 =          <------ZmHOX2a(2)  --------->RAP2.6(2)                 <---------AGP1   <---------At4g35610         <---------ARR14(2)<---------ZAT2                        <---------ARR11(3)                ==         --------->ARR14(2)--------->At4g35610                  <---------CCA1(2) --------->At4g35610     <-----------------AGL2------>MYB46(1)            ------>ZmHOX2a(2)     --------->ANAC58       <-     <-----------------AGL1--------->ZAT2           --------->ARR11(3)      --------->ANAC58      ---     ----------------->AGL1------>MYB83  <-------TEIL<------ZmHOX2a(2)    <---------ALFIN1        <--   <---------ARR14(2)     --------->MYB55(1)        <---------ARR14(3)--------->ANAC58            ---   --------->ARR14(2)     --------->ANAC46          --------->ARR14(3)--------->ANAC46            ---  <---------CCA1(2)      --------->MYB46(3)         <---------ARR11(3)--------->ANAC58            <--   aatcgtatccagatcgggaatcgtataccagccgcgattcagattcaacatcgagatctcattttcagatctacgcacacgctcatctaacaaatccata  18595200                          <------ZmHOX2a(2)                          --------->CCA1(2)                         --------->ARR11(3)                         --------->AGP1                         <---------ARR14(2)                         <---------ARR11(3)                         --------->ARR14(2)                        <---------GLK1(1)                                      <---------ARR14(2)                        --------->GLK1(1)                                      <---------GLK1(2)              --------->WOX13(1)                                               --------->ARR14(2)           --------->TOE2(3)                                                   --------->ARR11(3)  -------->P------>ZmHOX2a(1)                                             --------->MYB52(1) ----->ZmHOX2a(2)    ------->GAMYB                                       ----------->HVH21 ==================HOX2a_HOX2a   --------->YAB1                   <---------GLK1(2) ==================HOX2a_HOX2a <---------ARR11(3)             <-----------------AG -----ZmHOX2a(2)  ----------->RAV1(1)   ----------->RAV1(1)   <---------At4g35610 ------>ARR14(2)  --------->MYB52(1)   <----------ID1         --------->At4g35610        <----------ID1 -------AGP1===========================HOX2a_HOX2a            <-----------------AGL1  ----------->TGA1 ------>AGP1=====================HOX2a_HOX2a  --------->YAB1  ----------->RAV1(2)  <---------YAB1 ------>ARR11(3) --------->YAB1--------->ARR11(3)    --------->MYB52(1)--------->At4g35610 -------ARR11(3)<---------ATHB12<------ZmHOX2a(2)   ---------->DOF2    <---------At4g35610   gatctaccaatttcctcaatcaacagagatccagatcataaacaacaaaaataacaaagggctcacctgattcggctaacagattttgatgacgacgaga  18595300                                                                                       <---------CCA1(2)                                                                                      ------->TEIL                                                                                   --------->ANAC58                                                                                   --------->ANAC46                                                                                   --------->ANAC58                                                                                 --------->DEAR3(1)               ----------->ARR10     <---------WRKY18(1)                      --------->ANAC46          <---------ANAC46          ----------->HVH21                         --------->ANAC58        --------->MYB52(1)          --------->WRKY12                    --------->HSFC1(2)       ----------->HVH21            --------->WRKY45                    <---------HSFB2a(1)       ----------->TGA1           --------->At4g35610               ----------->GT1<---------ALFIN1     <---------ANAC58             *TSS                          <------ZmHOX2a(1)<---------ALFIN1     --------->ANAC55(2)          <---------At4g35610     <---------YAB1--------->HSFB2a(1)     <---------ANAC55(2)     <---------LBD16             --------->AHL20(2)   --------->ANAC58     <---------ANAC58      <----------DOF2         ------------>CBF----------->GT1------>NtERF2    <-------TEIL  --------->CCA1(2) --------->WRKY38(1)  <-----------TBP<---------HSFC1(2)   gaacgattcgtgacggagagatttgaagactttcggagttgaccggactcttcaacaatttttataggaggggaaatttctcgccacgcatctcttaatg  18595400                                       <---------At4g35610                     --------->AtMYB61 --------->At4g35610                    <---------ZAT2     <---------ZAT14                    --------->bZIP60(2)<---------ZAT2                    --------->O2       --------->ZAT2                    ==============MYC_MYB                    --------->TGA1a--------->YAB1                  <---------ALFIN1<---------YAB1        --------->AHL20(2)      <---------ICU4        --------->YAB1         --------->ICU4        <---------ANAC58       <---------ATHB12  --------->At4g35610         <---------ANAC58                             <--     --------->WOX13(1)---------->CDC5 --------->ZAT14     --------->ALFIN1   ---------->DOF2     ---   ------------>CBF------>NtERF2--------->YAB1      <-------TEIL             <---------AHL20(2)   <--   cattagccaattaaaaaatgccacctcagcgtaattatcagagctgtgtttacatgcgtaagtgggagagataacttatttaaagcccaaatattaaggc  18595500                                                                                  ----------->RAV1(1)                                                                                 --------->TGA1a                                                                                 ====================                                                                                 ----------->HVH21                                                                                 --------->ANAC46                                                                                 --------->ANAC58                                                                      ------->GAMYB               <---------AHL20(2)                                     =====================MYC_MYB               --------->AHL20(2)                                    <---------MYB111(2)              --------->AHL20(2)          <---------------AtSPL8     --------->MYB46(3) ---------RAV1(2)                  <---------ANAC55(2)    --------->AHL20(2)     --------->ANAC58 ------>HSFB2a(2)                  <---------ANAC46       <---------AHL20(2)    --------->SPL7 ------ -------HSFB2a(2)         --------->At4g35610 <-------TEIL--------->YAB1 <---------DAG2     ---------   ccagaagaagcccaaattaaaatgtattagcagcattacgcgtacaagtacatatatcatttatattgtcaacaacctttcgcacgacagagaattaaaa  18595600               <---------AHL20(2)       --------->At4g35610                        <---------WOX13(1)                --------->TOE1(2)       <---------At4g35610    ---------->DOF2   --------->ATHB12                 <-----------HVH21      --------->MYB52(2)  <----------ID1     ---------->DOF2   --------->YAB1   <------MYB83    ----- =====bZIP_DOF--------->AHL20(2)         ------->TEIL<---------ANAC58           <------MYB46(1) ----- ---->DOF2    --------->AHL20(1)  <---------ARR11(3) <---------ANAC58 <----------DOF2           <---- >AHL20(2)    <---------AHL20(1)  --------->ARR11(3)--------->ATHB12  <---------DAG2<---------SPL7   agaaatgttagctgaatataatgaagtagggacaaagttcttgaatctaaagattgattgtgtaatcatatactttatttgtaggtcatacgagaacaaa  18595700                            <---------TOE2(3)                              --------->ANAC46         -                          <---------AHL20(2)                               --------->ANAC58         -                         --------->AHL20(2)                           <---------ARR11(3)            -                  --------->ANAC58                                    --------->GLK1(2)     ---------                  --------->ANAC46                                    <-----------ARR10     --------- ---->ARR14(2)    --------->ANAC58            <---------YAB1    <------ZmHOX2a(1)           <-------- ---->GLK1(2)     --------->AtLEC2     <----------DOF2         <----------ID1              --------->RVE1(1) -----ARR14(2)<-----------GT1--------->ICU4<----------DOF2  ---------->DOF2--------->ANAC58--------->CCA1(1)   tctgaaatgtgtgattttacaggcaaaattaatgtttatgactttcttttgattccctaaatcaaaggacaaaatctaagccagataaacaaaatatctt  18595800  Previous    Next  AGI:  At2g45070.1    Description:  SEC61 BETA (suppressors of secretion-defective 61 Beta); protein transporter. Identical to Protein transport protein Sec61 subunit beta [Arabidopsis Thaliana] (GB:P38389); similar to sec61beta family protein [Arabidopsis thaliana] (TAIR:AT3G60540.2); similar to sec61beta family protein [Arabidopsis thaliana] (TAIR:AT3G60540.1); similar to unknown [Populus trichocarpa] (GB:ABK95043.1); contains InterPro domain Preprotein translocase Sec, Sec61-beta subunit, eukarya (InterPro:IPR016482); contains InterPro domain Preprotein translocase Sec, Sec61-beta subunit (InterPro:IPR005609) Range:  from: 18594157    to: 18595334    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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