Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <---------AHL20(2)                                         --------->YAB1                                        <---------YAB1                                       <-----------GT1                                      --------->YAB1                                      <---------ICU4                                     <---------ATHB12         ----------->GT1             --------->ICU4 ------ZmHOX2a(1)                  --------->WOX13(1)                               --------->At4g35610 --------RAV1(2)                  --------->AHL20(2)                       --------->ZAT18         <- ---GLK1(1)                      <---------ATHB12       <-----------GT1    <---------ZAT18         --   caggagaatgaaggtgaaacatacaatattagctaatcaattatcatttttttttttttttcaaaatcaactcatggtgaactagcagttgaaagttagt  18589500      ----------->GT1      --------->AtLEC2    <---------ANAC46                 <-----------GT1 ----------->HVH21               --------->AHL20(2) --------At4g35610     <---------ANAC58                      <-----------GT1 ------->At4g35610     <---------ANAC58          --------->MYB52(2)                        --------->AHL20(2)   catatgacatgtaaaactcgagttttcttgttcgattattttcacttcgattagttggccatataacattgctatatactataaacacataaaaaaaata  18589600                                                        <---------AHL20(2)                                                       <---------AHL20(2)             --------->AHL20(2)                                                       --------->AHL20(2)         ----------->GT1                   --------->ANAC46             ----------->GT1            <-----------GT1               ------>ZmHOX2a(1)            <---------YAB1                 --------->YAB1   tcaaaaacactctattcctccacaaaactcacatagttttgtaactcttatagtgaattaatttgtgtagttcttaataacaatttgtataaatataagt  18589700                            <---------ZAT6                          <---------ANAC46                        --------->ZAT14                                  <-----------GT1                        --------->REM1(2)                      <-------TEIL                        --                      --------->LBD16                       <------MYB46(1)--------->ZAT6       -----                     <---------ANAC58                       <------MYB83<-----------GT1        ------                     <---------ANAC58                      --------->MYB111(1)              >>>>>>>>>GATA-1                     <---------ANAC55(1)                   --------->MYB46(2)         <---------YAB1          --------->ZAT6<---------ZAT14                    <---------MYB46(3)      --------------->AGL15    --------->ZAT6   <---------ANAC46                     <---------MYB55(1)       <---------------AGL15   gagtttacactaactctattcatccgtgtagtataagtttttgaacatttcaatagctcagtaggtgcaaagttttaactctcttcttcttatagataaa  18589800                                                                                       ------->MYC3                                                                                       <-------MYC2                                                                                       <-------MYC4                                                                   <---------AtLEC2    ------->PIF5                       ---------->DOF2                          --------->At5g28300    <-------PIF5       --------->AHL20(2)                                     --------->ANAC46         <-------MYC3       <---------AHL20(2)                             <-----------HVH21                ------->MYC2    ----------->GT1--------->AHL20(2)                <------MYB46(1)                  --------->ANAC58    --------->YAB1<---------AHL20(2)       --------->MYB59 ----------->HVH21          --------->ANAC58 ------->ALFIN1   --------->AHL20(2)       <---------TOE2(3)--------->MYB52(1)       ------->TEIL ---->DAG2 --------->AHL20(2)      ----------->GT1   <---------DEAR3(2)            <---------ZAT14 ---->DOF2 <---------AHL20(2)    <---------ZAT14     <------MYB83 <-------TEIL     --------->ZAT14   agtggatgataaattaaaaaataaataaagaagagagaagtgaataaggtcgagtcggtcactcacggtgcatggtcactctctctgcacgttctcttgc  18589900                                        <-----------HVH21                                       --------->ANAC46                          ---------->DOF2            <---------MYB52(1)      -------->P *TSS      ---------->DOF2       <---------GLK1(2)   cctctctctctctcgttatctcccctattaaagactctaaccagtcacacagagagtgagaaagagagagagacagagtcagagtcttcgtctgcaagag  18590000                   --------->GLK1(2)               <---------ICU4               --------->YAB1              <---------ATHB12                       <---------At4g35610            --------->WOX13(1)                <-----------ARR10                    --------->ATHB12          <---------ATHB12                 <---------ANAC58               ------>NtERF2         --------->ANAC58                  <---------ANAC46              --------->DEAR3(1)         --------->ANAC58        ------->TEIL<---------CCA1(2)       --------->DEAR3(2)         --------->ANAC46--------->YAB1    <---------ANAC58--------------------->WRI1<---------GLK1(1)   agaacaataccactcaatcataatctataacaatggacgtctatggcttatcttcaccagacttacttcgaatcgacgaccttcttgatttctccaacga  18590100                                      <---------MYB52(1)                                     <---------At4g35610                                    --------->RAP2.3(2)                                    --------->RAP2.6(2)                                    --------->DEAR3(1)                                    --------->RRTF1(3)                                  --------->ABI4(1)                                  ------>NtERF2                                 --------->AtMYB61                                 <---------ALFIN1                                 --------->DREB2C(2)                                 --------->DEAR3(1)                                 ------->GAMYB                                 --------->ANAC46                                --------->MYB46(3)                           <---------ARR14(2)                         --------->ABI4(2)                         <---------MYB46(3)                                                <---------ALFIN1                         --------->MYB55(2)                                             <---------ALFIN1                        --------->ALFIN1                                                --------->AtMYB61                        <---------AtMYB61                                              --------->MYB46(3)                <<<<<<<<<TBF1   --------->DEAR3(2)                                   --------->DEAR3(1)            <----------DOF2--------->ARR14(2)                                        --------->AtMYB61          <---------At4g35610 <---------ALFIN1                    ------>ZmHOX2a(1)  <---------ALFIN1        <---------LBD16<---------MYB52(1)     ------>ZmHOX2a(1)------>ZmHOX2a(1)    --------->MYB46(3) <---------ARR11(3)   --------->LBD16------>NtERF2            <---------ALFIN1    --------->ANAC46 --------->ARR11(3) <---------LBD16--------->RAP2.3(1)<----------DOF2    --------->TOE2(3) --------->AtMYB61   agacatcttctccgcttcttcttccggtggttccaccgccgctacttcctcttcttctttccctcctcctcaaaaccctagtttccaccaccaccatctc  18590200            <---------ICU4            --------->YAB1           <------ZmHOX2a(2)          <---------ANAC58           =================HOX2a_HOX2a           =====================HOX2a_HOX2a           <---------ATHB12   ----------->RAV1(1)        --------->DEAR3(1)   --------->ANAC58      --------->LBD16        --------->ANAC46      <---------At4g35610    --------->bZIP60(2)                              ---------->DOF2      ------>NtERF2        <---------ALFIN1 <---------ANAC46                 --------->YAB1        --     --------->DEAR3(1)  ------>ZmHOX2a(1) <---------LBD16                  <---------ATHB12       <-   ===============HOX2a_HOX2a--------->ANAC58--------->LBD16              --------->WOX13(1)     ----   ------>ZmHOX2a(1) ------>ZmHOX2a(1)<---------ANAC58             <----------DOF2       <----------DOF2   ccttcctccgccgatcatcactccttcctccacgacatttgcgttcccgtataatctctctccctctctctttctccaatcaaagtttcgactttgaaat  18590300                                              --------->ANAC46                                            <---------TGA2(2)                                           ----------->HVH21                                  --------->ZAT14                                  <---------At4g35610                                  --------->ZAT18 <---------At4g35610                                  <---------ZAT14 --------->At4g35610       <---------ANAC58          <---------YAB1       <---------ANAC46   --------->ZAT2            <---------ANAC58 <---------GLK1(2)             <---------ANAC58   <---------ZAT2  <----------DOF2       <----------DOF2 ------->ICU4                  <---------ANAC58  ------->TEIL    <---------ANAC58    --------->GLK1(2) --------YAB1      ---------->ID1 --------->At4g35610            <---------ANAC58   <---------GLK1(2) ------>DOF2     <-----------RAV1(1)       ----------->TGA1 <---------AtLEC2<---------ANAC46<--------   aaagattgtgttttgatttttgttgtattttttgtgtgcagagtgatgacgcagctcatcttgaatggctttcgcaattcgtggacgattctttcgctga  18590400  Previous    Next  AGI:  At2g45050.1    Description:  zinc finger (GATA type) family protein. Identical to GATA transcription factor 2 (GATA2) [Arabidopsis Thaliana] (GB:O49741); similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT3G60530.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70603.1); contains InterPro domain Zinc finger, NHR/GATA-type; (InterPro:IPR013088); contains InterPro domain GATA transcription factor, plant (InterPro:IPR016679); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) Range:  from: 18589947    to: 18591158    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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