Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------ALFIN1                                                                                --------->ANAC46                <----------DOF2                                                 <---------bZIP60(1)         <-----------HVH21                        <---------MYB52(1)            <---------TGA2(1)     <---------TOE2(1)                           <----------DOF2                --------->TGA2(1)     <---------TOE1(1)                  --------->ANAC58                     ----------->TGA1       -   --------->MYB52(1)                   --------->ANAC46                <------MYB83                <  ------->GAMYB <---------DAG2          --------->ANAC58                <------MYB46(1)            <-  --------->TOE1(2)               --------->At4g35610                  <---------MYB46(3)        ---- --------->MYB46(3)               <---------At4g35610                 <--------P--------->bZIP60(1)<- <---------MYB52(2)        <-----------GT1   <---------ALFIN1       --------->ALFIN1           <----- ------->MYB52(1)     <----------DOF2 ---------->DOF2              <------ZmHOX2a(1)      <---------At4g35610   ctaacgaacgaggtcagactttttctttataacttcatctcaaagccactcctttagttttcttgaagaggagttggtgatgacgacacttcatctcctt  18584300                                                                                      <------ZmHOX2a(1)                                                                                     <---------YAB1        <---------YAB1                                                           --------->TOE2(3)     <---------YAB1                                                            ------>MYB83   <-----------GT1                                                             ------>MYB46(1) -------->YAB1                                                                 -------->P ---------ICU4                                                               --------->AtMYB61 --------YAB1                              <---------TOE1(2)          --------->TOE2(3) ----->YAB1     <---------MYB52(1)        ------>ZmHOX2a(1)<---------ANAC58 --------->MYB46(3) --------AHL20(2)             <-----------GT1  ------->TEIL<---------ANAC58>>>>>>>>>>MYB80      ----- -----DOF2 <-----------GT1 <---------MYB46(3) <---------CCA1(2)   <----------DOF2--------->TOE1(3)  -   tataattaccattatacccttcggtttagttgttactcttactcctatgtatctaaattttgcttctccttttcttaaaccaaccttaggatagttttca  18584400                                                           <---------ZAT14                                                           --------->ZAT14                                                       --------->AtMYB61                                                      --------->MYB46(3)                        -----                                                     ------>MYB83                           ---------                                                     ------>MYB46(1)                       <---------ZAT6         <---------YAB1                             --------->ORA47(1) ------>MYB46(1)     ---------- ----->DOF2                                        --------->MYB46(3)  ------>MYB83  <---------------AtSPL8 --------->DOF2   --------->AtMYB61               --------->DEAR3(2)   -------->P    <---------------AtSPL3   aagaaagaaatatgcttaaaccaaaacatttttgagaagacgatggctcgataccgaccactgaagtcgttccaacctcttcaatggatagtactgtaat  18584500                                                                                    <---------ANAC46                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                                                  <---------ANAC58                                                                                  <------MYB83                                                                                  <---------ANAC46                                                                                  <---------ANAC58                                                                                  <------MYB46(1)                                 <---------WRKY38(1)<-----------GT1           --------->ARR14(2)                              ------->GAMYB      <---------AHL20(2)           <---------ARR14(2)                        --------->ANAC46      <---------AHL20(2)          <-----------------AGL3 ----------->GT1        --------->ANAC58      <---------AHL20(1)          <-----------------AGL2 ---->ICU4              --------->ANAC58    <---------AHL20(2)            ----------------->AGL3 >At5g28300  ---------->DOF2 --------->MYB46(3)<---------YAB1           <---------ARR14(2)        <-- ->GT1--------->ICU4  --------->ZAT6 <---------ARR11(3)<----------DOF2  --------->ARR14(2) <---------AtMYB61   ttttggtaatatttcaaaagttcaacactcaacagtcaacatctatattatttttttctttattcaacaagtcgaatccaaatttggtgtgttttggttt  18584600                                         --------->AHL20(2)                                         <---------AHL20(2)                                     <--------HAHB4                                     --------->ATHB12        ------->GAMYB                                     <---------ICU4         --------->MYB46(3)                                    <---------ATHB12       ------>MYB46(1)                                    --------->ICU4         ------>MYB83                           --------->ANAC58                -------->P     ------>MYB46(1)       -----                           --------->ANAC46  --------->MYB52(1)         <---------MYB59   --------->YAB1               <---------ZAT14    --------->YAB1  --------->MYB52(1) <-----------GT1    <-----------TBP   <---------ATHB12        --------->ANAC58  <-----------GT1<---------MYB55(2)      --------->YAB1 -------At4g35610      --------->ANAC46 --------->AHL20(2)<---------ALFIN1------>MYB83 <---------ICU4   agctaatcacttgcgactaaactaaacacaatccactaatcatttaataacgaaacggtccaacccccattaaaccaaactatttttcatatttataaca  18584700                                                                                     --------->ANAC46                         *TSS                                                        --------->ANAC58                   ------------>CBF                                        <---------YAB1            --------->ANAC55(1)                                          --------->YAB1            --------->ANAC58                                             <---------ICU4            --------->ANAC46                                            <---------YAB1            --------->AtLEC2                                           <xxxxxxxxxxxxxxxxxsmallRNA(fl3)          <---------ALFIN1                                            --------->YAB1 --------->AtLEC2         <---------REM1(2)               <---------ARR11(3)      --------->AtLEC2    --------->ANAC58       --------->ANAC46 <---------ARR11(3)                  --------->ANAC46  <---------YAB1 <----------DOF2  --------->TOE2(3)      --------->ARR11(3) --------->ANAC58<---------ICU4 ----->DOF2 --------->ANAC58     <-----------GT1            --------->ANAC58--------->YAB1          <   aagcttttccctccacgcaacttcaatatccaaaataacaaaacatctcttcacttctcatcacaccatgcatcatcatcatcatccatgcaatcgcaaa  18584800                                                                                                   --                                                                                           ==========                                                                                           ==========                                                                                           ------>MYB83                                                                                           -------->P                                                                                           ------>MYB46(1)                                                                                         <---------MYB55(2)                                                                                         <---------MYB59                                                                     <---------GLK1(1)   --------->MYB46(3)                                                  ------>MYB83 --------->ZAT2            <---------MYB111(2)                                                 ----------->RAV1(1) --------->GLK1(1)   --------->AtMYB61        ------->GAMYB                           ------->GAMYB  <---------ZAT2            <---------MYB111(1)       --------->MYB46(3)        --------->TOE2(3)------>MYB46(1) --------->ANAC58      --------->MYB46(3) -----------HVH21 ------>ZmHOX2a(1)            --------->MYB46(3) --------->ANAC58 <-----------GT1 --   cccttcacaaccatcttctccttcttccttctctatctcaatctccataaccaacaaattatcgaagctcgaaatccatctcaatttacgaccaacccat  18584900              <---------LBD16    <---------bZIP60(1)    --------->TGA1a    <---------O2    <---------TGA1a    <---------ANAC58           --------->At4g35610    <---------bZIP60(2)    <-----------HVH21    --------->O2--------->LBD16<---------At4g35610                               <---------ANAC58    --------->bZIP60(1)    <-----------TGA1                                  --------->HSFC1(2)    <---------TGA2(1)     ===============================================bZIP_DOF<---------ANAC58    --------->TGA2(1)     --------->ANAC58          ------>MYB46(1)        <---------------------WRI1    <---------ANAC58      ===========================MYC_MYB              ------>NtERF2  <---------TGA2(2)       --------->O2  <---------SPL7----------->RAV1(1)----------->HVH21 ----------->HVH21        --------->ANAC58    <---------MYB52(1)      --------->TOE1(2)             < ----------->TGA1         --------->ANAC46--------->ZAT14          <---------ARR14(2)        -------- ------->At4g35610 <---------GLK1(1)  --------->ZAT6------>MYB83   --------->GLK1(2)         <------- =============MYC_MYB     --------->TGA1a --------->SPL7           --------->ARR14(2)      --------->ANAC58 ===================================MYC_MYB  <-------GAMYB    ---------->DOF2<---------HSFC1(2)    <- --------->RAV1(2) --------->GLK1(1)----------->RAV1(1) --------->ANAC46 --------->DEAR3(1)--------->ANAC58   cccctgacgtctctataccggaaatcaaacgtcacctccaacagtacggttacctcccacaaaacaaagaatccgacgacgtttcgttcgaacaagctct  18585000                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                <----                                                      <-------MYC3                             <-----              --------->GLK1(2)             <---------ARR14(2)                                <------       --------->HSFB2a(2)                  --------->ARR14(2)                               --------       <---------HSFB2a(2)                  <---------GLK1(2)                  --------->CCA1(2)<----  <-------GAMYB                           --------->LBD16       --------->ARR14(2)           -------- <---------MYB46(3)            --------->MYB52(1)     ------->MYC3             --------->ALFIN1------ --------->MYB52(2)          --------->MYB46(3) <---------ETT(1)<---------ARR14(2)  <---------PCF2 ---------TOE1(2)            <---------ATHB12   --------->ANAC46<---------GLK1(2)--------->ALFIN1 --- ->ARR11(3)   <---------ARR11(3)     ---------->DOF2 <---------O2--------->GLK1(2) <---------DEAR3(2) --ARR11(3)   --------->ARR11(3)  ----------->GT1  <---------ALFIN1           --------->ARR11(3)<---- --------MYB52(1)     <---------ETT(2)  <---------LBD16  <-----------HVH21    <---------ARR11(3)<----   cgttcgttaccagaaaaatctcggtctaccaataaccggtaaaccggattccgacacgttgtcacagattctattaccaagatgtgggttccctgatgac  18585100          --------->ANAC58   --------->ANAC58   <-----------------AGL1                            --------->RAP2.6(3)   ----------------->AGL2                            --------->SPL7   --------->ANAC58                                <---------SPL7                              ------ <---------PCF2                                    ----------->HVH21                           ------ -----ANAC58                                       --------->LBD16                            ------- -----bZIP60(2)                        --------------->AtSPL8                                 <------ ---->O2  --------->ANAC58            <---------ANAC46                                      <-------- -----ANAC58                          <---------ANAC55(2)                 --------->O2     <---------ANAC55(2) ------------------TaNAC69(2)         --------->ANAC55(2)      --------->ALFIN1            --------->TGA1a ---TGA2(2)            --------->ANAC46<---------------AtSPL3<---------ZAT2                --------->ANAC55(2) --->HVH21--------->ANAC46            <---------ANAC58       --------->ZAT2                <---------TGA1a -----O2--------->MYB52(1)            <---------ANAC55(1)  <-----------RAV1(2)             --------->ANAC58 --->TGA1--------->RAP2.6(3)          <---------ANAC58<---------DEAR3(1)  <---------O2 <---------MYB52(2) ----->STF1        <-----------HVH21 <-------TEIL<---------LBD16          --------->TGA1a  --------->ANAC58 ------>ALFIN1 <------NtERF2<------ZmHOX2a(1)    --------->LBD16--------->ZAT18<---------ALFIN1------ -----ANAC46  ------>NtERF2----------->GT1 ------->TEIL<---------ATERF1(1)<---------TGA1a ----------- -----TGA1a <---------ABI4(2)   --------->AHL20(2)--------->LBD16         --------->bZIP60(2) -------   gtggaacccaaaacggcaccgtttcacacaggaaaaaaatacgtgtacttccccggacggcccaggtggacaagagacgtcccactgaaactcacgtacg  18585200  Previous    Next  AGI:  At2g45040.1    Description:  matrix metalloproteinase. similar to matrix metalloproteinase, putative [Arabidopsis thaliana] (TAIR:AT4G16640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43082.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70590.1); contains InterPro domain Peptidase M10A and M12B, matrixin and adamalysin; (InterPro:IPR001818); contains InterPro domain Peptidase, metallopeptidases; (InterPro:IPR006026); contains InterPro domain Peptidoglycan binding-like; (InterPro:IPR002477) Range:  from: 18584725    to: 18585989    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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