Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------AHL20(2)               <---------ARR11(3)                        --------->AHL20(2)                --------->ARR11(3)                       <-                 <-----------GT1     <---------AHL20(2)  <------ZmHOX2a(1)   <---------AHL20(1)    --     <----------DOF2    <---------AHL20(2)             <---------TOE1(3)     --------->AHL20(2)    -- >TEIL        <---------AHL20(2)     --------->AHL20(2)<---------TOE2(3)     <---------AHL20(2)   <--   ccaaacactttcacatttttttcaaattttttttttagttttattagaaactcacttaaggatttttctaatggaccaaaaaattttcaaaaactctaca  18570800                                         --------->ARR11(3)                                         --------->AHL20(1)                                         <---------AHL20(1)                                        --------->AHL20(2)                                      --------->AHL20(2)                                  --------->YAB1                           <-------GAMYB                              --------->AHL20(2)                          <---------MYB46(3)                              <---------AHL20(2)                   --------->MYB46(3)                          --------->AHL20(2)       <---------------AGL15 --------->ALFIN1 --------ARR11(3)         <---------AHL20(2)       <---------MYB59-------->P<--------P ------->GLK1(2)          --------->AHL20(1)       --------->TOE2(3)   <-----------RAV1(1) ------->ARR11(3)        --------->AHL20(2)     <-----------GT1  --------->MYB52(1)         <-------- -------GLK1(2)     --------->YAB1--------->AHL20(2)           <---------MYB52(2)  <-----------------   aaatctctaaactacaaaaatatcaaaattaattaataaaaaatatatagaaaccttacttagaaactaaccaatgtggttgctcttattctctatgttt  18570900                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                -----                                                                                               <-----                                                                                              -------                                                                                              <------                                                                                              -------                                                                                  <---------MYB52(1)<                                                                            <---------MYB52(1)-------                                                                      --------->WRKY12        -------                                                                   <---------bZIP60(2)        -------                                                                   <---------ANAC58           -------                                                                   <---------ANAC55(1)        -------                                                                   <---------ANAC58          <-------                                                                   <---------ANAC55(2)       <-------                                                    ------->GAMYB  <---------O2  --------------------           --------->ANAC58                      ----------->RAV1(1)  --------->WRKY38(1)  <---------ZAT14           --------->ANAC58                <---------ICU4          <---------ANAC46        <---------ZAT18 -YAB1  --------->ALFIN1                  --------->ICU4      <---------At4g35610==================== -------ANAC81              <---------ARR11(3)<-----------GT1 --------->At4g35610<-------GAMYB-------   gatttttagggtcgagcaacttctcatctagttcttcttaaacacttattacaacagagagaacagcttacgtggaccgttttcgttgtctagtacacgt  18571000      --------->AHL20(2)  <---------YAB1 -------->YAB1 ------->ICU4 --------YAB1 ---->TGA2(2) ------TGA1                                                                                   ------- -->ANAC55(1)                                                                                 ------- ---O2<---------AHL20(1)                                                               <---------WRKY18(1) -->ANAC55(2)                                                                         --------->WRKY38(1) ---------ICU4                                                                      <-------GAMYB -->O2--------->AHL20(1)                                                           <---------ANAC46 -->ANAC46                                          <---------MYB46(3)             <---------ANAC58 -->ANAC58--------->ATHB51                   --------->ARR14(2)                 <--------P <---------SPL7 -->TGA1a<---------YAB1                     ------>ZmHOX2a(1)                  <-------GAMYB -------- -->ANAC58--------->ATHB12                  <---------CCA1(2)                  <---------MYB52(1) ----STF1<---------AHL20(2)      <-----------GT1    --------->MYB52(2)        <---------MYB46(3) ----bZIP911(2)               ----------->GT1<---------ARR14(2)    <---------WRKY18(1)--------->WRKY12 --->TaNAC69(2)         <------NtERF2    <-----------GT1          --------->WRKY38(1) --------->WRKY45 ===MYC_MYB       --------->ALFIN1<-------TEIL    <---------MYB52(1)          <---------DEAR3(2) -->bZIP60(2)     <---------ATERF1(1)   <-----------GT1         <---------MYB52(1) <---------ANAC58   catcatcatatattattgggctgggccgagaatagttacatttttcctatctgtttgttccctcccgtttgaccataagccggttgcgttgaccatacgc  18571100                                                                 <------NtERF2                                                                --------->LBD16                        --------->ANAC58                        ------>NtERF2                        --------->ANAC46                        <---------ATERF1(1)                        --------->ANAC58                       <---------DEAR3(1)                       --------->SPL7                          --------->DEAR3(1)                      --------->SPL1(1)                        --------->ATERF1(2)                      <---------SPL1(1)                        <---------ATERF1(2)                     <---------SPL1(2)                        --------->ATERF1(1)     *TSS                     <---------SPL7                           <---------LBD16        --------->ZAT14 -->ANAC58        <------------------SPL14                  ------->GAMYB      ------->TEIL -->ANAC58       ------------------>SPL14       <---------MYB52(1)     >>>>>>>>>TBF1 <---------ZAT14 ->SPL7   ---------->DOF2 ---------->DOF2 <---------ALFIN1  --------->ANAC46<---------MYB52(2)   tcggactcaccacaaagcctctccgtacgaaagaggtttctgcaaaaccccttatttctcaaacgccggcgaagaagaacgaaccagtgaagagaagaga  18571200                                                                                  ------>ZmHOX2a(2)                                                                                  ===================                                                                                 <------ZmHOX2a(2)                                                                                 --------->GLK1(1)                                                                                 ====================                                                                                 --------->HSFB2a(1)                                                                                <---------ARR11(3)                                                                                <---------ARR14(2)                                 <------NtERF2                          <---------YAB1                               <---------ANAC46                     <---------GLK1(2)                             <-----------HVH21                      --------->ARR14(2)                        --------->LBD16                             <---------ARR14(2)   --------->HSFB2a(2)                       --------->ANAC46                    <---------ANAC58     --------->ARR11(3)                       --------->ANAC55(1)       --------->WOX13(1)======================HOX2a_HOX2a                       --------->ANAC58      <------MYB83  <---------ANAC46     <---------ARR11(1)                       --------->ANAC58      <------MYB46(1) <---------MYB52(1) --------->ARR14(2)                      <---------LBD16     <---------MYB52(1)<-------GAMYB      <---------ARR14(1)                      ------->GAMYB --------->GLK1(1)      <---------ANAC58    <---------CCA1(2)              <---------ATHB12 <---------LBD16   <XXXXXXXXXXXXXXXXXXXXXMIR393A/B<-----------ARR10            --------->WOX13(1) --------->ETT(1) <---------WRKY38(1)<------ZmHOX2a(1)     <---------HSFB2a(2)         --------->GLK1(2)  <-----------RAV1(1)--------->WRKY18(1) =====================HOX2a_HOX2a   agagaagagagaatcaatcaataacccgcaatgtcggggtttccatttggtcaatccaattccgttggaggattctcattcggatcttcttctgcaacta  18571300                                                                                                -----                                                                                         ------>ZmHOX2a(1)                                                                                       ------>ZmHOX2a(2)                                                                                       ==============                                                                                       ==============                                                                                      <------ZmHOX2a(2)                 -------->P                                                           ===============              <---------At4g35610                                                    <---------GLK1(2)              --------->At4g35610                                                 <---------ANAC46            --------->REM1(1)                                            <---------GLK1(2)    <------          <----------DOF2                          --------->YAB1        --------->ARR14(2)  <-------        --------->At4g35610     <---------YAB1--------->MYB46(3)         <---------ARR14(2) ---------        <---------At4g35610    <---------ARR11(3) <---------ATHB12     --------->LBD16===============     <---------At4g35610     <---------MYB52(1)  ------>MYB83        <---------LBD16 --------->ARR14(2)  ------>ZmHOX2a(1)<---------ALFIN1         <-----------GT1    <---------ZAT2  <---------ARR14(2) ========HOX2a_HOX2a         --------->DOF5.7(2) ------>MYB46(1)   <---------ALFIN1  <---------ARR14(2) ========HOX2a_HOX2a        <-------GAMYB<----------DOF2       --------->ZAT2  --------->ARR14(2)   attcctcttctgcttcatctaccacttctccgttatctttctcctttaaccaatcttcaaaccctagctccaccggattcggtttcggatcctccgtatc  18571400                                              ------>ZmHOX2a(1)                                        <---------ZAT2                                        --------->ZAT2      ------>ZmHOX2a(1)                 <---------At4g35610    ----------->RAV1(2)                 --------->HSFC1(2) ---->YAB1             <XXXXXXXXXXXXXXXXXXXXXXXMIR829.1              --------->ARR14(2) ===================HOX2a_HOX2a         <---------HSFB2a(1)          <---------ARR14(2) ============HOX2a_HOX2a                --------->HSFB2a(1)    --------->ARR14(2) ===================HOX2a_HOX2a         --------->At4g35610    <---------ARR14(2) ---ARR11(1)      <---------ALFIN1      <---------HSFC1(2)     <---------GLK1(2) --CCA1(2)     <---------ALFIN1  --------->ARR14(2)           <------------------------ANAC81 >LBD16      ------>ZmHOX2a(1)   <---------GLK1(2)         <---------LBD16  <---------At4g35610 ============HOX2a_HOX2a         <---------ARR14(2)   ------>ZmHOX2a(1)  <---------At4g35610    <----   atcaactcctgcttcctccactactccatcgtttggattcggagcttcctctactccttccttcggattcggttcttctgcttcttcatcgactccatcg  18571500                      ----------->HVH21                  ------>NtERF2            --------->At4g35610          ==========================HOX2a_HOX2a                   ------>NtERF2         <------ZmHOX2a(2)                                        <---------At4g35610         ===========================HOX2a_HOX2a                  --------->RAP2.3(2)         --------->GLK1(1)                                       --------->DEAR3(1)         --------->HSFB2a(1)                                    --------->DEAR4(2)        <---------ARR11(3)                                      --------->RAP2.3(1)        <---------DEAR3(1)        --------->ARR11(3)                                    --------->DEAR3(1)         <-----------HVH21        --------->ARR14(2)                                    ------->GAMYB<---------At4g35610        <---------ARR11(1)                                   --------->ATERF1(1)        --------->DEAR3(1)        <-----------ARR10                                    --------->DEAR3(2)     <---------ZAT2        <---------ARR14(2)         <---------HSFB2a(2)       --------->MYB46(3)     --------->ZAT2 <-       <---------CCA1(2)           --------->HSFB2a(2)       <---------ABI4(2)     ------>ZmHOX2a(1)       <---------ARR14(1)    ------>ZmHOX2a(1)               <------------AtMYB77----------->RAV1(2)  <---------ARR14(2)  <---------MYB52(1)                   --------->ARR14(2) <---------At4g35610  <-  <---------GLK1(2)  <-----------HVH21               --------->ARR14(2)    ----------->RAV1(2)  <----  --------->ARR14(2) --------->LBD16  <---------ALFIN1     <---------ARR14(2) --------->At4g35610 --- -----SPL7------>ZmHOX2a(2)----------->RAV1(2)       <---------ARR14(2)    --------->At4g35610<------   ttcggattcggatcttctgcctccgtgactcctgcttccacaactccatcgtttggatttggaaccgccgcttcttcatctgctcctgctccgtcgctgt  18571600                                                                                           <---------          --------->AtMYB61          --------->ARR14(2)                                    <---------        -------->P           <---------At4g35610                                --------->LBD16     --------->At4g35610  <---------ZAT2                                       --------->ANAC46     <---------At4g35610  <---------At4g35610                       ------>NtERF2         --------->YAB1  <-------TEIL            ----------->RAV1(2)             <-----------GT1      --------->ANAC58 -----MYB46(1)            --------->At4g35610          ----------->GT1         --------->ANAC58 -----MYB83               --------->ZAT2      <----------DOF2    ------>ZmHOX2a(1) --------->GLK1(1) -----MYB52(1)  <---------ATHB12  ------>ZmHOX2a(1)  --------->GLK1(1)         --------->DEAR3(1) ------>MYB59--------->AtMYB61  ----------->RAV1(2) --------->ARR14(2)        --------->ANAC46  <---- ----DOF2--------->MYB46(3)  --------->At4g35610    <---------ARR14(2)      <---------ALFIN1   ------   ttggttcatctaccaccaatgcttcttcagctgctcctggttcttctcctttcggatttgtaacttcctcggcctcttccaccgcaactccatcgtcatc  18571700  Previous    Next  AGI:  At2g45000.1    Description:  EMB2766 (EMBRYO DEFECTIVE 2766); structural constituent of nuclear pore. similar to unnamed protein product [Vitis vinifera] (GB:CAO70582.1); contains InterPro domain Nucleoporin, Nsp1-like, C-terminal; (InterPro:IPR007758) Range:  from: 18571186    to: 18574810    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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