Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <---------ANAC58                                                                             <---------ANAC58                                                                            <-----------------------TaNAC69(2)                                                                          <--------P                                                                        --------->HSFC1(2)                                              <---------ABI4(2)         <---------HSFC1(2)                                             --------->ANAC58           <---------HSFB2a(1)                                             --------->ANAC58           --------->HSFB2a(1)                                           ---------->DOF2             <---------TOE2(3)          ---               --------->At4g35610     <---------LBD16                 <---------TOE2(2)          <--               <---------At4g35610 <---------ICU4                  <---------TOE2(3)             ----              <---------TOE1(3)<---------HSFB2a(2)                --------->MYB52(1)             ---- --->DOF2    <-----------GT1   --------->HSFB2a(2)              <---------WOX13(1)             <-----   gcaatttcaaaattttaagcttccatgtttcttctaaaaatttcggaaagcaccgattttaaactgattaacgaaggttgcttaacatgtcaaaatacca  18558800                        ----------->GT1                                 --------->ANAC58                      <---------ANAC55(2)                               --------->ANAC58                      ----------->GT1                                 --------->MYB52(1)                      ===================bZIP_DOF            --------->LBD16 --------->TOE2(3)    <---------TGA1a                        ----------->GT1 ------>ARR14(2)      <---------O2 <---------GLK1(1)       <---------LBD16                          - -------ARR14(2)      --------->O2 --------->GLK1(1)     --------->GLK1(2)      ----------->RAV1(1) - -->MYB46(1)          <---------ANAC46                   --------->ARR14(2)  --------->ANAC58       - -->MYB83     ==================bZIP_DOF <---------LBD16 <---------ARR14(2)  --------->ANAC58-------- ----MYB59    ---------->DOF2 ---------->DOF2  ----------->ARR10  <---------TOE2(3)     <------ZmHOX2a(1)   aatccataaaaaatagaaaagaagacgtgaaaaaaagaaatccagcgggaagagtctcgaatccggttaatgaaacggcaaacaacattaggaattgata  18558900                                                                           ---------->DOF2                                                                       ------>ZmHOX2a(2)                                                                      <------ZmHOX2a(2)                                     --------->YAB1                  <---------ARR14(2) -------->ANAC58                    --------->ICU4            ----------->HVH21 -------->AtLEC2                 <---------AtLEC2     ---------->DOF2--------->ARR14(2)           --- -------->ANAC58            <---------ICU4        <----------ID1    <---------ARR14(1)      <-------- ->YAB1                    <---------DAG2     --------->AHL20(2) <---------LBD16   ----------->RAV1(1)   acatgcaagtgaaaacacagacgctctcaatttttgcattgatgacaaataaacaacaaagttgatgaccggatccaaaaatcggcaacaagtttgggaa  18559000                                               ---------->DOF2                                    --------->LBD16                                --------->ANAC58                                   --------->HSFB2a(2)                             --------->ANAC58                                   <---------HSFB2a(2)             =================HOX2a_HOX2a         <------ZmHOX2a(1)        <---------LBD16      <---------LBD16--------->ALFIN1       <---------TOE2(3)       --------->ARR14(2)     ----------->RAV1(2)          --------->ANAC46 ------>MYB52(1)               <---------ARR14(2)--------->DAG2    <------ZmHOX2a(1) -HSFB2a(2)  >>>>>>>>>TBF1 --------->YAB1----------->GT1      <----------DOF2<------ZmHOX2a(2)-------   gaacggattgaggaagaagaatcaactaatcagaattcgggaaacgtagaaaaggtacctggagctttaggaatgtgggatcaaaacgaaacatagacac  18559100                                                 ---------->DOF2                                             <------NtERF2                                            --------->LBD16                                           --------->ALFIN1                                           <------NtERF2                                            <                                           <---------ANAC46                                         <                                          ------>NtERF2                                             -                                          --------->LBD16                                          --                          --------->YAB1 --------->DEAR3(1)                                        --                         ==================HOX2a_HOX2a                                            ---                  --------->ARR11(1)  --------->ANAC46                      --------->ANAC58     ----       <---------GLK1(2) <------ZmHOX2a(2)<---------LBD16                   --------->ANAC58    ----- -->ANAC46        <---------ARR14(2)------>ZmHOX2a(1)           ----------->GT1         <---------ICU4   aaggagacagtttcttcaacgattcggatcatattgtcctaagccgcggggaaaagaaacctcgtgaagaaaatagaaacgcgatttcaattttgacgac  18559200                                     <------------CBF                                  *TSS                                ----------->GT1                               ------->MYC3                               ------->MYC2                               <-------MYC2                               <-------MYC3                               <-------MYC4                               ------->MYC4                              --------->ANAC55(2)     <---------ARR14(2)       <---------ANAC55(2)     --------->TCP20          <---------TGA1a  --------->ALFIN1            --------->O2 <-------MYC3                 <---------O2 ------->MYC3                 --------->TGA1a ---------O2                <---------ALFIN1                                                  ------- ---------ANAC46          ----------->RAV1(1)                                         --------->AHL20(2) -------->O2           --------->ANAC58                                           <---------AHL20(2) ---->MYB83            --------->ANAC46                                           --------->AHL20(2) ---->MYB46(1)         --------->ANAC55(1)                        <---------TOE2(3)   --------->YAB1 ------>MYB52(1)       <---------ANAC55(2)                    --------->YAB1     --------->AHL20(2) ----->AtMYB61         --------->ANAC55(2)             <------------CBF       --------->AHL20(2) ---->MYB46(3)         --------->ANAC58              <---------YAB1          <---------YAB1--------->TOE2(3)   caacgtggaaccagaggcactagagacgcaacacgtgtaaattggctcagtgatcaagattgaattataagattaggctattatttaattatacattaat  18559300                                                                             --------->AHL20(2)                                                                             <---------AHL20(2)                                                                             <---------AHL20(1)                                                        <---------------AtSPL8                                                        --------------->AtSPL8                                                       <---------ANAC55(1)   --------->AHL20(1)                                                       <---------ANAC46     --------->YAB1                                                    <---------MYB52(1)      --------->AHL20(2)                                                   <-----------HVH21        <---------AHL20(2)                                                  ----------->GT1    --------->ANAC58                                                ------>NtERF2        --------->ANAC58                                               <---------ALFIN1    ---------->DOF2          ---------                   --------->YAB1           --------->ANAC58     ------->GAMYB   <-----------GT1              ------------>CBF              --------->ANAC58     --------->AtMYB61     <-----------HVH21 -->AHL20(2)<---------PCF2                  --------->ANAC46    --------->MYB46(3)<---------At5g28300   atgggccactactgggcccaattacaagtcttccttctacatacaaacgacaccgttacatgtacaaccaaaagcaaattatattacagcgtcaaaaaga  18559400                                                  <----------ID1                                                --------->ANAC58                                            --------->ANAC58                                            --------->ANAC58                                       --------->TOE1(2)                                 <---------------AtSPL8                                 --------------->AtSPL8                       <------ZmHOX2a(2) ------>MYB83                      <---------ARR14(2) -------->P----------->RAV1(1)                             <-                      --------->ARR14(2) ------>MYB46(1)                                          ---                     --------->GLK1(1) <---------MYB59                           ---------->DOF2  ---                <---------LBD16  <---------------AtSPL3                    --------->KAN4(1)     <---        <---------ANAC46       --------->YAB1   --------->ANAC58    <----------DOF2              ----        <---------ANAC58      <---------YAB1--------->ANAC46       <---------ANAC58              ---- ->DOF2 <---------ANAC58     <<<<<<<<<<GATA-1 ---------->DOF2      <---------ANAC58  ---------->DOF2<   ctatcccattgtgtgattcagggagatcgacgataatagtacctacaagaaagcaacaaaaatgagtttgctttggattattcaaaagaaagaagacggg  18559500                              --------->At5g28300 -----NtERF2                <---------DEAR3(1)                                               ------>ZmHOX2a(2) --->NtERF2          <---------AHL20(1)                                                     <-------- -------->RAV1(1)    --------->ARR11(3)                                             ------>ZmHOX2a(2) ------ETT(2)        --------->AHL20(1)                                            <------ZmHOX2a(2) ------->HVH21  --------->ANAC58              --------->ARR14(2)       <---------ZAT14     <---------ARR14(2) ----->ETT(2)   --------->ANAC46              <---------ARR14(2)       <---------ZAT18     --------->ARR14(2) ---------ALFIN1--------->ANAC58          <------ZmHOX2a(1)            --------->ZAT14   ----------->HVH21   cgacacatataaacttacacgaatattttgacggtgaagatggaggagtattttcgaagaagacgctcaacagtgtaccattgagatcggtctgatccgt  18559600                         --------->ALFIN1                       <---------ANAC46                    --------->ALFIN1                   <-------MYC3                   ------->MYC3                   <-------MYC2                   ------->MYC2                <---------ANAC58                <---------ANAC58           --------->ANAC55(2)                                                                  <----           <---------ANAC55(2)                                                    <---------ARR11(3)           <---------ANAC58    <---------DAG2                              <---------ZAT6       <----           <---------ANAC58    <----------DOF2                     ----------->RAV1(1)      ---------           <---------O2<---------ANAC58            <---------YAB1 --------->bZIP60(1)       <--------     --------->MYB46(3)<---------ANAC58          <-----------GT1  <---------bZIP60(1)<----------DOF2 ---------AGL1  <---------ANAC46       <------ZmHOX2a(1) <---------HSFB2a(2)      --------->ARR11(3)   cttggtaaccaatacgtggcatgtggagtgaggctttttgaggagagaacattaccataccagaaatgacaacacaagtgttaagctctttgggagcact  18559700  Previous    Next  AGI:  At2g44970.1    Description:  lipase-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO70577.1); contains domain SSF53474 (SSF53474); contains domain G3DSA:3.40.50.1820 (G3DSA:3.40.50.1820) Range:  from: 18555888    to: 18559234    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g44980.1    Description:  transcription regulatory protein SNF2, putative. similar to CHR5 (chromatin remodeling 5), ATP binding / DNA binding / chromatin binding / helicase [Arabidopsis thaliana] (TAIR:AT2G13370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70580.1); similar to SNF2P [Triticum turgidum] (GB:ABR18490.1); similar to SNF2P [Oryza sativa (japonica cultivar-group)] (GB:AAN14536.1); contains InterPro domain SNF2-related; (InterPro:IPR000330); contains InterPro domain Helicase, superfamily 1 and 2, ATP-binding (InterPro:IPR014021); contains InterPro domain DEAD-like helicase, N-terminal (InterPro:IPR014001); contains InterPro domain DNA/RNA Range:  from: 18559515    to: 18563744    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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