Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <-----------GT1                             --------->ARR11(3)     <---------ALFIN1            <---------AHL20(2)                              <---------ARR11(3)    ------>MYB46(1)            --------->AHL20(2)                            <---------ARR11(3)      -------->P            --------->AHL20(1)  <---------ANAC55(2)      <------ZmHOX2a(1)        ------>MYB83 --------ARR11(3)               <---------ANAC46   <---------WRKY18(1)           ----------->RAV1(1) ------->ARR11(3)         <------NtERF2  --------->AHL20(2) --------->AHL20(1)  --------->AtMYB61 ---->DOF2 --------->AHL20(2)<---------MYB52(1)   ----------->HVH21            --------->MYB46(3)   agatttatgccaaattaattaccttggcatcgttacggacaaattgaataccatgaccaggatatattgtggaagagcaaaaccaacacttctccaatct  18509200                                                                                                -----                                     ---------->DOF2                                ------->GAMYB                                <-------GAMYB    ----------->GT1                   --------->MYB46(3)                               <-----------RAV1(1)                                 <---------MYB52(2)                         ---------->DOF2         --------->AtLEC2                --------------------   catattgcctcgtcttgaaaaccctacaaaagactgttgcaaagttaagacatgtaaaactgaaactcagaccacaaaattgacaacaaacaaacaaaaa  18509300                    --------->DAG2             --------->LBD16            <---------HSFB2a(2)       <----------DOF2   --------->ARR14(2)   <---------ARR14(2)  <------ZmHOX2a(1)---------->DOF2                         ---------->DOF2 ----->DOF2<---------LBD16                           --------->At4g35610                      <------ ---->ANAC81--------->HSFB2a(2)    --------->YAB1 --------->At4g35610                --------->ANAC46   aagaggatactttcccagaaataaagtcgcttacttatagtaagagctaagaagcagaagacaaagtttcaatttttctctaattacacggtttcaatga  18509400                                                                               --------->MYB52(1)                                                                              --------->TOE1(2)                                                                             <---------MYB52(2)                                                                           --------->MYB52(1)                                                                           ------>MYB46(1)            <-----------GT1                                                ------>MYB83         <---------ATHB51                                                 --------->MYB55(1)      <---------AHL20(2)                                                 <---------MYB52(2)  <---------RVE1(1)                                                      <---------MYB55(2)  --------->GLK1(1)                                                      <---------MYB46(2) <---------GLK1(2)                                                       --------->AtMYB61 <---------ARR11(3)                                                      --------->MYB46(3) --------->ARR14(2)                                     <---------ICU4  --------->ANAC46 <---------ARR14(2)                                     --------->YAB1  --------->ANAC58 --------->ARR11(3)                            <---------YAB1           --------->ANAC58          <-- ---ATHB12--------->YAB1                 --------->MYB46(3)   ---------->DOF2--------->MYB46(3)<-----   acagatattcaattatactactcaaaaattagtctagatttcaacaaatatgaaaaaatcataacaaagagaacaccaaacgaacgagatgggattagga  18509500                                                                                    <---------ZAT14                                                        <------ZmHOX2a(1)           --------->ZAT14                                                       --------->LBD16           ----------->RAV1(2)           --------->RAP2.6(2)                       <---------LBD16            <---------ALFIN1          <----------ID1                          <----------DOF2             --------->DEAR3(1)         --------->At4g35610                  <------NtERF2                   --------->RAP2.3(3)         <---------At4g35610                 ------>NtERF2 --------->DAG2    --------->ATERF1(1)      ---------->DOF2  <------MYB83         --------->DEAR3(1)        <----------DOF2               -  <---------TOE2(3)    <------MYB46(1)      <---------DEAR3(1)       <---------ANAC58           ----- --------DOF2        <--------P            --------->ATERF1(1)       <---------ANAC58           <---- -ZmHOX2a(1)<------NtERF2                ----------->HVH21---------->DOF2---------->DOF2    ---------   ctttgagattaagcggcaaacctgtaggtgattcttctaatttgcgacggcgatttcaggaaaagggttttgctttagagcccccctgcagaaaaaaagg  18509600                                                        --------->TOE2(3)                                                       --------->YAB1                            ----                                                     <---------DOF5.7(2)                        <----                                                   --------->DOF5.7(2)                         <----- --------->DOF2                                   --------->TOE1(3)                  ------>MYB46(1) ---->ARR11(3)              --------->GLK1(1)     --------->TOE2(3)                  ------>MYB83---- -----ARR11(3)              <---------GLK1(1)    ----------->GT1          ------>NtERF2 <------------CBF ->DOF2    --------->At4g35610       *TSS   <---------YAB1--------->AHL20(2)       <---------MYB59---   tctaaagagaagaagatgactacttctaagaaatctcttagggtttatgaaacgttaacataaatttctaatttgaggcccataacctaacattgattcc  18509700                                                                                <---------AHL20(2)                                           <---------RAP2.6(2)                 --------->AHL20(2)                                          --------->RAP2.6(3)              <---------AHL20(2)                                          <---------At5g28300              --------->AHL20(2)                                         <-----------GT1                   --------->AHL20(1)     --------->MYB52(2)                  <---------ICU4                    <---------AHL20(1)   <---------MYB52(1)                   --------->ICU4                    --------->YAB1         <--- -->NtERF2                            >>>>>>>>>GT-2                      <---------YAB1          ---- -----RAP2.6(2)                     --------->At5g28300               ===============================HOX2a_HOX2a ----LBD16                         ----------->GT1                    ------>ZmHOX2a(1)       <------ZmHOX2a(2) ----->LBD16                     <---------LBD16        <---------AHL20(2)--------->AHL20(2) -------- --->NtERF2  <---------YAB1   ---------->DOF2      --------->ARR14(2)--------->TOE2(3) --------->ARR11(3)   ggcccattagttgttatgttttgtctgcccattaatgcggtaattacggcccaaatattcaattttggattccttattatattatatagtatctcgatcc  18509800                                                                                   --------->ARR11(3)         ----------->GT1  --------->AHL20(2)                                       <---------AHL20(1)         <---------ANAC55(2)                                                       --------->AHL20(1)   --------->AHL20(2)     <---------AHL20(2)--------->AHL20(2)          <---------YAB1   <---------YAB1 -------DOF2        ----------->GT1         <---------AHL20(2)          --------->AHL20(2) -->ZmHOX2a(1)  --------->DAG2             --------->AHL20(2)           <---------AHL20(2) ->ARR14(2)    ---------->DOF2         <-------TEIL                  <----------DOF2   ----------->GT1   tttcatataatatgtaaaaaagttgtaaataaatatgcaagtccatttaattttgttttcatataagaaaacttttaattgcatatatattgttatttga  18509900                                                                                      <---------ARR11(3)                                                                                      --------->GLK1(2)                                                                                      --------->ARR11(3)                                                                                     --------->RVE1(1)                          <---------ATHB12                                        --------->YAB1                        --------->WOX13(1)                               <---------ZAT14         ----                <---------YAB1                                           --------->ZAT14--------->TOE2(3)              <----------DOF2             <-------TEIL    --------->At4g35610    --------->AHL20(2)   agagttttagataaaacttttattgtcaatcgataattttcatgttcatggttttgtatcagattactgaatgagtttagtcattaaaaatcttagaaat  18510000                                                                                                <----                                                                          --------->ANAC55(2)  <-----                                                                          ----------->GT1  <---------AHL20(2)                                                                          <---------ANAC55(2)  ------                                                                  -------->P<---------AHL20(2) ------                                                                  ------>MYB46(1)          --------->AHL20(2)   <---------ANAC55(2)                        <-----------RAV1(1) ------>MYB83    <------MYB83 <-----   ----------->GT1                            <---------MYB46(3) ----------->RAV1(1)      --------->AHL20(2) ----->AHL20(2) ---------->DOF2             ----------->RAV1(2)--------->MYB46(3) <------MYB46(1)  <-   caaatatgtaaaatatacaaaagacacacatagaagcatggaacccatctgttgcaagagaagaaaccaacatgatatgtaatttggttttatttaattt  18510100  Previous    Next  AGI:  At2g44860.1    Description:  60S ribosomal protein L24, putative. Identical to Probable ribosome biogenesis protein RLP24 [Arabidopsis Thaliana] (GB:O22165); similar to STV1 (SHORT VALVE1), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT3G53020.1); similar to unknown [Populus trichocarpa] (GB:ABK93329.1); contains InterPro domain Ribosomal protein L24e; (InterPro:IPR000988); contains InterPro domain TRASH (InterPro:IPR011017) Range:  from: 18507878    to: 18509637    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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