Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->HSFB2a(2)                <---------HSFB2a(2)                                      <---------AtLEC2            --------->TOE1(2)                                          --------->AtLEC2            --------->TOE1(3)                                      <-----------GT1            --------->TOE2(2)    ------>MYB46(1)                  <-----------GT1            --------->TOE2(3)    ------>MYB83                 ------->TEIL------->TEIL           <---------HSFB2a(1) --------->AtMYB61         <---------At4g35610  <---------GLK1(1)     <------ZmHOX2a(1)                --------->At4g35610    <---------YAB1  --------->GLK1(1)    ----------->GT1          <---------REM1(1)--------->AHL20(2)<-----------GT1 ------ZmHOX2a(1)      <----------ID1    --------->ARR11(3) <-------TEIL<-------TEIL<-----------GT1   gaggaactctgtaaccttcgacaagaggaaaaaccaactcatagaccttgttgtagtacagatgcattttaacatgcatgttatttttccaattctcaac  18473500                                                                                                    -                  <---------AHL20(2)                                                             ----            --------->ANAC55(2)                                    <---------ANAC58     <---------MYB52(1)            <---------ANAC55(2)                                    <---------ANAC58     <---------ARR14(2)          --------->AHL20(2)       <---------AHL20(2)    ------>ZmHOX2a(1)              --------->ARR14(2)          <-----------GT1 ----------->HVH21              <---------YAB1           --------->ETT(2)---       <---------ICU4   <---------At4g35610             --------->TOE2(3)     ------->TEIL  <-------TEIL   aaggattaaaaattacttatttattcatatgacatatataaactaaatgatacagcatccttattcagtgctggtccatgaatctcgaccgatattcatc  18473600         <---------bZIP60(1)         <---------ANAC46         --------->bZIP60(1)         <---------TGA2(1)         --------->O2                                                            <----------DOF2         <---------O2                                                        <-----------GT1         --------->TGA2(1)                                               <----------DOF2        ----------->STF1                                                 --------->TOE2(3)        <-----------STF1                              --------->DAG2  --------->AHL20(1)            <       <---------TGA2(2)                <----------DOF2               --------->ARR11(3)           --      ----------->TGA1     <---------YAB1        --------->TOE2(3)    <---------AHL20(1)        <---- -------->YAB1            --------->AHL20(1)     --------->TOE1(3)    <---------ARR11(3)        ----- ----->TOE2(3)<---------REM1(2)      <---------AHL20(2)              --------->RVE1(1)         ------ --->ZmHOX2a(1) ------->GAMYB        <-----------GT1 ---------->DOF2 --------->CCA1(1)        <------   cttcataaatgacgtcaacacacagaaatatgttagtattttctttttttgccttaaaagtggaaaccaaaatatctttaaaccttttatgaaatggcgg  18473700        --------->ANAC55(2)        <---------ANAC55(2)        --------->ANAC58        --------->ANAC58                                  <---------AHL20(2)       --------->SPL7                                     --------->AHL20(2)   <---------------AtSPL3                                 --------->ATHB12 ---------ARR14(2)                                        --------->ATHB51 ------->GLK1(1)                                     --------->ANAC58 --NtERF2                --------->At4g35610         --------->ANAC58 ---->At5g28300        ------>ZmHOX2a(2)       ----------->HVH21                               <----- ----->GT1            <---------At4g35610    ----------->RAV1(2)                 <-----------HVH21--- ---ANAC46--------->DOF5.7(2) ---------->DOF2<---------At4g35610    <----------DOF2            ------   taaatccagtacgttaccagtctgatctgatgaaaagacagttttgcccctgaccacgaattatttgaaacttttattagccctgtcatatggactacta  18473800                                                                                      <------------CBF                                                                                    --------->AHL20(2)                                                                                    <---------AHL20(2)         <----------DOF2                                                      --------->ANAC46   ----    <-------TEIL                             <-----------GT1            <-----------HVH21      *TSS ----HSFB2a(2)          ------->TEIL  <----------DOF2                 ------>ZmHOX2a(2)        ------ ------->DOF2---------->DOF2          <---------DAG2                 <---------At4g35610   ---------- --->HSFB2a(2)       <---------ANAC55(2) --------->AHL20(2) ------------>CBF<---------ALFIN1 --------   gaaagatgcaacttttaaagaagacgtatgtgtccattcacttttatatactaattcacatccacaatttgatctgtcacacttcatttattgtaaagat  18473900           ----------------->AG                                                 --------->HSFC1(1)           ----------------->AGL1                                        <-----------GT1    ------->PIF5                                                        <-----------GT1    <---------MYB52(1)                                              <---------CCA1(1)    <-------PIF5                <------ZmHOX2a(1)                  --------->ARR11(3)   <---------ZAT2     --------->ANAC58                    --------------->AGL15 --------->HSFB2a(2)   <---------At4g35610--------->ANAC58                    <---------------AGL15 <---------HSFC1(1) <-----------RAV1(2) --------->SPL7                     <-----------------AG<----------DOF2 ----->At4g35610    <---------MYB52(1)                  <-----------------AGL1  <---------HSFB2a(2)-- --->ARR11(3)      <---------SPL7         <---------AHL20(2)       <---------ARR11(3)            ---- >DOF2<---------MYB46(3)       ----------->GT1       <----------DOF2<---------RVE1(1)        <------- ->ICU4    ===============================================================MADS_MADS        <---------AHL20(2)   gctgcaggtggtttccaataccgtaagcaaactaggaaaaatataaaaatgttgactttacaaaattgggatatttatctttctagaagaaattttaaca  18474000                  <-----------RAV1(1)         --------->ANAC58         --------->ANAC58       <-----------GT1      --------->ARR14(2)      <---------ARR14(2)   <---------AHL20(2)                    <---------------AtSPL8   --------->AHL20(2)                    --------------->AtSPL8                                     < ------->AHL20(2)------->TEIL        <---------ZAT14    ---------->DOF2                            <- ------->GT1    <---------AtLEC2     --------->ZAT14 <---------ANAC55(2)         <------ZmHOX2a(1) <- ----GT1 --------->ANAC46      <----------DOF2      <-------TEIL      --------->AHL20(2)           <-   agtatatatatacgctatgcatgttgccatactctttagtatagtagtactaaatacataaagagcaaacaaaaaaatatggaggaaacaaaaatgagtt  18474100                                  <---------------AGL15                                  --------------->AGL15                                 ----------------->AGL1                                 ----------------->AG                                       ---------                                 <-----------------AGL2                                     <--------                                 <-----------------AGL1                                     <--------          <----------DOF2       -------->P                                                  ---------    <---------YAB1       --------->YAB1                                             ---------->DOF2 ---------WOX13(1)      ----------->HVH21                     ========================HOX2a_HOX2a --------ANAC58     --------->ZAT14        --------->ALFIN1   =====================HOX2a_HOX2a --------ANAC58     <---------ZAT14      <---------At4g35610  ------>ZmHOX2a(2)------>ZmHOX2a(1) --------AtLEC2     --------->ZAT18    <-----------RAV1(2)----------->HVH21 ------>ZmHOX2a(1)   tgcttgatgattcttttacaagtgcaatgacacttaccaattcaggtgtgcctcaagtccctgatcgctacgttcttcctccttcgcaaaggccagctct  18474200                                                          <---------ALFIN1                                                          <---------MYB55(2)                                                          <---------MYB111(1)                                                          --------->DEAR3(1)                                                          --------->AtMYB61                                                          <---------MYB46(2)                                                          --------->MYB46(3)           --------->ANAC46                                  <-----------HVH21       <---------MYB111(2)     --------->ANAC58                          <---------ALFIN1 ------>ZmHOX2a(2)-------->P            --------->ANAC58 >ZAT2                   <---------ZAT14 --------->ARR11(3) ------>MYB83      --------->ANAC46 -ZAT2                   --------->ZAT14 <---------ARR11(3) ------>MYB46(1)   --------->ANAC58 -At4g35610   <------NtERF2      ------>ZmHOX2a(1)<----------DOF2        <------ZmHOX2a(2) >At4g35610  ----------->RAV1(1) =================HOX2a_HOX2a <---------DAG2  --------->ANAC58  <----   tggttcaagcttaggcaccagcgagactacacttcctgtcattgatctctctcttttgcaccaacctttccttcgatccctcgcaatccacgagattagc  18474300                          ----------->GT1                         <---------TOE1(3)               --------->ANAC58               <------MYB46(1)                       --------->ARR14(2)               <------MYB83                          <---------ARR14(2) <---------ANAC58        <---------TOE2(3)          --------->GLK1(1) <---------ANAC58       <-----------RAV1(2)     --------->YAB1 <---------ANAC46    <----------DOF2       <----------DOF2        <---------ANAC46 -----AtLEC2  --------->MYB59              <---------DAG2--------->ANAC58      --------->AtLEC2    <-   atggcctgcaaggagtttggtttctttcaggtaaaataagtcatgctttatcacaaatccagcaagttttgtgtttatttcatgcaaattcagtccaagc  18474400  Previous    Next  AGI:  At2g44798.1    Description:  other RNA Range:  from: 18473539    to: 18476370    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g44800.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors [Arabidopsis thaliana] (TAIR:AT3G60290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62332.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 18473895    to: 18475626    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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