Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------AtMYB61                                        <---------ANAC46                                  --------->GLK1(2)                                  <---------ARR14(2)                               <---------ANAC58                               <---------ANAC58                            <---------DEAR3(1)                           --------->At4g35610                           <---------ZAT2 --------->ALFIN1         <---------ANAC58  --------->ATERF1(1)         <---------ANAC46  <---------At4g35610                                    --------->ANAC58     --------->ZAT2<-----------HVH21    <---------ANAC58                   <-----------HVH21    -----     <---------At4g35610  <---------ATERF1(1)                             <---------bZIP60(1)   <----     --------->At4g35610--------->RAP2.6(3)         ---------->DOF2       --------->bZIP60(1)-------- >WRKY38(1) <---------TOE1(2) <------NtERF2    <------ZmHOX2a(1)       <---------MYB52(1)  <---------LBD16 -->HVH21<---------ANAC58<---------DEAR3(1)  <---------ANAC46    ----------->HVH21--------->ANAC58 >WRKY12<-------TEIL  ----------->HVH21 <---------ANAC58         --------->MYB46(3)     ----------->HVH21   ctgaatcagcttcgtgtgttccatcagacggctgcgagtctggggtggaggagagaaaggagaggctacgaccgtaatgtcaccaagacagtgaccgggt  18467900                                            <---------ANAC58                       <---------ATERF1(1)                                            <---------ANAC58                       <---------RAP2.6(3)                                    <------ZmHOX2a(2)                             --------->RAP2.3(2)                                   --------->AGP1                                 --------->RAP2.3(3)                             <---------bZIP60(1)                                  --------->DEAR3(1)                             --------->bZIP60(1)                                --------->At4g35610                             <---------ETT(2)                             --------->LBD16                       ------>ZmHOX2a(1) <----------DOF2                 <---------ANAC46     --------->At4g35610     --------->ETT(2)                            <------NtERF2     <---------At4g35610  <-----------RAV1(1)                           <---------LBD16 <------ZmHOX2a(1)     ====================HOX2a_HOX2a                 <---------ANAC46 ---->ALFIN1      <------MYB83<-----------HVH21                      <-----------HVH21 -----REM1(1)     <------MYB46(1) <---------At4g35610               ----------->HVH21           <---- ->LBD16         --------->MYB59  --------->At4g35610               <-----------RAV1(1)     ---------   gtaggacagatgaaatagtttggtcctactgtcgtcagatcaactttggtgtctccatcggaatggttctctgtcgcggatgagccgtctccattcatat  18468000                                                                          --------->ANAC58                                                                    --------->TOE1(3)           ------->GAMYB                                            --------->TOE2(3)           <---------ALFIN1                                       -------->P --------->MYB52(1)          --------->MYB46(3)                                    <---------MYB111(1)  <----------DOF2                                               <---------MYB111(2)     <---------ANAC58 <---------ANAC58                                      --------->TOE2(3)  --------->ANAC46 <---------ANAC46        --------->ANAC46             --------->ZAT6<---------MYB59     <---------ANAC58 <---------ANAC58      <---------ALFIN1              <---------YAB1----------------->AGL1<----------- -------RAV1(1)       --------->MYB46(3)             <---------TOE2(3)    --------->ANAC58         -- >YAB1  --------->WOX13(1) --------->ZAT14          <-----------GT1----------------->AG <---------ANAC46   gtggctttgtcaaccacattcacatccaccgtacttgaactctgtttcaaagattaacattagccacttacctaaaacgaaacagagttttcttgtacga  18468100                                                    --------->ANAC58                                      <---------ARR14(2)                                      --------->ARR14(2)            -------->P                --------->GLK1(2)            ------>MYB83           ------->GAMYB    --------->ANAC46          <---------MYB111(1)    -------->P         --------->ANAC58          --------->MYB46(3)     --------->ANAC58   --------->AtLEC2          <---------MYB46(2)   <---------ALFIN1     --------->ANAC55(1)          <---------MYB59     --------->LBD16      <---------LBD16          --------->AtMYB61  --------->LBD16--------->REM1(2)          <---------MYB111(2)--------->ANAC58    --------->ZAT18       <-----------GT1       --------->ANAC46    <---------WRKY38(1)     --------->YAB1          --------->ANAC58    <---------WRKY45    <---------YAB1      <----------DOF2     --------->ZAT14 ----AtSPL3 ------>MYB46(1) <---------LBD16 <---------ZAT14                                     <---- --------->GT1    ---------->DOF2--------->ANAC58<---------ZAT18   --------->ATHB12             -----   taagttataataccaaccctgaaagtctttcccgcaacccaatctgtgtagtccacgcaattggcccattgattagcctctaattaagtcatagagactg  18468200                                                                                  --------->REM1(2) -                                                                      <---------TOE1(3)            --       --------->At4g35610                               <---------MYB46(3)      --------->ALFIN1  <-       <---------At4g35610                 --------->ANAC58           <---------TOE2(3)        ------    <---------At4g35610       ---------->DOF2            --------->MYB52(2)     ------->MYC3   <----- -----ZAT14                  <---------ATHB12  ---------->DOF2       *TSS       <-------MYC3  ------- ---->ZAT14         --------->ETT(2)       --------->ANAC58<XXXXXXXXXXXXXXXXXXXXMIR3932A/B   <-------   caggcctgcagatgggcctgggtcgatagcaatgaagcccataacaaggaaaagaccattcgttgccatcttgaggtttaaacgtggagagctattttaa  18468300                            --------->MYB52(1)                            <---------DOF5.7(2)       ----------->HVH21 --------->YAB1 <---------TOE2(3)    --------->MYB52(1) --------->DOF2       <---------ICU4 ------->AHL20(2)     --------->YAB1                                                       <---------TOE2(3) --------AHL20(2)    <---------ATHB51                                              --------->TOE1(3) --->AHL20(2)        --------->ICU4      <-----------TBP                           --------->TOE2(3) ----AHL20(2)    <------ZmHOX2a(1)   ----------->GT1                             <---------TOE1(3) -->AHL20(2)    ----------->GT1     <---------AtMYB61                            <---------TOE2(3) --AHL20(2)   <------ZmHOX2a(1)  --------->ALFIN1---------->DOF2        --------->YAB1    --------->MYB52(1)   attaaagatgtgaagaggaggaaataatggtaacggtgatggtttatataacaaagaggcatgagaacgactaatgagaaattaagcttaattaagggaa  18468400                                                       ------>ZmHOX2a(1)                       <---------AHL20(2)              --------->ICU4                       --------->AHL20(2)              <---------YAB1                       --------->ATHB51         --------->ZAT18                       <---------ICU4           <---------ZAT18            <---------ALFIN1                   <------ZmHOX2a(1)         <---------ZAT18           --------->MYB59   ----------->RAV1(2)         --------->ZAT18 <---------YAB1    ---------->DOF2                                          -    ---------->DOF2   --------->ICU4     --------->LBD16--------->ATHB12                            -   tgtctgaaaagtcccctcttcttaattatttttgagttatgtccgtaaaggacactcctgattagggtcaaattccattggcattgctcatgtgttattg  18468500                           ---------->DOF2            --------->WRKY18(1)           <-----------HVH21     <----------DOF2                                   --------->YAB1 -------->ANAC58        --------->AHL20(2)      --------->YAB1                    <---------YAB1 -------->ANAC58  <-----------HVH21             <---------AHL20(2)              --------->YAB1   acaaggtactcatggtcatgggtcaaataaaaagtctttgacaatactatttataagaaaattagagaaacttatcttcatattatcatatataacttaa  18468600                                                                                                   >>                                                                                                   --                  --------->MYB46(2)                                                               --                  --------->MYB111(1)                                                            ----                  --------->MYB52(2)                                         <---------GLK1(1)   ----                  ----------->GT1      <---------TOE2(3)                 <---------HSFB2a(2)    -----                 <--------P  <---------ANAC58                            --------->HSFB2a(2)<--------           ---------->DOF2   <---------ANAC46                        <------MYB46(1)    --------->AHL20(1)         >>>>>>>>>RAP2.2     <---------ANAC58                        <------MYB83       <---------AHL20(1)      <---------CCA1(2)<---------TOE2(3)                            --------->MYB59    --------->AHL20(2)    --------->YAB1<---------MYB46(3)   <---------TOE1(3)    --------->CCA1(2)--------->GLK1(1)-------   gttctatcatatctaaagggtagttaagtttgcgtcaatataaggttttgactcttatggagagatgagttcggtccagaattcttcaaatatataacca  18468700     --------->AHL20(2)                      <-------TEIL    --------->AHL20(2)                    <------MYB83 >>>>>>>RAP2.2                            <------MYB46(1) ------->YAB1                            --------->MYB59 ------->TOE2(3)                 <---------AHL20(2) -->MYB83                       <---------AHL20(2) -->MYB46(1)                    --------->AHL20(2)                ------>MYB83 ---->WOX13(1)              <---------AHL20(2)                    ------>MYB46(1)                  <- ---GT1  --------->AHL20(2) --------->AHL20(2)  <---------At4g35610                          ------>ZmHOX2a(2) -->MYB46(3)      --------->CCA1(2)---------->DOF2              <---------MYB59        --------->ANAC55(2)   atctaaataaaaaatataagataagagtttttaatttaaaagctaggtacagctaatcgaatactacctatcccaagttgcatttgtttatgtgatcgtt  18468800  Previous    Next  AGI:  At2g44780.1    Description:  pseudogene, blue copper-binding protein II Range:  from: 18467762    to: 18468269    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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