Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                             <---------ALFIN1       -                                                                        --------->MYB52(2)        <--                                                                  --------------------->WRI1  ------>ZmHOX2a(1)                                                                 <---------ICU4               =======                                    ----------->GT1              --------->ATHB12      <---------GLK1(2)                 <-------TEIL --------->TOE1(2)                 <---------YAB1  --------->AtMYB61 ---      >>>>>>>>>TBF1   <----------DOF2                --------->YAB1   <---------MYB52(1)    ---------   aacaagaagaagaaatggattcatcttttaatccaacgatgtaaattaccaagaattagaatgagcatcattgttagttccacctccaaaattctcctga  18455700        ------->GAMYB        <---------ALFIN1       --------->MYB46(3)     <-----------GT1  --------->TOE2(3) --------->ATHB12                --------->ANAC58 <---------ICU4                  --------->ANAC46                    <---------ARR11(3)  <---------AHL20(2) <--------HAHB4                  --------->ANAC58                    --------->ARR11(3) --------->AHL20(2) ---------YAB1                 <---------ALFIN1            ----------------->AGL3       <---------AHL20(2) -------->ICU4           --------->ARR14(2)               ------>MYB46(1)  <---------ICU4--------->AHL20(2) -------ICU4      ------>ZmHOX2a(2)                       ------>MYB83<------ZmHOX2a(2) <---------AHL20(1) ========================HOX2a_HOX2a                  --------->ARR11(3)  <---------ATHB12   -------- ------>YAB1      ==================HOX2a_HOX2a       <---------ARR11(3)  --------->AHL20(2) <------- -->RAV1(2) <----------DOF2  ------>ZmHOX2a(1)--------->YAB1    <---------ATHB12        --------->AHL20(1)   tcatcattaaccacctttgatcccaagggtcctccaccctacaaaaaatcatattagaccttccaaatcaagatcaataaatacttcaaataaaattaaa  18455800        --------->AHL20(2)    <----------DOF2   ------>ZmHOX2a(2)  <---------RVE1(1)  <------ZmHOX2a(2) --------->ARR11(3) --------->ARR14(2) <---------ARR14(2) <---------ARR11(3) <---------AGP1 --------->AGP1                   <------ZmHOX2a(2) --------->ARR14(3)      ---------->DOF2         <---------YAB1 <---------ARR14(3)  ---------->DOF2---------->DOF2                   <-------TEIL                  < ->AHL20(2)         <---------AHL20(2)  <---------ARR11(3)     <---------STY1(1)           <------ZmHOX2a(1) --AHL20(2)      ------->TEIL    <---------ARR11(3) <---------YAB1   --------->ALFIN1 --------->ALFIN1   caagatctttttatatatgtatataaagaaagagagatcaaagacctgaagattattagaaaaccctagaggtgcatgagtagtagtagtggaggaagag  18455900                                                                           ---------->DOF2                                                                       --------------->AGL15                                                            --------->ARR11(3)             <-------TEIL                                                           <<<<<<<<<<<<<<<<<LFY   <---------TOE1(1)                                                    <---------TOE2(3)  <---------------AGL15   ------                      ---------->DOF2   >>>>>>>>>TBF1----------->GT1  <-----------------AGL3   <-----         ---------->DOF2             >>>>>>>>>TBF1  --------->DAG2    <-----------------AGL1   <----- ---------YAB1  <------ZmHOX2a(1)<------ZmHOX2a(1)---------->DOF2<---------MYB46(3)   <------ZmHOX2a(1)   ttgtgaatggggaaagaaggagaagaaagagaagaggaagaagaagaagagaaaaaggttaagacattggtttcttcaaaaggaacgaggaagttcatat  18456000                           --------->ANAC55(2)                       <-----------HVH21                      <---------bZIP60(1)    <-----------GT1                      --------->bZIP60(1)   --------->ICU4                 ------>NtERF2            <---------ICU4                --------->DEAR3(1)     ------>ZmHOX2a(2)              <---------ATERF1(1)      ----------->GT1                 >>>>>>>>>>>>>>>>>LFY            --------->ATERF1(1)        ===================================HOX2a_HOX2a          <---------DEAR3(1)         <---------ARR11(3)            ------>ZmHOX2a(1)  --------->TOE2(3) --->ARR14(2)--------->DEAR3(1)      --------->ARR11(3)           <---------ALFIN1  *TSS ----ARR14(2)<---------DEAR3(1) <---------REM1(1)              <---------ALFIN1   <---------AHL20(2) ----GLK1(2)<------NtERF2  <---------ANAC55(2)     --------->ARR14(2) ------>ZmHOX2a(1)------------>CBF   tctcttgaatcgtcgtcgacgacgatgtcacttgttgtagatcgtaattactgaatactcttctccctcctccttccattgtttttaatctcaatctctc  18456100                                                                      --------->YAB1                                                                     <---------AHL20(2)                                                                     --------->AHL20(2)                                                                    <---------AHL20(2)                                                                    --------->AHL20(2)                                                                 --------->AHL20(2)                                                                --------->AHL20(2)                                                                <---------AHL20(2)                                                              ----------->TBP                                                         <-----------GT1                                --------->AHL20(2)    <---------AHL20(2)                         ------------>CBF            <---------AHL20(1)         <---------AHL20(2)              >>>>>>>>>WRKY6  --------->AHL20(2)     --------->AHL20(2)   <---------TOE2(3)            --------->WRKY38(1)<---------AHL20(2)    --------->AHL20(1)  <---------ICU4     <----------DOF2   <-----------GT1               <---------AHL20(2)  --------->YAB1     ---------     <---------DAG2 --------------->AtSPL8    --------->ZAT6--------------->AGL15           --------- ---------->ID1     <---------------AtSPL8 ----------->HVH21<---------------AGL15         <----------DOF2   cttgttcctttttgttgactattttgtaccaatttaaaatagtgtatgacactaatttatttctatataaattaataatgttttaaatgttactttgacg  18456200                                                                 --------->ARR11(3)                                                                 <---------ARR11(3)                                                             ---------->DOF2                                                          <-----------HVH21                                                        <-------MYC4                                                        -------->ABF1                                                        ------->MYC4                                                        ------->MYC2                                                        <-------MYC2                                                        <-------MYC3                                                       <---------O2                                                       <---------TGA1a                                                       --------->TGA1a                               <------MYB46(1)         =================bZIP_DOF                               <------MYB83            --------->ANAC46                          <---------------AtSPL3       --------->ANAC55(2)                       ==========================================bZIP_DOF                       ---------->DOF2      ------->TEIL------->MYC3                <---------ANAC46     <---------ANAC58  <---------ANAC55(2)                   <-------                <---------ANAC58     <---------ANAC46<------------OsbHLH66            <-----------GT1             <----------DOF2 <--------P<---------ANAC46--------->O2                --------------->AtSPL8 <-----------GT1<---------ANAC58     <---------ANAC58<---------ALFIN1          <---------AHL20(2) >WRKY12    <---------ANAC58 ====================================MYC_MYB    --------->AHL20(1)     <- -->HVH21   <---------ANAC58 --------->ALFIN1      <---------ALFIN1        --------->YAB1    <-------   gtttatcttctcttgctttcgtatagaaagggtagggcttcgtgtgtatgtccccacacgtgtcaaagaccctccaaacatattatttgtaccattcgtg  18456300                                                                                           --------->AHL20(1)                                                                                           <---------AHL20(1)                               --------->ICU4                                             <---------AHL20(2)        <---------WRKY12      <---------TOE2(3)                                         --------->AHL20(2)        <---------WRKY38(1)<---------AHL20(2)                                          <---------AHL20(1) --ANAC58                 <----------DOF2                                              <---------ARR11(3) ---------DOF2       <---------ANAC46       <---------CCA1(2)                          --------->ARR11(3) --ANAC58         ----------->HVH21       --------->YAB1                  --------->AHL20(2)<--------   tctttggcagtcaacttcatgtgaagtgttttaatgtttataaatcatatcgctaacaaaacaaaattcgattccattatatactcgaatatatatattt  18456400                                                             <------NtERF2                                                             --------->ATERF1(1)                                                            <---------DEAR4(2)                                                            <---------ATERF1(1)                                                            ------>NtERF2                                                            <---------ERF1                                                            <---------ORA47(2)                                                            <---------RAP2.3(1)                                                           <---------RAP2.3(3)                                                           <---------RAP2.3(2)                                                        --------->DAG2                                                     --------->AtMYB61                                                 --------->ETT(2)                                         <---------ARR14(2)<---------RAP2.6(2)                             <---------ARR11(3)  <---------ETT(2)                         --------->TOE2(3)   <---------AtMYB61       --------->AHL20(2)                     --------->GLK1(1)<---------ANAC58 ---------->DOF2<---------AHL20(2)                  --------->TOE2(3)   <---------ANAC58---------->DOF2<---------AHL20(2) -AHL20(2)       ----------->GT1      --------->ANAC55(2)  <---------DEAR3(1)   cttcgcataattcaaaacatcgtaaatccttgatatttatgcgtattgtggtcgaccaaaggcggcgatttttaaattcagtttaacaaaaaacaaattg  18456500               <---------TOE2(3)          --------->AHL20(2)         --------->ARR11(3)                          <---------AHL20(1)         <---------ARR11(3)                          --------->AHL20(1)                         <----         <---------AHL20(1)             <---------ANAC46                                        <----       ------->TEIL        ----------->RAV1(1)      --------->AHL20(2)  --------->AHL20(2)<---------ICU4    <---------YAB1        --------->ANAC46   ---------->DOF2          ----------->GT1     --------->YAB1 <---------AHL20(2) --------->KAN4(2)   ----------->GT1  <---------------AtSPL8  <---------KAN4(2)   cattttatgaatatatataggttattccacaacattctaatatcgtataaagaaatatatatgtacgaagaaatgtaaatacgaatatacaataagtact  18456600  Previous    Next  AGI:  At2g44745.1    Description:  WRKY family transcription factor. Identical to Probable WRKY transcription factor 12 (WRKY12) [Arabidopsis Thaliana] (GB:Q93WY4;GB:Q8S8S5); similar to WRKY13 (WRKY DNA-binding protein 13), transcription factor [Arabidopsis thaliana] (TAIR:AT4G39410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70509.1); contains InterPro domain DNA-binding WRKY; (InterPro:IPR003657) Range:  from: 18454348    to: 18456084    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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