Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  <------ZmHOX2a(2)                               <---------ARR11(3)                               --------->ARR11(3)                               --------->ARR14(2)                                                  <-                               <-----------ARR10                                                   --                               <---------ARR14(2)                                                 ---                               <---------AGP1                         <---------HSFC1(2)         ----                               --------->AGP1                         <---------HSFB2a(1)       -----                        <-----------HVH21                             --------->HSFB2a(1)     -------                        --------->LBD16                               --------->HSFC1(2)      <------                       --------->DREB2C(2)                            <---------At4g35610   ---------                       --------->ANAC46                               <---------ZAT2        ---------                       --------->ATERF1(2)                           <-----------ARR10   --------->ZAT18                       <---------ATERF1(2)                           --------->ARR14(2)  <---------ZAT14                       --------->DEAR3(1)                         --------->HSFB2a(2)    <------NtERF2                      <------NtERF2                               <---------HSFB2a(2)   ------>NtERF2                     --------->MYB52(1)                     <---------DAG2             --------->ANAC58                     ------>NtERF2                      <---------MYB52(1)             --------->ATERF1(2)                     <---------ATERF1(1)              --------------->AtSPL3           --------->ANAC58                    --------->DEAR3(1)                --------------->AtSPL8           <---------ATERF1(2)                    <---------ALFIN1                 --------->SPL7--------->LBD16     <---------RAP2.3(3)                 --------->ANAC46            ------->TEIL  ----------------->AGL1      <---------bZIP60(1)                 --------->ANAC58           <---------CCA1(2)<----------DOF2          --------->RAP2.6(3) ------->TOE1(2) --------->ANAC58------>ZmHOX2a(2) <-----------HVH21 <---------ARR14(2)--------->bZIP60(1) --->TEIL   <-----------GT1   <---------CCA1(2)    <---------SPL7<---------LBD16    ----------->HVH21   acccaagacgatataaacctcgccaccggcacagatctagctctctgtatctcggtccggtaccttttccggagcttctccatcttgtgacggcactgaa  18445300                                      -------->P                                      ------>MYB83                                      ------>MYB46(1)                                     --------->MYB55(1)                                    <---------MYB46(2)                             <---------MYB52(1)                            <-------GAMYB                        ------------>AtMYB77                       <------NtERF2<---------MYB111(2)                      <---------DEAR3(2)------->GAMYB                     <---------DEAR3(1)--------->MYB46(3)                    --------->ALFIN1<---------MYB55(2)                   <-----------HVH21<---------MYB111(1)                  ==================MYC_MYB                                                     -----                  <---------bZIP60(1)--------->MYB52(1)                                      <------- --------LBD16    --------->ANAC46  --------->AtMYB61                                        <------- ------->LBD16    --------->O2      --------->DEAR3(1)                                      --------- ------>DEAR3(1)  ==================MYC_MYB   <---------HSFB2a(2)                    --------->At5g28300 ----->MYB46(3)   --------->TGA1a   <---------ALFIN1                              --------->LBD16 -->TEIL          =============================MYC_MYB                       <---------GLK1(1)<------ -->ZAT14         ===================MYC_MYB--------->At4g35610              --------->GLK1(1)------- ---ZAT14         <---------O2  --------->At4g35610                    <----------DOF2      --------- >ANAC58          <---------TGA1a   --------->MYB46(3)        <---------ATHB12    <---------LBD16 >ANAC58     <---------ICU4<---------MYB46(3) --------->HSFB2a(2)     <---------DAG2 <-------GAMYB   ccgcggttttcttaagaatcacgtcggggcagttagcaccaaccgcttctgcaacttcttcccagtgattcgcctttagatttccacggttaagagcgta  18445400                                                                --------->DEAR3(1)                                                                ------->GAMYB                                                               --------->DEAR3(2)                                                               <------------AtMYB77                                                      <---------DEAR3(1)                         ----                                                      <---------ANAC46                           <---                                                     <---------LBD16                            <----                                                   --------->ANAC58                            <-----                                                   --------->ANAC58                            <-----    ---------->ID1                                 --------->ANAC46                     <------NtERF2 ---->SPL7                                         <---------DEAR3(1)                  <---------MYB46(3) --ANAC58                              <---------HSFB2a(2)   --------->ARR14(2)       --------->ALFIN1 --ANAC58         --------->WOX13(1)   --------->HSFB2a(2)   --------->MYB52(1)       <---------ANAC46 ------>AtSPL8 <-----------HVH21<---------CCA1(2)<---------ALFIN1             ----------->HVH21<----- ---SPL7 --------->ZAT14     <------ZmHOX2a(2)  --------->ZAT2 --------->MYB46(3)  --------->ALFIN1 -->ZAT18<---------SPL7  <---------ZAT18--------->LBD16 <------NtERF2    --------->ARR11(3) --------- ------>AtSPL3--------->ANAC46------>ZmHOX2a(2) <---------ZAT2<---------At5g28300  <---------DEAR3(1)   ccatttgtctctgtacgcgtcaattagcgcgatcgtctcttccagagaccagcacggcggaggtaaccgcctagagttcttggacgcggtggggatggag  18445500                                                                                               ------         --------->CCA1(2)                                                                     <-----         <------ZmHOX2a(2)                                                                     <-----        <---------AGP1                                                    --------->ALFIN1     ------        --------->AGP1                                                <------NtERF2           <------        --------->ARR11(3)            ------->TEIL                  <---------ANAC58          ------>ZmHOX2a(2)        <---------ARR14(2)         --------->ANAC46                 <---------ANAC46         <------ZmHOX2a(2)        --------->ARR14(2)      ----------->HVH21                   <---------ANAC58        ---------       <---------CCA1(2)      <-------GAMYB                        --------->ATERF1(1)      <-------- <----------DOF2             <------MYB46(1)                     <---------DEAR3(1)         ------->TEIL ----->ATERF1(1)     --------->At4g35610                         --------->ALFIN1     --------->ALFIN1 ---NtERF2------>ZmHOX2a(2)  <------MYB83<-----------TGA1     <-----------RAV1(1)---------->DOF2----- -----RAP2.3(1)      <---------ZAT2--------->ANAC58       <---------ARR11(3)  --------->At4g35610 ----DEAR3(1)<-----------RAV1(1)--------->WRKY12--------->At4g35610<---------LBD16 --------->DAG2 <-- ----RAP2.3(2)       <---------At4g35610 <-----------HVH21--------->ARR11(3)  <---------At4g35610 --- ----RAP2.3(3)       --------->ZAT2--------->ANAC58   <------ZmHOX2a(1) --------->ALFIN1 <---------WOX13(1) >ALFIN1<---------ARR11(3)  --------->MYB59     <---------At4g35610<------NtERF2 --------->MYB52(1)   gcgctcttcagatctgtgttggaagctggttcggttgacgcatcgtcatgagcggaggaagataatggtggcgggaggggagctaaaggtgatggatccg  18445600      ------>ZmHOX2a(2)                                                      ------>ZmHOX2a(2)    <---------ARR14(2)         ----------->HVH21                           <---------ARR14(2) --->ANAC55(2)                ------>ZmHOX2a(2)                            --------->AGP1 ----HSFB2a(2)               <------ZmHOX2a(2)                             --------->ARR14(2) ----ANAC55(2)              <---------ARR14(2)                             <---------ARR11(3) --->HSFB2a(2)            --------->LBD16                                  --------->ARR14(3) ---LBD16<---------MYB46(3) --------->ARR14(2)        >>>>>>>>>TBF1        <---------ARR14(3) >ARR14(2)            <---------ARR14(2)              ------------------------>ANAC81 -ARR14(2)     <---------At4g35610             <------------CBF            --------->ARR11(3) ---->LBD16 <-------TEIL<---------LBD16      --------->AHL20(2)            <---------AGP1 -------ARR14(2)      --------->ARR14(2)     <---------AHL20(2)    ---------->DOF2 ------>ARR14(2)      --------->GLK1(2) <------ZmHOX2a(2)    ---------->DOF2<------ZmHOX2a(2)      <-   gaattggatcgtggttcatcggagaatccggatcggacatggatcaaaaaattgaagaagaaggaaagaaaaagacagatcttgtgaaggaagagaaatg  18445700                                 --------->ANAC55(2)                                 --------->ANAC55(1)                          <---------MYB46(3)                        --------->ATERF1(1)                        <------NtERF2                       <---------ORA47(2)                       <---------ATERF1(1)                       <---------DEAR4(2)                       <---------RAP2.3(1)                       ------>NtERF2                                                            <----                       <---------ERF1                                                           <----                      <---------RAP2.3(2)                                                       <----                      <---------RAP2.3(3)                                                       <----                      --------->DEAR3(1)                                                       <-----                      <---------ATERF1(2)                                                  <---------ANAC58                      --------->ATERF1(2)                                                  <---------ANAC58                      <---------DEAR3(1)                                                   --------->ALFIN1                      <---------ANAC46                                                     <------MYB46(1)                     --------->RAP2.3(1)                                                  --------->MYB111(1)                     <---------ABI4(1)                                                    --------->MYB55(2)                     --------->ATERF1(1)                                                  <---------MYB46(3)                     <------NtERF2                                                        --------->MYB111(2)                     ------>NtERF2                                                        <---------DEAR3(1)                    <---------ATERF1(1)                                                  <---------ANAC46                    <---------RAP2.3(1)                                            <---------YAB1----                   <---------DEAR3(1)           --------->ARR11(3)              <---------YAB1 <-----                   <---------RAP2.6(2)        ----------->ARR10              <---------SPL7<------MYB83             <---------DAG2<-------GAMYB  --------->HSFB2a(2)               <---------ANAC58  <------             <----------DOF2     --------->ANAC46  --------->DAG2           <---------ANAC46 <-------            <---------ANAC58     <---------ANAC55(2)                        <---------ANAC58 --------            <---------ANAC58     --------->ANAC58 --------->MYB52(1)  <------ZmHOX2a(1)  --------->ALFIN1  ---------->DOF2  <---------RAP2.3(2)    <---------HSFB2a(2)    --------->ALFIN1--------->YAB1------ ---------DOF2    <---------LBD16--------->ANAC58--------->CCA1(2)  <---------ANAC46<---------ICU4<--   gctgtaatgcgatggcttttcgcggcggcgattgcacgtaatatcgagaagataagggagagagagagtggaggagaggcgtatgataatggtgggtggc  18445800                                                                      <------MYB46(1)                                                                      --------->MYB55(2)                                                                      <------MYB83                                                                     <---------DEAR3(1)                                                                     --------->ALFIN1                                                                     <---------AtMYB61                                                                  --------->MYB55(2)                                                                  <---------MYB46(3)                                                                 <---------ANAC46                                                                <------NtERF2                     ---                                                                --------->ATERF1(1)               <--                                                               <---------SPL7                     <--                                                              <---------ANAC58                    ---                                                              <---------ANAC58                    <--      ----------->GT1                                         <---------ANAC46        <---------ANAC46     <---------TOE2(3)                                        <---------DEAR3(1)    <-----------HVH21     <---------TOE1(3)                                       <------NtERF2         --------->DEAR3(1)     --------->DAG2                                          <---------LBD16 <---------ZAT18      --- <------ZmHOX2a(1)                                         --------->ALFIN1 <-----------TCP11(1)  <-- -----ANAC46                                               <---------DEAR3(1)<------NtERF2        --- -----DEAR3(1)                                            --------->ATERF1(1)--------->ZAT18     <--- -----ANAC58                                             --------->MYB55(2) ------>NtERF2        <--- -----ANAC58                                             <---------MYB46(3)<---------PCF2        ---- -NtERF2                                                <---------DEAR3(1) <---------RAP2.3(3)   <--- ----->LBD16                                            --------->ALFIN1--------->ALFIN1         <--- ----LBD16                          ----------->GT1     <---------AtMYB61<---------MYB46(3) --------- ---ATERF1(1)                       <------MYB46(1)   <---------ANAC46<---------MYB46(3)    --------- --DEAR3(1)                 --------->At4g35610      <---------DEAR3(1) <---------ANAC46    --------- ->ALFIN1             ----------->ARR10   ---------->DOF2--------->ABI4(2)<------NtERF2     --------- --->ATERF1(1)     <---------ANAC46 <------MYB83    <---------LBD16  --------->MYB111(2)   --------->SPL7 ----NtERF2  --------->CCA1(2)    <--------P   <---------DAG2--------->ATERF1(1)<---------ALFIN1 ----   ggaggataaggttagatagaagcgtagattagcagagttggtaataaagccttatgcggtggtggcggagggtggtgggggcacaccgtcgtggacgaca  18445900       --------->ICU4     --------->YAB1    --------->ICU4 ---->MYC3                                                        --------->ANAC58               <--- -----MYC3                                                        --------->ANAC46               <--- -----MYC2                                                        --------->ANAC58               <--- ---->MYC2                                                        ------>MYB83                   ---- -----MYC4                                                        ------>MYB46(1)                ==== ---->PIF5                                                      --------->AtMYB61       <------MYB83 -----PIF5                                                      <---------ALFIN1       --------->MYB111(2) ---->MYC4                                                --------->ANAC58            <--------P ==== ------ANAC46       --------->ARR14(2)                    --------->ANAC58          --------->ATHB12 ------ANAC55(2)    <---------ARR14(2)            --------->At4g35610            --------->YAB1  <--- ----->O2    <---------YAB1                       <---------At4g35610  <------NtERF2<---------MYB46(3) ------TGA1a<---------ARR11(3)                  <---------RAP2.6(2) --------->MYB46(3)=============== ------O2  --------->YAB1                    --------->DAG2   ------>NtERF2      <---------ICU4  ==== >ANAC58-------->HAHB4                ----------->GT1  <---------REM1(1)        --------->ICU4   <--- -->HVH21 <---------YAB1         <---------AHL20(2)  --------->At4g35610      --------->YAB1   <----- >ANAC46--------->YAB1           --------->AHL20(2)  <---------At4g35610 --------->ZAT14<------MYB46(1) >ANAC58<---------ICU4------>ZmHOX2a(2)     ---------->DOF2  --------->RAP2.6(2)<---------YAB1 ------ ----->TGA1a--------->ARR11(3)   --------->AHL20(1) <---------MYB46(3)------>NtERF2<---------YAB1----   cgtggaataataatgatatttggatcggtgtgaaataaaatagagaaaaagcggctgatgaagccaccaagccaccgtagtcatcatggttggaggctaa  18446000                                    --------->ZAT18                                 <---------MYB46(3)                                 <------MYB46(1)                                 <------MYB83                             <---------ANAC46                             <---------ANAC58                          <---------DEAR3(1)                          --------->ALFIN1                        <------MYB46(1)                        <------MYB83<---------ZAT18                       --------->MYB111(1)                       --------->MYB46(2)    <---------ANAC55(1)<---------MYB46(3)    <---------ANAC58   --------->MYB111(2)    <---------ANAC58   --------->MYB55(2)    <---------ANAC46   --------->MYB52(2) ------ANAC58          <---------AtMYB61                                                 <---------ANAC46 ------TGA1a          <---------MYB55(1)                                  <---------AHL20(2) ------ANAC46         <--------P--------->ALFIN1                          --------->AHL20(2) ----->TGA1a         <---------MYB52(1)                      <----------DOF2 --------->ICU4 ================================MYC_MYB                    <---------MYB52(1)<---------ICU4 =====================================MYC_MYB              <---------RAP2.6(3)--------->YAB1 <------- ------ANAC58       ------------>AtMYB15                 ----------------->AGL1          <---------ANAC58 ======MYC_MYB  <---------PCF5<-------GAMYB              <-----------------AGL2          <---------ANAC58 ==============================MYC_MYB                   ============================================ ------O2    --------->ANAC55(2)<---------AtMYB61        <-----------------AGL3 <---------YAB1 ----DOF5.7(2) ----------->HVH21<---------DEAR3(1)       ---------->ID1  <---------WOX13(1)<------NtERF2 --->MYB52(1)--------->ANAC46<---------ANAC58   --------->MYB46(3)  <---------At4g35610  <---------RAP2.6(2) ----->O2   <---------LBD16 <------NtERF2     --------->MYB52(1)<-----------RAV1(1)     ---------->ID1   cgtgagccgtgttatacgggaccggtaggtggcgttggtggacttagcgaaccgctcttgccgtttttggggctgattaattatgtttttggcgtctttc  18446100                                            <---------AHL20(2)                                     ----------->GT1                                   ---------->DOF2                                  <------ZmHOX2a(1)      --------->YAB1                                <---------TOE2(3)  <---------ARR11(3)                         <XXXXXXXXXXXXXXXXXXXXMIR830    <---------ATHB12                         <-----------------AGL1    --------->ARR11(3)--------->ATHB12                         <-----------------AG <---------YAB1     --------->ATHB12    <-----------GT1    <---------MYB52(1)  --------->AHL20(2)   --------->ICU4      <---------TOE1(3) ---DOF2    <----------DOF2<----------DOF2 <---------AHL20(2)   <---------YAB1      <---------TOE2(3) ==========================================MADS_MADS  --------->WOX13(1)        <----------DOF2   attttttgacttctcttttgcattcgtttctttttaggaaagttatttattaatatctatcatgagattattgattcgtttgatttaaggcttcaaaccc  18446200  Previous    Next  AGI:  At2g44730.1    Description:  transcription factor. similar to hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana] (TAIR:AT3G24860.1); similar to MADF; Homeodomain-like [Medicago truncatula] (GB:ABN05928.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain MADF (InterPro:IPR006578) Range:  from: 18444408    to: 18445640    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g44735.1    Description:  similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G18720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15899.1) Range:  from: 18445698    to: 18447126    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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