Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <---------ICU4                         -------->ATHB1                         --------->ATHB51                         --------->ATHB12                        <---------ATHB51                        --------->ICU4                        <---------AHL20(2)                  --------->ANAC58                  --------->ANAC46                  --------->ANAC58                <---------ALFIN1               --------->MYB46(3)              <------ZmHOX2a(2)              --------->CCA1(2)                                                        --------->AHL20(2)             <---------ARR14(2)                                                       --------->AHL20(2)             --------->ARR11(3)                    <---------AHL20(1)                 <---------AHL20(2)             --------->AGP1                  --------->YAB1                          <---------AHL20(1)             <---------ARR11(3)             --------->ZAT6                        --------->AHL20(2)             --------->ARR14(2)         --------->AHL20(2)   --------->ATHB12     <---------AHL20(2)      <---------SPL7    --------->AHL20(2)--------->YAB1     <---------ICU4       --------->AHL20(1) ----GLK1(2)--------->GLK1(1)          --------->YAB1      <----------DOF2---------->DOF2          <-   tctctcgtcgaacgagatccacccaaattattgtattcccaaaataatactaatatatgttctttattgctcttacaaaagaaataaaataattttaaaa  18431900                                                                                        <---------DAG2                                                                                        <----------DOF2                                                         <----------ID1           <---------DAG2                                                         ------->GAMYB            <----------DOF2                                                      --------->MYB52(1)      --------->ZAT14          --------->YAB1                --------->AHL20(2)   ---------->DOF2  <---------ZAT14      --         <-------TEIL        --------->AHL20(2)    --------->ANAC55(1)        <---------ZAT18     <--   --------->ANAC46        --------->YAB1   <---------------AtSPL8        --------->ATHB12 <--------- ----------GT1   <---------AHL20(2) ---------->DOF2--------->ANAC46      <-------TEIL<-----------GT1   tttactcgacattcgtaatgtaattgcaaaaataaaaacaaagaaaatagtactcgtaacggacaaagagtttgattcattgcactttaactttatcgat  18432000                                                                                                   --                                                                                         <---------TOE2(3)                                                             --------->YAB1              <---------TOE1(3)                                                            <---------YAB1              <---------DOF5.7(2)                                                            <---------AHL20(2)       --------->TOE2(3)                                                           --------->AHL20(2)        --------->TOE1(3)                                                           --------->AHL20(1)-------->ATHB1       <--           ----------->GT1                            <---------AHL20(2)     --------->ATHB12    ----          --------->YAB1                              --------->AHL20(2)    --------->ICU4<---------ANAC46       --------->YAB1              ----------->RAV1(1)<---------AHL20(1)    <---------ATHB51     <---    --------->YAB1                --------->ANAC46    --------->AHL20(1) --------->AHL20(2)      <--- --------->GT1                <---------At5g28300  --------->YAB1---------->DOF2     <----------DOF2< -------TOE2(3)              <-----------GT1      <---------ATHB51      --------->ICU4--------->DOF5.7(2) --------AGL1        ---------->DOF2      ---------->DOF2  <---------AHL20(1)--------->ATHB51    ----   gaggtaaaataatcagaaaaaaaaaaagaatttaccacaacacaaaaagacaataataaaatataataaaagtaatgaattattgaactttaacgtatag  18432100                                                                        <-----------HVH21                                                                       ----------->HVH21                                                                     ================================              --------->CCA1(2)                                      --------->TGA1a              --------->GLK1(2)                                      --------->ANAC55(2)              --------->ARR14(1)                                     <---------ANAC58             <---------ARR14(2)                                 --------->ALFIN1                -----             <---------GLK1(2)                               --------->DAG2                     -----             --------->ARR11(1)                             ---------->DOF2                     -----             --------->ARR14(2)                             ===================bZIP_DOF       -------    --------->HSFB2a(2)                                   <---------MYB52(2)  <---------At4g35610    <---------HSFB2a(2)                               --------->At5g28300   <-----------RAV1(2)------ ---->ZmHOX2a(2)                                     <---------ZAT6  <---------ANAC55(2)     -------- ----ZmHOX2a(2)       --------->ICU4               <---------ZAT14<---------SPL7           --------->ANAC58 ----->ARR11(3)   <-----------HVH21              <---------ZAT14<---------------AtSPL3     --------->ANAC58 ------AGP1----------->ARR10        <------ZmHOX2a(1)----------->GT1<-------TEIL      <---------At4g35610 ------ARR11(3) --------->MYB59 --------->ALFIN1 --------->ZAT14<---------------AtSPL8--------->ZAT2 ----------DOF2<-------TEIL ------->TEIL       <---------------AtSPL8<---------ANAC58 --------->At4g35610 ----->AGP1<---------YAB1  --------->MYB52(1)  <---------------AtSPL3================================   atctttcgagatgaagattcggtcacgatgaacggtgaggatgtattgtagagtactgtaactaaagtggtacgtgacacaggtgatcagctcaagtcaa  18432200                      <---------YAB1                  <----------DOF2               --------->LBD16               <---------RAP2.6(3)                                                           <-------               ------>NtERF2                                                           ------->TEIL        ------>ZmHOX2a(1)                     ------>ZmHOX2a(1)                        --------->ARR14(2) ---------->DOF2<------NtERF2             ------->GAMYB                                --------->GLK1(2) ====bZIP_DOF --------->RAP2.6(2)        --------->MYB46(3)                            <---------ARR11(1) ---->AtLEC2  <---------ATERF1(2)       -------->P                                     <---------ARR14(2) ---->ANAC58  <---------RAP2.6(2)       ------->TEIL          ------>ZmHOX2a(1)        <-----------ARR10 ---->ANAC58  --------->ATERF1(2)      <-----------GT1    <---------ALFIN1         <---------HSFB2a(2) --->DOF2---------->DOF2             <---------ATHB12   ------>ZmHOX2a(1)          --------->HSFB2a(2) --->WOX13(1)--------->RAP2.6(3)   ------>MYB83        <---------ALFIN1    <<<<<<<<<TBF1     <------- ->WRKY18(1) <---------LBD16       ------>MYB46(1)     *TSS------>ZmHOX2a(1)     ------>ZmHOX2a(1) ===================bZIP_DOF     --------->AtMYB61   ------>ZmHOX2a(1)  <<<<<<<<<TBF1 <---------CCA1(2)   gcagaaagtcctaaagccggctttataaatgaacaccaaatcaacctccttcttcctcctcctcctctcgcttcttcttcttcctctcgaatctgctttt  18432300                                             --------->ANAC58                                       --------->AHL20(2)                                 <---------ANAC58                                 <---------ANAC46                            --------->HSFB2a(1)                            <---------HSFB2a(1)                            --------->HSFC1(2)                                            -----------                      <---------LBD16  <---------AHL20(2)<---------ANAC46                 <---------ALFIN1                --------->TOE2(3)<---------ANAC58     <---------ANAC58        <---------ANAC58 <----- ---DOF2       ----------->GT1<----------DOF2--------->ANAC58                 <---------ANAC58 <----- --DAG2   <-----------TGA1  <---------HSFC1(2)        <---------ANAC58        <-------GAMYB <--------   cgcagtctatttcgtcatcgtaaattcggaagctttcgtatttaattaagcaaatggcttcgtattactctggttttttgggttgtgaagagccacactt  18432400                         <---------ALFIN1                      <---------ARR14(2)                      --------->ARR14(2)      --------->ARR14(2)                     <------NtERF2            <---------ARR11(3)                    --------->LBD16           --------->ARR11(3) >RAV1(1)          --------->ETT(1)          --------->GLK1(1) ----DAG2          --------->LBD16           <---------CCA1(2) -----DOF2        <---------LBD16            <---------GLK1(1)   --------->ATHB12 -ALFIN1      <----------DOF2               <---------MYB52(1)  --------->ICU4  ---------->DOF2   tttggaatcgtgttctctttgccggaaacaccttggtcttaactccgatatcttcatgtacaggtattgattcgattcaaactaaagcattaaactttca  18432500            ------>ZmHOX2a(2)           --------->CCA1(2)           <------ZmHOX2a(2)          <---------ARR14(2)          <---------ARR11(3)          --------->AGP1          <---------AGP1          --------->ARR14(2)                   <---------WOX13(1)          --------->ARR11(3)                <---------YAB1       <---------HSFB2a(2)              <------MYB83       --------->HSFB2a(2)         <---------AHL20(2)       <---------HSFC1(1)          --------->AHL20(2)                                <---------DAG2       <---------------AGL15      --------->AHL20(2)  <---------TOE2(3)              <----------DOF2      <-----------------AGL2  <---------AHL20(2)      <---------TOE1(3)     <----------ID1    --------->GLK1(2)     <---------YAB1<------MYB46(1)                    <------ZmHOX2a(1)   attgagtttctagatctggtttttttctataattcatttatttggtctgattgtttatggtttttgtgatttacagaggagacaaggctttttgtagcaa  18432600                                                                       ----------->GT1                                                                      --------->ANAC46                                                                     <---------LBD16                                                                 ------>ZmHOX2a(2)                                                                --------->GLK1(1)                                                                <------ZmHOX2a(2)                                                                <---------GLK1(1)                                                               <---------AGP1                                                               <---------ARR14(2)                                                               --------->ARR14(2)                   <                                                               <-----------ARR10                    -                                                      --------->ARR11(3)                            -                                                      --------->GLK1(2)--------->LBD16              -                                           --------->DAG2      --------->ARR14(3)                  --                                     ===================================HOX2a_HOX2a             -----                                     ==================================HOX2a_HOX2a              -----                                     <------ZmHOX2a(1)<---------ARR11(3)            --------->HSFB2a(2)                               <---------At4g35610   --------->CCA1(1)<---------HSFB2a(2)       <----  --------->ZAT14             ------->TEIL---------->DOF2      <---------ARR14(3)   <---------HSFB2a(2)  <---------ZAT14          <---------REM1(1)   ----------->GT1 <---------ARR11(3) <---------At4g35610  --------->REM1(2)      --------->At4g35610  ----------->GT1  --------->ARR11(3) --------->At4g35610 --------->ALFIN1    ------->TEIL  <---------TOE2(3) --------->RVE1(1)--------->HSFB2a(2)  ----------   cgagtgtagagaagaacagattgaatctgatgaagctaaggagagaaagtggaaaaaatcttcaagatctctccggaaaaattcttctgaaactaaagaa  18432700                  --------->ANAC58            <------------------SPL14           ------------------>SPL14           <---------ALFIN1        --------->ARR14(2)        <---------ARR14(2)       <------NtERF2     --------->RAP2.6(2)     --------->LBD16     --------->RAP2.3(2)    <------NtERF2 --------->ANAC58    --------->RAP2.3(1)    --------->ATERF1(1)    <---------LBD16   <---------ATERF1(1)   ------>NtERF2 --------->SPL1(2)   --------->ABI4(1)  --------->RAP2.3(3)  --------->RAP2.3(2)  --------->RRTF1(3)  --------->RRTF1(2)  <---------DEAR3(1)  --------->ATERF1(2)  --------->DEAR3(1)  <---------ATERF1(2) --------->ERF1  --------->SPL7 --------->DEAR4(2) --------->RRTF1(1) --------->ATERF1(1) --------->RAP2.6(1) --------->RAP2.3(1) --------->ORA47(2)         <---------HSFB2a(1) ---------ATERF1(1)        --------->GLK1(1) ----->NtERF2   --------->SPL1(1)                                   --------->ANAC58 -------->LBD16 <---------SPL1(1)       <---------ANAC58           --------->WOX13(1) -------->At4g35610        <---------GLK1(1)                 <---------------AGL15 ------->ANAC46 --------->MYB52(1)      <---------ANAC58    --------->ANAC55(2)                    <- ---->GLK1(2)<---------------AtSPL3     <---------ANAC46    <---------ANAC55(2)                    -- ---->ARR14(2) <---------SPL7      <---------O2            <-------TEIL        <----------DOF2    <-- -----ARR14(2) <---------SPL1(2) <-----------HVH21<---------HSFC1(2)--------->AtLEC2          <------ >DOF2--------->LBD16    <------ZmHOX2a(1)        --------->HSFC1(2)--------->ANAC58          -------   tccgccgccggaaacaccgtacggacaggaactctcgtcgtggcttagtagaagcttcagttacataatcaagcaaatagtctttttttcttctatataa  18432800  Previous    Next  AGI:  At2g44670.1    Description:  senescence-associated protein-related. similar to senescence-associated protein-related [Arabidopsis thaliana] (TAIR:AT4G17670.1); similar to unknown [Populus trichocarpa] (GB:ABK94365.1); contains InterPro domain Protein of unknown function DUF581 (InterPro:IPR007650) Range:  from: 18432255    to: 18433135    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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