Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->GLK1(1)           <---------GLK1(1)          --------->ARR14(2)          <---------ARR14(2)         <------ZmHOX2a(1) --------->At4g35610     ---------->DOF2   <-----------ARR10               --------->TOE2(3) ----------->RAV1(1)   --------->ARR14(2)       <------ZmHOX2a(1) ------->At4g35610     --------->GLK1(2)    --------->TOE1(2)                 <------ZmHOX2a(1) ------>ANAC58         <---------ARR14(2)--------->ANAC58                  <-----------RAV1(2) ------>ANAC58        <---------GLK1(2)  --------->ANAC58                  <---------LBD16        <--   cagcaccaaaaggatttgccaagagaatctgcttaagtttatcaagcctaggagaagcctcaacaagttccatattaccaggagcgattttgagaaccga  18410100                 <---------GLK1(2) <------ZmHOX2a(1)         <------MYB46(1)         --------->LBD16         <------MYB83           <---------LBD16          <------ZmHOX2a(1)       <---------ANAC46     <---------At4g35610        <---------TOE2(3)       ------>MYB83     <---------MYB46(3)    ------->TEIL           <------ZmHOX2a(1)            ------>MYB46(1) -----TEIL    --------->YAB1--------->At4g35610<------ZmHOX2a(1)    --------->YAB1    <---------YAB1   tacattgttgttggtatcagaaacttgtgcatctccaggaaaaattgaaggaggaataaggaacatggaattagaattaccaacaaatttgatagcataa  18410200                                                        ---------->DOF2--------------->AGL15                                                     <---------------AGL15                                                     ===================================MADS_MADS                                                     --------------->AGL15                                                     --------->TOE2(3) <---------------AGL15                                                     --------->TOE1(3)<-----------------AGL3                                                    ----------------->AGL1                      <---------GLK1(2)           <-----------GT1     ----------------->AGL3             ---------->DOF2      <------ZmHOX2a(1) ----------------->AGL2    <---------TOE2(3)       --------->ALFIN1<---------ARR11(3)------>ZmHOX2a(1)       ----------->GT1        --------->ANAC46   gtcttagacttggtgcaaagaacagcatcttcatcaggaagtcctctcaatgttaccctaaagagaatggatactaaattaagaaaccctaagacacaaa  18410300                                                                                               <-----                                                                                              -------                                                                                          <------ZmHOX2a(2)                                                                                         <---------ARR11(3)                                                 --------->GLK1(1)                       <---------ARR14(2)                                                 <---------GLK1(1)                       <---------GLK1(2)                                                 --------->CCA1(2)                       --------->ARR11(3)                                                <---------ARR11(3)                     ----------->ARR10                                          <---------YAB1                     --------->HSFB2a(2)                                     <----------DOF2                    <---------At4g35610  ------>ZmHOX2a(1)                                  <---------TOE1(2)                     --------->At4g35610------>ZmHOX2a(2)                  ---------->DOF2 ------->TEIL  --------->ARR11(3)   <---------At4g35610 --------->ARR14(2)     --------->YAB1           --------------->AtSPL8    --------->CCA1(2)    <---------HSFB2a(2)    -   tgaaaaatcaaaacaaacccaaaagcttcaaaatcgtacctttgatgaaagatatcagagacgagtttgtcatcagcttcaagaagaagtagatcctcgt  18410400                                           --------->CCA1(2)                                          <---------GLK1(2)                                          --------->ARR14(2)                                    --------->ARR14(2)                                    --------->ARR11(3)                                  <---------KAN4(2)                                  --------->ARR14(2)             <---------ZAT2   --------------->AGL15                                  <---------ARR14(2)             --------->At4g35610        *TSS                                  ---------->TaMYB80   <-----------GT1            <---------------AGL15                     --------->ARR11(3)   <---------ARR14(2) <-----------HVH21   ----------------->AGL2 ------HVH21       --------->ANAC58 <---------ARR14(2) --------->ZAT6       <---------ARR11(3)      < -->O2   --------->TOE2(2)     <---------ANAC46<---------TOE2(3) <---------At4g35610    --------->HSFB2a(2) ----->NtERF2      --------->ANAC58--------->GLK1(1)  <---------YAB1  ------>ZmHOX2a(1) <---------HSFB2a(2)   gaggcccaaaacatgggtgataagaaattggtagcgaatatccagatttgagatttatcactgcttcagctcctccaatttcttccattactagaaatca  18410500          --------->ANAC58          --------->ANAC58        <--------P     --------->LBD16    <---------ANAC55(2)    <---------ANAC46                  --------->ANAC58         --------->WOX13(1)   <---------LBD16             --------->ZAT14               <---------ATHB12      ------->TEIL ----------->HVH21        <---------At4g35610     --------->LBD16      ---------->DOF2   ----------->RAV1(2) -----------HVH21      ---------->DOF2--------->ANAC58       ------------>CBF   <---------ATHB12   aatgtcacgggtaagtaagcgacgattaagcagagaagtcaagaaatgtttccgaaaattcaaatcaattagacaaagacaaatgaatcaaacctgatgc  18410600                                                                                                <----                                                                                            <--------                                                                          <---------ZAT18   <--------                                                                    <---------ZAT2         <------NtERF2                                                                    <---------STY1(2)     ------>NtERF2                                                             --------->HSFB2a(1)         --------->ANAC46                  <------MYB83                               <---------HSFC1(2)        <---------ANAC58                <--------P                   <---------TOE1(3)--------->TOE1(2)        <---------ANAC58      --------->ARR14(2)                     <---------ANAC46<---------HSFB2a(1)    <---------ARR14(2)      ------->TEIL<------MYB46(1)         --------->ALFIN1   --------->HSFC1(2)  <---------TOE1(3)      <---------ARR14(2)         ------->TEIL<---------TOE2(3)--------->TOE2(2) <-----------RAV1(2) < --------->MYB52(1)         --------->MYB52(1) <------ZmHOX2a(1)    --------->ZAT2  --------->ARR14(2)   gaataacgaatcgtctgggtagggtccgaataacgaatcgcgaggttgaggataagagaaggaaccttcgagctagggctcttcaggtttcgcgccttat  18410700              <------NtERF2              --------->ANAC58                                          ----------->GT1 --------->ANAC58   <---------------AGL15                                             ---------->DOF2    --------->ANAC58  <-----------------AGL2                                        ---------->DOF2         ----------->GT1  <-----------------AGL3                                       <---------WRKY45--------->AHL20(2) -----YAB1    --------->ANAC58              ---------->DOF2    <---------WRKY12--------->AHL20(1) --DOF2      ------>NtERF2             <---------ZAT18         <---------WRKY38(1) <-----------GT1 -DAG2      <---------ANAC46    <---------CCA1(2)            <-----------HVH21 <---------AHL20(2) -----------GT1        <---------AHL20(2)  ---------->DOF2  <----------ID1    --------->AHL20(2)   tttagccattttaggcgcgtaagttttaattctcttatctgggcacaaaggcccaagttaatgggtcaaagaaaaggaaattttattaccaagtaaaaaa  18410800                    --------->ANAC58                    --------->ANAC58                   --------------->AGL15               --------->ZAT18                    ------->GAMYB            <---------ANAC58             --------->LBD16            <---------ANAC46           <---------LBD16            <---------ANAC58         <-----------GT1  --------->ANAC58                             <-          <---------ANAC46          --------->KAN4(2) --------->ANAC58                   ----------->GT1    <---------AHL20(2)         --------->ICU4    --------->MYB46(3)                   ---------->DOF2   cttaagttaattttgtgtgtgcaagaaatagcaacgattataccggagataaccacaagtactacaatagttgtctgtttatcaacttaaaaggtttaat  18410900         --------->AHL20(2)         <---------AHL20(2)                     --------->REM1(1)        <---------ATHB12                    --------->At4g35610    --------->MYB46(3)                    --------->MYB46(3)   --------->ANAC58                     <---------ALFIN1   --------->ANAC58                     --------->ARR14(2)  --------->WOX13(1)                --------->ANAC58       <---------CCA1(2) ----------HVH21  --------->DEAR3(2)--------->ANAC58--------->WOX13(1)                   <----------DOF2   atgtcaaccaataaaatcaaaccggcttcgttcatcgaacccaaaccgctgcatcaatctcatctctagccttcttgtatagctcgagcctctttgcaca  18411000  Previous    Next  AGI:  At2g44580.1    Description:  protein binding / zinc ion binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO38691.1); contains domain SISTER CHROMATID COHESION PROTEIN DCC1-RELATED (PTHR13395) Range:  from: 18408954    to: 18410492    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g44590.1    Description:  ADL1D; GTP binding / GTPase. Identical to Dynamin-related protein 1D (DRP1D) [Arabidopsis Thaliana] (GB:Q8S3C9;GB:O80499;GB:Q9FNX3;GB:Q9FNX4); similar to ADL1 (ARABIDOPSIS DYNAMIN-LIKE PROTEIN), GTP binding [Arabidopsis thaliana] (TAIR:AT5G42080.1); similar to ADL4/ADLP2/DRP1E/EDR3 (DYNAMIN-LIKE PROTEIN 4), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT3G60190.1); similar to ADL1C/ADL5 (DYNAMIN-LIKE PROTEIN 5), GTP binding / GTPase [Arabidopsis thaliana] (TAIR:AT1G14830.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71045.1); similar to hypothetical protein OsI_033530 [Oryza sativa (indica cultivar-group)] (GB:EAY79571.1); Range:  from: 18410932    to: 18414037    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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