Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <---------SPL7                <---------SPL1(2)              --------------->AtSPL3            ------------------>SPL14                                   ---------->DOF2            <-----------HVH21                                      <---------TGA1a         ----------->RAV1(2)                                       --------->ZAT2         --------->ZAT2                                            <---------ZAT2         <---------TGA1a                                           <---------O2         =============================================bZIP_DOF     --------->TGA1a         <---------O2                                              ----------->RAV1(2)         --------->TGA1a                                           ===============bZIP_DOF         <---------ZAT2                                            --------->O2         --------->O2                                            <---------ALFIN1        -------->P                                             --------->TCP15(2)        ------>MYB83  <<<<<<<<<<<<<<<<<LFY                     --------->PCF5        ------>MYB46(1)--------->ARR11(3)                     --------->PCF2                      ---       --------->MYB55(1)                                     <------NtERF2                       ---       <---------ALFIN1<---------ARR11(3)                     <---------PCF5               --------->LBD16      --------->DEAR3(1)                                      ----------->TCP11(1)        <---------ANAC46      --------->MYB46(3)                                     <-----------TCP11(1)         <---------ANAC58      <---------MYB55(2)            <------ZmHOX2a(1)        <---------ATERF1(1)          <---------ANAC58      <---------MYB111(2)        <-----------RAV1(2)         ------>NtERF2          --------->ALFIN1     --------->ANAC58--------->ANAC58                  --------->GLK1(2)     ------>NtERF2--------->ANAC55(2)     --------->ANAC58--------->ANAC46      <----------DOF2  --------->ALFIN1 --------->LBD16    ----- -------->bZIP60(1)  --------->ANAC58      ==================================bZIP_DOF  <---------ARR14(2)   tggcatcacccacctgtccgtacaagacattgggctcaggatgggctttaatgagataatcggtggcccacctgagagccgcgagggtgtttccgtgctc  18402900                                        --------->STY1(2)                                        --------->ZAT2                                        <---------STY1(2)                                        <---------ZAT2                 <---------ARR14(2)                                       --------->ANAC58                --------->ARR14(2)                             --------->ZAT6                           --------->GLK1(1)           --------->At4g35610         --------->ANAC58               <---------GLK1(1)           <---------At4g35610         --------->ANAC46         ---------->DOF2 -------->HVH21              --------->ANAC46               --------->ANAC58 --->ZmHOX2a(1)             <---------ZAT14                 --------->ANAC58                      --- ------>RAV1(2)             --------->ZAT14                <-----------------AGL1                 ---   ctgatgggccttaagctgtgattccatctctacactactccaagctagcattgttgttgtgaacgctaaaggaaatccgaacttcatattatctccagca  18403000                                                             <---------AHL20(2)                                                             <---------ICU4                                                            --------->ICU4                                                            --------->AHL20(2)                                                       --------->ANAC58                                                       --------->ANAC58                     ------->TEIL                      --------->ANAC55(2)                   --------                 <---------ARR11(3)                    --------->ANAC46                      <-------                 --------->ARR11(3)            <---------AHL20(2)                       --------->AHL20(2)           --------->LBD16                  --------->AHL20(1)                       <---------ICU4         <---------LBD16        <---------YAB1 --------->AHL20(2)             ---------->DOF2--------   <-----------GT1<------ZmHOX2a(2)         <---------AHL20(1)      --------->YAB1   --------->YAB1 -------->GT1   --------->At4g35610         --------->AHL20(2)      <---------ICU4  --------->ICU4 ------>YAB1<-----------HVH21 <-----------GT1  <---------AHL20(1)  <-------TEIL   --------->YAB1    -   tcgtaataccctccggtgagatcaacctatttttacaattggcaaatattttatttcaagtaataaatattcattacagaaaaagaataatgaaataaaa  18403100                                                 <---------ARR14(2)                                                 --------->GLK1(2)                                                 <-----------ARR10                                                <---------ARR14(2)                                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                            --------->ZAT18                                            <---------ZAT18                                            <---------ZAT14                                            --------->ZAT14                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                           xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                           xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                         xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                        <xxxxxxxxxxxxxxxxsmallRNA(i)                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                      <xxxxxxxxxxxxxxxxsmallRNA(i)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                  <xxxxxxxxxxxxxxxxsmallRNA(i)                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                --------->HSFC1(2)                                <---------HSFC1(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                               xxxxxxxxxxxxxxxx>smallRNA(i)                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                               <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                             xxxxxxxxxxxxxxxx>smallRNA(i)                            <xxxxxxxxxxxxxxxxsmallRNA(i)                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                --------->LBD16                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                              <---------HSFB2a(2)                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <-----------GT1           --------->HSFB2a(2)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)--------->ARR14(2)                      <---------LBD16  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(i)              <xxxxxxxxxxxxxxxxxxx ->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->ARR14(2)              --------->ANAC58 --AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------GLK1(2)   <xxxxxxxxxxxxxxxxsmallRNA(i)  --- ->AHL20(1)<-----------GT1--------->At4g35610<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)--------->ANAC58<---- -------->ARR11(1)  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)------>ZmHOX2a(1)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   tagatttggatattaaacttacatgagcatcagaaccatctctgagtgcagaatctcctctccatataactctttggtccaaaggcaattttccggagcg  18403200                                                                                  --------->YAB1                                                                     --------->ANAC46                                                                     --------->ANAC55(1)                                                                     --------->ANAC58       --------- --------->At4g35610                                                 --------->ANAC58  --------->ZAT6 <---------At4g35610                                         --------->At4g35610  <---------ICU4 xxxxsmallRNA(se3)                       --------->ATHB51--------->ARR14(2)      <---------YAB1 ------>WRKY38(1)             <---------ARR11(3)        --------->ARR14(2)       --------->ICU4 ---GAMYB     ---------->DOF2 --------->ARR11(3)        <---------ARR14(2)     --------->YAB1   ttgagcttcgaaatacaaaagactcttcgtaagagcttctccataatttgaatttgcagaaactgctccacaagtaatcgataataataacacaatgcaa  18403300                                                                                                   <-                                                                                                   <-                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                             <-------                                                                                             <-------                                                                              ------->TEIL   --------                                                                              <-------TEIL <---------AHL20(2)                                                                          --------------->AtSPL3   --                                                                          <---------------AtSPL8 ----             <---------REM1(1)     --------->ANAC58                       --------------->AtSPL8 <---      >>>>>>>>>ARR2                --------->ANAC46                <---------ARR11(3)      <---------     --------->ATHB12              --------->ANAC58                --------->AHL20(1)      --------->AHL20(2)    <---------YAB1           --------->CCA1(2)           <-----------GT1  <---------------AtSPL3 <--- <----------DOF2       <---------YAB1           --------->ANAC58   <---------AHL20(1)    <-----------TBP >AtLEC2  <---------YAB1  <---------YAB1        --------->ANAC58   --------->AHL20(2)   ------->TEIL   atgcttttgattgtgatgaagcattgtgatgatatacaagacatggttgtaagctatttttactgacaaaatattagacgtacatatatgtatatatata  18403400                                                 <-----------GT1               <---------------AtSPL3                                           --------->AHL20(2)                  <---------------AtSPL8                                         <---------AHL20(2)                  <------------CBF                                         <-----------TBP                    --------->ATHB12                                         --------->AHL20(2)                --------->AHL20(2)                                       <---------AHL20(2)                  <---------YAB1         <---------ARR14(2)            <-----------TBP                  =============================         --------->KAN4(2)             --------->AHL20(2)           <---------ARR14(2)       <------- --------AHL20(2)                    <-----------TBP                ------->TEIL            <-------- ----------TBP                       --------->AHL20(2)             <---------ARR11(1)      --------- ----AHL20(2)                 <---------ICU4 --------->AHL20(2)     --------->ARR14(2)      ========= --->AHL20(2)  <-----------ARR10     <---------AHL20(2)            <---------CCA1(2)      ------>ZmHOX2a(2) ------TBP     ------->TEIL   --------->YAB1 <-----------TBP     <---------ANAC55(1)<---------ANAC55(2) ----TBP --------->ARR14(2)  <---------ATHB12<---------AHL20(2)  --------->ANAC55(2)<---------ANAC46 --AHL20(2)    <---------ARR14(2)  ----------->TBP               <---------ANAC58   <---------ANAC58 ->AHL20(2)   <---------ARR14(1)   --------->AHL20(2)            <---------ANAC58   --------->ANAC55(2) ------->AHL20(2)       --------->ANAC55(2)<-----------TBP       <---------ANAC55(2)<---------ANAC58 ----->AHL20(2)<---------ARR11(1) --------->AHL20(1)            <---------TOE2(3)  <-------TEIL ------AHL20(2)--------->ARR14(2) <---------ARR11(3)    ------>ZmHOX2a(1)  <---------AHL20(2)<------- --TBP  <----------TaMYB80   --------->ICU4<---------AHL20(2)  <-----------GT1<---------WOX13(1) --------TBP  <---------CCA1(2)   <---------AHL20(1)   --------->TOE2(3)<-----------------AGL3   tatatatagcatattcgtatctacatatgtaatcaatatatatatatatatatacttccttatatttacgtatctatataattggtacgtgatccctttt  18403500                                              <------------CBF                                             <--------ATHB1                                             <---------ICU4                                             -------->HAHB4                                            --------->ICU4                                            <---------ATHB51                                            <---------YAB1                                            --------->AHL20(2)                                     --                                   --------->HSFB2a(2)                                             <-                               <---------SPL7--------->ATHB51                         --------->TOE2(3)                             --------------->AtSPL3                             ------->TEIL      ---    ---------->DOF2    --------->WOX13(1)   <---------AHL20(2)    <----------DOF2     --------->YAB1 =======MADS_MADS    ------------>CBF     --------->YAB1------>ZmHOX2a(1)      <---------CCA1(2)----- --DAG2     --------->AtLEC2 --------------->AtSPL8   ------>ZmHOX2a(2)    <------ZmHOX2a(1) <------- -------AGL15        <---------YAB1<---------HSFB2a(2)============================HOX2a_HOX2a-------- ------>AGL15     <---------AHL20(2)    --------->AHL20(2)        --------------->AGL15      -------- =================================================================================MADS_MADS  -------- ---DOF2--------->ARR11(3)  --------->At4g35610 --------->YAB1    <---------------AGL15      --------   tcagtataaagaccatgcatataatcaatgagcggtaccagaaaaaataattgtgatcctcttattcgctatatagaggatgtatctatcttagtaagta  18403600        <---------DEAR3(1)      --------->MYB52(1)     ----------->TGA1                                             <---------AHL20(1)     ----------->HVH21                                            --------->AHL20(1)             <---     <---------ATHB12                                             <---------AHL20(2)             <--- <---------YAB1                                          <-----------GT1                        <---- ------------>CBF       <---------ANAC58              <---------ARR11(3)                      ------- ------->YAB1           <---------ANAC58              --------->ARR11(3)                    <-------- --------ICU4         --------->ARR11(3)              <---------AHL20(1)                    <-------- ------>ICU4         --------->CCA1(1)           --------->AHL20(2)                      --------->DOF5.7(2) ---->YAB1           --------->RVE1(1)      ----------->GT1      --------->AHL20(2)     <----------DOF2 --ANAC55(2)  --------->HSFB2a(2)         --------->At4g35610<---------YAB1             --------->TOE2(3) ->ANAC58     <---------HSFB2a(2)   ----------------->AGL1   ------>ZmHOX2a(1)    <------ZmHOX2a(1)-- ->ANAC58    <------NtERF2        <---------WRKY18(1) --------->AHL20(1)          =================== ->ANAC55(2)------>NtERF2        ----------->HVH21   <---------AHL20(2)      --------->YAB1<---------DOF5.7(2) --->GT1<---------DREB2C(2)   ------>ZmHOX2a(2)  <---------AHL20(2)     <---------YAB1  --------->TOE1(3)   ataatcaatgacggtgccagaaaatatcgtgatccatgaccatgagcggaaataaatattttcctgattatattctgaataataggattactttaacgat  18403700                                                                <---------ZAT14                                                                <-------TEIL                                                            <---------------AtSPL8                                                            <---------------AtSPL3                                                            --------->DAG2                                                           ---------->DOF2                       ----                                                       --------->LBD16                       <-------        <---------ARR11(3)                            --------->LBD16                     <---------AHL20(2) ------WRKY38(1)                                      --------->ANAC46                   --------->AHL20(2) ------WRKY12                                        --------->LBD16                     <---------AHL20(2) --ZmHOX2a(2)            ----------->RAV1(1)         <---------HSFB2a(2)              --------->AHL20(2) >GAMYB --------->ARR11(3) <---------ALFIN1          --------->HSFB2a(2)             <---------AHL20(2) -TOE1(3)             --------->ANAC58              <---------LBD16       --------->REM1(1)  -------- -TOE2(3)    <---------AtLEC2                   --------->GLK1(1) ----------->GT1 <---------AHL20(1) ------------->AtSPL8 --------->ANAC46          <---------GLK1(1) <---------ZAT6  --------->AHL20(1) ==HOX2a_HOX2a        --------->ANAC58       <---------ATHB12   --------->ZAT14  <---------CCA1(2)<--   caacgtactaaatcttcatggaataggcaacacatttgaaagtttcaatgaattccccgaaaaaagtacagttactacaacttatatattatttattaat  18403800  Previous    Next  AGI:  At2g44570.1    Description:  ATGH9B12 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B12); hydrolase, hydrolyzing O-glycosyl compounds. Identical to Endoglucanase 15 precursor [Arabidopsis Thaliana] (GB:O80497); similar to ATGH9B11 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B11), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G44560.1); similar to ATGH9B9 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B9), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G44540.1); similar to ATGH9B10 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B10), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G44550.1); similar Range:  from: 18401318    to: 18403344    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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