Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             <---------O2                                           --------->TGA1a                             --------->ZAT2                                           --------->O2                                <---------At4g35610                                           <---------TGA1a                             <---------ZAT2                                         <---------ALFIN1                       <---------PCF2                                        <---------ZAT18                         --------->PCF5                                       --------->PCF5                           --------->TCP16(1) ----ZmHOX2a(1)                       <------NtERF2                             --------->ZAT18 ----->ANAC46                         <---------PCF5                            --------->TCP15(1) -->SPL7                              --------->PCF2                           <---------TCP15(2) --SPL1(1)                           <---------ATERF1(1)                       ----------->TCP11(1) -SPL1(2)                            ------>NtERF2          <---------ANAC58  <---------MYB46(3) -SPL7    <---------TOE2(3)          <-----------TCP11(1)   <---------ANAC58 --------->ALFIN1 ---->AtSPL3       ==================================bZIP_DOF  <---------ARR14(2)      --------->At4g35610 ------AGL1        <----------DOF2  --------->ALFIN1  ----------->HVH21    <---------MYB46(3) <------ ----->SPL14<------ZmHOX2a(1)  --------->GLK1(2)  --------->ZAT18         --------->ALFIN1    -------   ggacattaggctgaggatgggctttaatgagataatcggtggcccacttgagagccctgagagcgtttcccttctcgtggtgggccctaagctgtgatgc  18397800                                           ------->GAMYB                                          --------->ANAC58                                          --------->ANAC58                                        ------>NtERF2                                        --------->MYB52(1)                      <---------ZAT18                                       --------->DEAR3(1)                       --------->ZAT18                              <---------ANAC58                                 <-----------GT1  -----                --------->STY1(2)   --------->ANAC58                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                <---------STY1(2)   --------->ANAC58                      --------->YAB1      <------ZmHOX2a(2)                --------->ZAT2<---------ANAC58<---------GLK1(1)       --------->LBD16        --------                <---------ZAT2<---------ANAC46--------->GLK1(1)      --------->ANAC58       ---------               --------->ANAC46     --------->ANAC46                 --------->ANAC46   <-----------HVH21 ---bZIP60(1)  --------->ANAC58   <---------DOF5.7(2)                --------->ANAC58  --------->LBD16 -->bZIP60(1)  --------->ANAC58 --------->DOF5.7(2)                 <---------LBD16  <---------LBD16   catctctatattgctccaagctagcattgttgtcgtgaacgccaacggaaatccaaacttcatgttgtctcccgcatcatagtaccctccggtgagatca  18397900                                                                                                    -                                                                                                  <xx                                                                                                 <xxx                                                                                               xxxxxx                                                                                              xxxxxxx                                                                                            <xxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                      --------->AHL20(2)                                                                                      <---------AHL20(2)                                                                                      <xxxxxxxxxxxxxx                                                                                      <xxxxxxxxxxxxxx                                                                                      <xxxxxxxxxxxxxx                                                                                     <xxxxxxxxxxxxxxx                                                                                   ----------->GT1xxx                                                                                  ----------->GT1xxxx                                                                                  <---------ZAT6 xxxx                                                                                <---------ANAC46<xxxx                                                                                <---------ANAC58<xxxx                                                                                <---------ANAC58<xxxx                        --------->AHL20(1)                                     xxxxxxxxxxxxxxxxxxxxxx          <-----------GT1                                                  <---------ARR14(2) <xxxxxx ---->WOX13(1)          --------->AHL20(2)                                 --------->ARR14(2) <xxxxxx ->ARR11(3)             <---------AHL20(1)                                <------ZmHOX2a(1) <-------- >At4g35610      ----------->GT1                <-------TEIL          ---------->DOF2<xxxxxxxxxxxxxxx   atctatacatttttacaaatagcaaatattttagttgaacttgataaacatacattacaaaaaaaaaaaaaaaaaaggatttgagtgttaaattacatga  18398000              <xxxxxxxxxxxxxxxxsmallRNA(i)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        <xxxxxxxxxxxxxxxxsmallRNA(i)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <---------HSFC1(2)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      --------->HSFC1(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <---------ARR14(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    --------->ARR14(2) --------->ARR14(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   xxxxxxxxxxxxxxxx>smallRNA(i)                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                          <---------HSFC1(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                          --------->HSFB2a(2) -------->At4g35610    <---------ARR14(2)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxsmallRNA(se3)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxx>smallRNA(si3)                       <------NtERF2 xxxxxxxxxxxxxxx>smallRNA(fl3)        <-----------GT1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxsmallRNA(si3)------>ZmHOX2a(1)        --------->ANAC58 xxxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   --------->HSFC1(1) xx>smallRNA(i)   --------->At4g35610xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxsmallRNA(le3)  <-----------ARR10        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxsmallRNA(si3)  --------->GLK1(2)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxsmallRNA(le3)<---------GLK1(2)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxsmallRNA(le3)<---------ARR14(2)      <---------MYB46(3)<---------HSFB2a(2) xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxx>smallRNA(fl3) --------->ANAC46   --------->ANAC58     <---------At4g35610 xxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->ANAC58 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxsmallRNA(s2)   --------->ANAC58<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      --------->At4g35610 xxxxxxxxxxxxxxxxxxsmallRNA(i2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(l2) x>smallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)---------->DOF2 xxxxxxxxxxxxxxxxsmallRNA(fl3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxsmallRNA(i)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -ANAC55(2) <xxxxxxxxxxxxxxxxsmallRNA(i)     <---------TOE1(2) <---------LBD16     xxxxxxxxxxxxxxxxxx xxxxxxxxsmallRNA(fl3)--------->ARR14(2)   <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   gcatcagaaccgtctctaagagcagaatctcctctccaagtaactctttggttcggaggcaattttccagaacgttgagcttcgaaatacaaaagactgt  18398100                                                                       <---------ANAC55(2)     <-----                                           <---------ETT(2)            <---------ANAC58       <------ZmHOX2a(2)                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   <-------                                     --------->ANAC58               --------->ARR14(2)       --------               --------->ATHB51      --------->ANAC46               <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               --------->AtLEC2  --------->ANAC58        --------->At4g35610          --------->ANAC58     --------->ZAT6         --------->ANAC58     <---------At4g35610     --------->At4g35610        <-----------GT1<---------ANAC58      <------- xxx>smallRNA(se3)           <---------At4g35610   <---------YAB1   <---------ARR14(2)       --------   ttttgagagcttctgcataatttgtagagacagcttcacgagccatcgacattactattaacacaatgcaaatacttgtccataagcattgtgaagatcc  18398200                               <---------ICU4      xxxxxxxxxxxxxxxx>smallRNA(i)   ------------>CBF                  <---------DAG2 --TEIL                    --------->AHL20(2)               <------------CBF --ARR11(3)                <---------AHL20(2)            ------------>CBF   <---------ANAC58 ->ARR11(3)               <---------ATHB12          <------------CBF   <----------DOF2 --ARR14(2)             --------->WOX13(1)       ------------>CBF   <-----------GT1 ->ARR14(2)           ------------>CBF      <xxxxxxxxxxxxxxxxsmallRNA(i)    <---------ANAC58   atttttcaattgagacattgttttttcaattaatctttagacaatctcaagaccaattgtacaattgattttactttttcttgtgtttggcatatgtcta  18398300                                                                 --------->AHL20(2)                   --------->GLK1(2)                  <---------ANAC58           <-----------RAV1(1)                  <---------GLK1(2)                   <---------ANAC58          --------->ARR11(3)           <---------AHL20(2)                       <------ZmHOX2a(1)    --------->At4g35610         <-----------TBP                          <---------TOE2(3)      <---------At4g35610       <---------------AGL15               <---------ANAC58      <---------AHL20(2)       --------------->AGL15               <---------ANAC58     --------->AHL20(2)              <----   tgtattcaactatttatagagaatctatataagatggagtccatggctagttaaggacttgctcaaaaaaattttagctaaatatgttgtattcaactaa  18398400                                                                                  <---------TOE1(2)                                                                                 ------>ZmHOX2a(1)                                                                             --------->ARR14(2)                                                                   <-----------ARR10                                                                   --------->AHL20(1)                                                                   <---------ARR11(3)                                                                   --------->ARR11(3)                             <----------DOF2                       <---------AHL20(1)            <---------At4g35610                                   --------->CCA1(1)  --------->ZAT14            --------->At4g35610    --------->ARR11(3)             --------->RVE1(1)  <---------ZAT14 -----TOE2(3)     <----------DOF2  <---------ARR11(3)<------------CBF        <---------ARR14(2)   ---   gaattaagagttttagatgactttgggttttctttaaaatctcatgttattcaaatattgagttctaaatatctttccaaatcctagtttactgaacatg  18398500                                                         ---------->DOF2                                                      --------->YAB1                                                  --------->ATHB12                                               --------->WOX13(1)                                               <-----------GT1                                              --------->AHL20(2)                                              <---------AHL20(2)                                 <---------ANAC58 <--------HAHB4                                 <---------ANAC58 <---------ICU4                   --------->YAB1                         --------->YAB1    --------->WOX13(1)                 <---------YAB1             --------->WOX13(1)--------->ARR11(3)<---------ATHB12    --------->GLK1(1)        -------    ----------->GT1 <---------ATHB12      <---------AHL20(2)         <---------GLK1(1)   --------->AHL20(2) ---->TEIL <---------ATHB12 <---------GLK1(2)<---------ATHB12   --------->At4g35610<-----------GT1   aaacttatgtaaaatcattcaaatcatttagaatttcttgttattcaattaatcatttataaagtcatatgaaatccattgttattcacaatttcataaa  18398600          --------->ARR11(3)          <---------ARR11(3)             <---------At5g28300      ----------->GT1     --------->CCA1(2)      ---------->DOF2             <----------DOF2             --------->YAB1      --------->HSFB2a(2)    <---------TOE2(3) <------ZmHOX2a(1) <-----------GT1      <---------ZAT6  ------->TEIL    <------- -->AHL20(2) <----------DOF2---------->DOF2                ----------->GT1  <---------ALFIN1---------   tttgttaagaaagagctttggaaaggattttaaagactttatttacagttttagttgaaaatagtgataagaaaaatcgcacctctagatagggatgtca  18398700  Previous    Next  AGI:  At2g44550.1    Description:  ATGH9B10 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B10); hydrolase, hydrolyzing O-glycosyl compounds. Identical to Endoglucanase 13 precursor [Arabidopsis Thaliana] (GB:O64890); similar to ATGH9B12 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B12), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G44570.1); similar to ATGH9B11 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B11), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G44560.1); similar to ATGH9B9 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B9), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G44540.1); similar Range:  from: 18396457    to: 18398218    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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