Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->TCP15(1)        <---------O2                         --------->TCP16(1)        --------->O2                         <---------PCF2        --------->TGA1a                      --------->PCF5        <---------TGA1a                      --------->ZAT18        =====================MYC_MYB        ----------->TCP11(1)      <---------ALFIN1                      <---------TCP15(2)     <---------ZAT18                       <---------MYB46(3)    --------->PCF5                        --------->ALFIN1                       --------->STY1(2)   <------NtERF2                        <---------MYB46(3)                       <---------STY1(2)   <---------PCF5                      --------->ALFIN1                          <---------ZAT2   --------->PCF2                     ------->PIF5                              --------->ANAC46    <  ------>NtERF2                       <-------PIF5                              --------->ANAC58   <-  <---------ATERF1(1)              <---------ANAC58                             --------->ANAC58  <--  <-----------TCP11(1)         <---------ANAC58                       <-----------RAV1(1)         --- --------->ALFIN1 <----------CDC5  <---------ANAC58             <---------CCA1(2)--------->ZAT2   <-- ---->GLK1(2)  --------->ZAT18 <---------ANAC58             ------>ZmHOX2a(2) --------------------->WRI1   tcggtggcccacttgagagccctgagcgagtttccttgctcgtggtgggccctaagctctgatcccatctctatgttgctccaagctagcatcgtcgtag  18394800           --------->GLK1(1)           <---------GLK1(1)     ---------->DOF2                        <-----------GT1  --------->WOX13(1) --------->ANAC58                      --------->YAB1      <------ZmHOX2a(2)                    ----- --------->ANAC58                      ----------->GT1    --------->ARR11(3)                    ----- -----------------AGL1                <------NtERF2      --------->At4g35610                    ----- --------DOF5.7(2)                --------->LBD16     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      ----- -------ZAT18                     ------>NtERF2      <-----------HVH21            --------->MYB52(1) ------>ZAT14                    --------->ANAC46   --------->LBD16      <---------YAB1 <---------ZAT14 -------WRKY38(1)               <---------LBD16   <---------LBD16      <-----------GT1  --------->ZAT14   tgaacgctaaaggaaatccaaacttcatattgtctccggcatcgtaataccctccggtgagatcaatctatttttacaattagcaaacagtttacttcaa  18394900                                                                                           <---------                                                                                           <---------ARR14(2)                                                                                           --------->ARR14(2)                                                                                          <xxxxxxxxxx                                                                                          <---------GLK1(2)                                                                                          <xxxxxxxxxx                                                                                          --------->ARR14(2)                                                                                      --------->ZAT18                                                                                      --------->ZAT14                                                                                      <---------ZAT18                                                                                      <---------ZAT14                                                                                     <xxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     <xxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                     xxxxxxxxxxxxxxxx                                                                                   <---------ANAC58                                                                                   <---------ANAC58                                                                                   <---------ANAC46                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                               <----------DOF2                                                                              <xxxxxxxxxxxxxxxxxxxxxx                                                                              <xxxxxxxxxxxxxxxxxxxxxx                                                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                            <xxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                          <---------HSFC1(2)                                                                          --------->HSFC1(2)                                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                      xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                    --------->At4g35610<xxxxxxxxxxxxx                                                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         --------->YAB1                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <---------ICU4                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        <-------TEIL                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <---------ICU4                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)--------->GLK1(2)  <---------AHL20(2)                     <---------AHL20(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->AHL20(2)                    --------->ANAC55(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) --------->ICU4                    --------->YAB1    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------ARR14(2) ---->ANAC55(2)                  --------->AHL20(2)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)xxxxxxxxxxxx ---->ANAC46               ----------->GT1--------->ATHB12    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) ---->ANAC58        --------->AHL20(2) <---------ANAC55(2)    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)---- ---->ANAC58    --------->ANAC46--------->YAB1       <-----------GT1<xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   gtaataaatattcattacacaaaaaaatatggaataaaaataagtaattggatattaaacttacatgagcatcagaaccatctttgagtgcagaatctcc  18395000             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <---------DAG2         --------->HSFC1(1)       xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxxxxxxxxxx>smallRNA(fl3)      <-----------GT1           <---------HSFC1(1)      ------->TEIL              <---------HSFB2a(2)   xxxxxxxxxxxxxxxxxxx>smallRNA(se3)   --------->AtLEC2             --------->HSFB2a(2)   --------->ANAC46      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --ARR10 <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxsmallRNA(i2)     <---------LBD16 xxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxsmallRNA(se3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxx>smallRNA(si3)   <------NtERF2 xxxxxxxsmallRNA(si3) --------->ANAC58     --------->At4g35610 xxxxxx>smallRNA(se3) --------->ANAC58     <---------At4g35610 xxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                 --------->HSFB2a(2) xx>smallRNA(l2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                 <---------HSFB2a(2) xsmallRNA(fl3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                    --------->At4g35610 xsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    <---------At4g35610 xxxxxxxxxxsmallRNA(se3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           --------->ARR11(3)       <--- xxxxxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <----------DOF2    --------->ATHB51 -->ZmHOX2a(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    ---------->DOF2 <---------ARR11(3)       ----   tctccatgtaactttttggttcggaggcaattttccagaacgttgagcttcaaaatacaaaagactcttttggagagcttctgcataatttgtagaaaca  18395100                                                               ------>ZmHOX2a(2)                                                               <-------TEIL                                                              <------ZmHOX2a(2)           <---------ETT(2)                                   --------->ARR14(1)     --------->ANAC58                  <---------ANAC58      --------->ARR11(3)     --------->ANAC46                  <---------ANAC55(2)   <---------ARR11(3)     --------->ANAC58                  <---------ANAC58      <---------ARR14(2)                 -----    <-------PIF5                    <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                      <----    ------->PIF5                    --------->ARR14(2)       --------->ARR14(2)               xxxxxxx   --------->ANAC46                 <---------ARR14(2)      <---------GLK1(1)             <---------YAB1 <---------ALFIN1              --------->AtLEC2            ----------->ARR10     --------->ARR11(3) ------At4g35610    <---------------AtSPL3       --------->ANAC58                <---------ARR11(3) ----->At4g35610    --------------->AtSPL8       --------->ANAC58 <---------MYB52(1)<----------DOF2   gctccacgagccatcgacattactagtaccacaatgcaaatacttgtccataagcattgtgaagatccgtttttcgattgagacatctttttttgataaa  18395200                        ------------>CBF           <xxxxxxxxxxxxxxxxsmallRNA(i)     <---------ANAC46                                 <-------         ------>ZmHOX2a(2)                  <---------ANAC58                          <---------AHL20(2)        <------ZmHOX2a(2)                   <---------ANAC58                      <---------------AGL15       --------->ARR11(3)             <----------DOF2                             --------------->AGL15       <---------ARR11(3)      --------->ARR11(3)                              <-----------GT1------- ---->ARR11(3)     <------------CBF   <---------DAG2               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) -----ARR11(3)  ------------>CBF   <-----------GT1               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxx>smallRNA(fl3) <---------ARR11(3)      <---------AtLEC2 ------->TEIL<-----------TBP--   tctttagacgatctcaagaccaattgtacaatagattttactttttgcttgtgttttggatgtctatgtctatgtatgtattcactatttatagagaatc  18395300                                           --------->AHL20(1)                             <---------ANAC58    -------->HAHB4           <---------ANAC58    --------->ATHB12       <------ZmHOX2a(1)     --------->At4g35610 --GLK1(2)             ---------->DOF2     --------->AHL20(2)                                 <------ -->GLK1(2)  <xxxxxxxxxxxxxxxxsmallRNA(i)  <---------AHL20(2)                   <---------TOE2(3) --------->TBP    <---------ANAC46        --------->AHL20(2)         <---------MYB52(1)<---------TOE2(3)   tataaatgatggagtccatggctagtaaaggacttgctcaaaaaaaaaattagctaaaaatgttgtaatctgttattcaactaagaattaagaattttag  18395400                                                                  <---------TOE1(2)                                                                 ------>ZmHOX2a(1)                                                             <---------ARR14(2)                                                   --------->ARR11(3)                                                   <-----------ARR10                                                   <---------ARR11(3)                      ----------                   <---------ARR11(3)              <---------AHL20(1)                     --------->MYB59                   --------->ARR11(3)              --------->AHL20(1)                     <---------TOE2(2)             --------->TOE2(3)                    --------->RVE1(1)                       <---------TOE2(3)  <----------DOF2 --------->RVE1(1)               --------->CCA1(1)   <---------------AtSPL8 ---HSFB2a(2)<----------DOF2         <------------CBF        --------->ARR14(2)      ------->TEIL   aagactttggtttttctttaatatctcatgttattcaaatattgagttctaaatatctttccaaatcctagtttagtactgaacatgaaacttaggtaaa  18395500                                    ---------->DOF2                                  <---------YAB1                                --------->YAB1                            <--------HAHB4                            --------->ATHB12                                                     ----           <---------ANAC58 <---------ICU4                                                    <------           <---------ANAC58--------->ICU4       --------->GLK1(1)        <---------AHL20(2)   <------   <-----------GT1         <---------YAB1       <---------GLK1(1)     --------->TOE2(3)      <------- ->GT1  <----------DOF2  --------->YAB1    --------->At4g35610--------->YAB1         ---------->DOF2   atcatttacactttcttgttattcaaataatcatttataaaagtcatatgaaatccaatgttattcaaaatttcttaaatttcttaagaaagagtttcgg  18395600           <---------CCA1(1)                                                             <-----------HVH21           <---------RVE1(1)                                                            <---------bZIP60(1)          --------->ARR11(3)                                                            --------->bZIP60(1)          <---------ARR11(3)                                                        <---------ARR11(3) ----------->GT1     <-----------GT1                                                --------->ARR11(3) ------>DOF2         --------->YAB1                                                --------->YAB1 ---ANAC46<---------AHL20(1)                      <-----------GT1   <-----------HVH21 <---------ICU4 ---HSFB2a(2)    <---------AHL20(2)       ----------->GT1          ----------->GT1<---------YAB1 ---- --LBD16<---------TOE2(3)               ----------->GT1    --------->ATHB12     <---------At4g35610   aaagggttttaagatatttttaatcacaattttagttgaaaatagagaaaaatcacattcttgatagggatgtcaaatgggctgatgatcatgtcataga  18395700  Previous    Next  AGI:  At2g44540.1    Description:  ATGH9B9 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B9); hydrolase, hydrolyzing O-glycosyl compounds. Identical to Endoglucanase 12 precursor [Arabidopsis Thaliana] (GB:O64889); similar to ATGH9B12 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B12), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G44570.1); similar to ATGH9B11 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B11), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G44560.1); similar to ATGH9B10 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9B10), hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT2G44550.1); similar Range:  from: 18393295    to: 18395186    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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