Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <---------HSFB2a(2)                           --------->HSFB2a(2)                       <-------GAMYB                       <---------ANAC58                       <---------ANAC58                       <---------ANAC46                      <------MYB46(1)                      <------MYB83                      <---------MYB46(3)                      --------->MYB52(2)                      --------->MYB55(2)                     <---------AtMYB61                 --------->LBD16                  <---------MYB46(3)                  --------->LBD16                 <---------WOX13(1)           <---------MYB52(1)               --------->ATHB12               --------->At5g28300  <---------MYB52(1)    ------->TEIL              <---------YAB1                 --------->LBD16   <---------MYB52(1)     --------->ANAC58     --------->HSFB2a(2) <---------MYB46(3)  ----------->GT1  <-----------HVH21       --------->ANAC58 -ATHB12  --------->ARR11(3)               <---------LBD16  <-------TEIL            <---------AtLEC2   gaattgtccagagctcttgattgttggttgtggaagagacattcacccggtaactcccgaggtccgtcagtttgtcaagtcccttggcatgaaactagaa  18390200                                                                                               <-----                                                                                         --------->ATHB12                                                                                         <---------ICU4                                                                                        --------->ICU4                                                                                    --------->AHL20(1)                                                                                    <---------AHL20(2)                                                                                    <---------AHL20(1)                                                                                   --------->YAB1 <--                 --------->TOE2(3)                                                 --------->AHL20(2)          <---------MYB52(1)                          --------->ZAT2              <---------YAB1  ---        <---------HSFB2a(2)             <----------DOF2                <---------YAB1   <---------YAB1   acagttgattctgtaagtttcttaatccatttctacaggcttcttttctagtcccaagcttacttcataacttcttattcgcttattatattgattactt  18390300                                                                         <---------------AGL15                                                                     <---------ANAC58                                                               <------NtERF2                                                              --------->LBD16                                                              ------>NtERF2                                                            <---------At4g35610            ----------                                                            --------->At4g35610           ------>ZmHOX2a(1)                                                            <---------LBD16         <-------TEIL                                                         --------->At4g35610       <-----------GT1                               --------->GLK1(2)         --------->ZAT2  --------------->AGL15                         --------->SPL7                  <---------ZAT2 ----------------->AGL1 -----DOF2               <-------TEIL                    <---------At4g35610    ----------->GT1 -------AHL20(2)     --------------->AtSPL8          <---------MYB46(3) ----------------->AGL3     <- ------>AHL20(2)--------->REM1(1) <---------YAB1 <---------HSFB2a(1) <---------ANAC58    --------->TOE2(3)   ttaattcagagaaatgctgcatcaacgtacaacattctgaatgaagaaggaagagtcgttgctgcggcattgcttccatatggagttacatcctaaagaa  18390400                                                           <-----------GT1                                                    --------->LBD16                  <---------ANAC58                 --------->HSFB2a(2)                <---------ANAC58           <---------ZAT2                          <---------HSFB2a(2)                <---------ANAC58   --------->MYB46(3)        --------->At5g28300 ------>MYB46(1)                <---------YAB1 --------->MYB52(1)<----------DOF2               ------>MYB83                   <---------AHL20(2) >DOF2     --------->ZAT2   ----------->GT1  --------->ARR11(3)        <---------At4g35610       ---- --------MYB52(2) <---------ANAC58           <---------ARR11(3) <---------GLK1(2)     <---------ANAC46   aactaacaactcgagctctggctttctaaactgtaaatggtttttgagaccttccgaaaataaaccgaatttcatcggagtttttattgcgtttgagcta  18390500                                                             <---------ARR11(3)                                                             --------->ARR11(3)                                                            --------->RVE1(1)                                                            --------->CCA1(1)         ----------->GT1                                --------->AHL20(2)                 *TSS    --------->MYB52(1)              --------->GLK1(1)  --------->CCA1(2)              <---------ATHB12  <---------MYB52(2)                <---------CCA1(2) <---------ARR11(3)            --------->WOX13(1)  --------->MYB46(3)     <---------DAG2               --------->ARR11(3)   <-----------RAV1(1)   <--- ------->TBP             <----------DOF2      ------>ZmHOX2a(1)    --------->LBD16------------>CBF---   tataacaaacgttgtaacatggtgcgactttatctcgcatttctcatccttccaaagatataatatctccagagactatgttgtatcaatgaatgagatt  18390600                                             --------->MYB52(2)                                             --------->MYB46(2)                                           <---------MYB52(1)                                        <---------ANAC46                                        <---------TOE2(3)                                     <---------MYB52(1)            <---------At5g28300 --------->GLK1(1)   --------->ARR14(2)           <---------GLK1(1)   <---------ARR14(2)        ------->GAMYB <--------P                                  >>>>>>>>>TBF1   --------->GLK1(2)       <---------LBD16<-------GAMYB                          <---------TOE2(3)  <---------GLK1(2)       --------->MYB52(1) ----------->GT1                   ---------->DOF2 ------AHL20(2)           <-----------GT1 --------->At5g28300                 <---------AHL20(2) ------->DOF2        <---------AHL20(2) <---------TOE1(3)               <---------ANAC46  >>>>>>>>>TBF1   taaagaatctgaattacagttatatttttaacggaaatcgttacggttagttaaaaacttagaaatgagtttttgagtatataaaggaagaagaagaaga  18390700                                                                                                  ---                                 --------->LBD16                                           <-------TEIL                                <---------ANAC46                                           ------>ZmHOX2a(2)                               <---------LBD16                                            <------ZmHOX2a(2)                          <---------ARR11(1)                                             --------->ARR14(2)                          ------->TEIL  >>>>>>>>>TBF1                                <---------LBD16                          --------->ARR14(2)                                --------->RVE1(1)     <--                      <-------TEIL<------NtERF2                      --------->TOE1(3)   <---------ARR14(2)         <---------ANAC58 <---------ARR14(2)            <----------DOF2    --------->ARR11(3)     <--         <---------ANAC46<---------CCA1(2)     ---------->DOF2       --------->TOE2(3) --------->LBD16         <---------ANAC58<---------ARR14(1)>>>>>>>>>TBF1<---------DAG2     <---------ARR11(3)     ---   gagagtcattttcttgtagtcaaattcgtatctcgcggggaagaagaagaaaagactgctttttctcaaaaccctaaaatctctctctccggatccattt  18390800                                               <---------ARR11(3)                                          ------>NtERF2          <------NtERF2                --------->LBD16        <---------ANAC46               ------>NtERF2<---------DEAR3(1)                <---------MYB52(1)        <---------ANAC58              --------->ANAC46                              <---------ANAC58        <---------ANAC58              --------->LBD16--------->LBD16                <---------ANAC58 ------>HSFC1(1)                 <----------DOF2   <---------LBD16         <------NtERF2 -------HSFB2a(2)      ------->GAMYB <---------LBD16--------->ANAC46       ------>NtERF2        ----- -------HSFC1(1)       --------->AtMYB61<------NtERF2------>NtERF2       --------->SPL7    <---------GLK1(1) ------>HSFB2a(2)     --------->MYB46(3)--------->RAP2.3(1)            <---------SPL7<---------SPL7   ctcgaacatggcgtctattgttcaaccatcgcctactttcccggcgctaaatctccggcgttcttctctgattcgtccgccttcttccgttcgatttcct  18390900                                         <----------DOF2        <-----------GT1             ------->TEIL                                       <---------YAB1       <---------DAG2         <---------ARR14(2)                                      <---------ARR11(3)    <----------DOF2        --------->ARR14(2)                                      --------->ARR11(3) <-----------GT1           ------->TEIL                                      <-----------GT1 --------------->AtSPL8       --------->GLK1(2)                                     --------->YAB1   <---------------AtSPL8      <---------CCA1(2) ->ZmHOX2a(1)                  ------>NtERF2         ----------------------->TaNAC69(2)--------->At4g35610   cttgtaagtctcatctacttctctcactctctccgactattatctttctattggtatttgtactttatacggtcttcttcgctcgaatctgatgaatctt  18391000                                                      --------->LBD16                                                    --------------->AtSPL8                                                    --------------->AtSPL3                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                                  --------->GLK1(2)                                                  --------->ARR14(2)                   <---------MYB46(3)             ------------------>SPL14                 <---------ANAC58                 <---------ARR14(2)           ------>NtERF2                 <---------ANAC46                <------NtERF2          --------->ARR14(2)                 <-------GAMYB                   --------->ATERF1(1)    <---------ARR14(2)                 <---------ANAC58               <---------ATERF1(1)    <------NtERF2                --------->MYB52(2)              <---------MYB46(3)    --------->LBD16                <---------MYB46(3)             <---------ANAC46      <---------ANAC46                <------MYB46(1)                <---------DEAR3(1)   <------NtERF2                <------MYB83                  ------>NtERF2         <---------LBD16                --------->MYB55(2)            <---------LBD16      <---------ATERF1(1)               <---------AtMYB61              <------NtERF2        <---------RAP2.3(1)              <---------MYB52(1)            <---------DEAR3(1)     ------>NtERF2  <---------DEAR3(2)             <-------GAMYB                 <---------LBD16        <---------RAP2.3(3)        --------            <-----------RAV1(1)           <---------bZIP60(2)     <---------DEAR3(1)         <------- --------->HSFB2a(2)          ---------->DOF2<---------ATERF1(1)  <---------RAP2.3(2)     <---------At4g35610   gttctcgattgtttctgttggttgtggaattgaaaagaagtgtaacgcggcggatccgtacaagttcgacggcggaaactctgccggtttccatctgctt  18391100  Previous    Next  AGI:  At2g44525.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G60150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70445.1); contains InterPro domain Protein of unknown function DUF498 (InterPro:IPR007523) Range:  from: 18389146    to: 18390589    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g44530.1    Description:  ribose-phosphate pyrophosphokinase, putative / phosphoribosyl diphosphate synthetase, putative. Identical to Ribose-phosphate pyrophosphokinase 5 (PRS5) [Arabidopsis Thaliana] (GB:O64888;GB:Q8L7T8); similar to ribose-phosphate pyrophosphokinase 2 / phosphoribosyl diphosphate synthetase 2 (PRS2) [Arabidopsis thaliana] (TAIR:AT1G32380.1); similar to Ribose-phosphate pyrophosphokinase 1 (Phosphoribosyl pyrophosphate synthetase 1) (GB:Q9XG98); contains InterPro domain Phosphoribosyl pyrophosphate synthetase, conserved site; (InterPro:IPR000842); contains InterPro domain Phosphoribosyl pyrophosphokinase; (InterPro:IPR005946); contains InterPro do Range:  from: 18390591    to: 18393219    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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